RNA–Protein interactions for RNA: ENST00000350896.3

MSR1-202, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5 BASIC

Gene MSR1, Length 3,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-202ENST00000350896 ADCY5O95622 1261 aa8.27□□□□□ -1.08
MSR1-202ENST00000350896 MX1P20591 662 aa8.27□□□□□ -1.08
MSR1-202ENST00000350896 CASQ1P31415 396 aa8.27□□□□□ -1.08
MSR1-202ENST00000350896 KCNJ6P48051 423 aa8.27□□□□□ -1.08
MSR1-202ENST00000350896 CASC1Q6TDU7 716 aa8.27□□□□□ -1.08
MSR1-202ENST00000350896 SUGP1Q8IWZ8 645 aaKnown RBP8.27□□□□□ -1.08
MSR1-202ENST00000350896 SMC4Q9NTJ3 1288 aa8.27□□□□□ -1.08
MSR1-202ENST00000350896 TRIM6-TRIM34B2RNG4 842 aa8.27□□□□□ -1.09
MSR1-202ENST00000350896 NOL10Q9BSC4 688 aaKnown RBP8.27□□□□□ -1.09
MSR1-202ENST00000350896 TRIM34Q9BYJ4 488 aa8.27□□□□□ -1.09
MSR1-202ENST00000350896 TRAPPC8Q9Y2L5 1435 aa8.27□□□□□ -1.09
MSR1-202ENST00000350896 SPDYE4A6NLX3 237 aa8.27□□□□□ -1.09
MSR1-202ENST00000350896 RPS6KA5O75582 802 aa8.27□□□□□ -1.09
MSR1-202ENST00000350896 RLBP1P12271 317 aa8.27□□□□□ -1.09
MSR1-202ENST00000350896 INTS3Q68E01 1043 aaKnown RBP8.27□□□□□ -1.09
MSR1-202ENST00000350896 ATF7IPQ6VMQ6 1270 aa8.27□□□□□ -1.09
MSR1-202ENST00000350896 TBC1D9Q6ZT07 1266 aa8.27□□□□□ -1.09
MSR1-202ENST00000350896 RBM28Q9NW13 759 aaKnown RBP8.27□□□□□ -1.09
MSR1-202ENST00000350896 ZNF518AQ6AHZ1 1483 aa8.27□□□□□ -1.09
MSR1-202ENST00000350896 CALRP27797 417 aaKnown RBP8.26□□□□□ -1.09
MSR1-202ENST00000350896 TNNT3P45378 269 aaPredicted RBP8.26□□□□□ -1.09
MSR1-202ENST00000350896 ATP6V1DQ9Y5K8 247 aa8.26□□□□□ -1.09
MSR1-202ENST00000350896 RAD51AP2Q09MP3 1159 aa8.26□□□□□ -1.09
MSR1-202ENST00000350896 JPH4Q96JJ6 628 aa8.26□□□□□ -1.09
MSR1-202ENST00000350896 IVLP07476 585 aa8.26□□□□□ -1.09
MSR1-202ENST00000350896 NBPF20Q3BBV1 942 aa8.26□□□□□ -1.09
MSR1-202ENST00000350896 GRIPAP1Q4V328 841 aa8.26□□□□□ -1.09
MSR1-202ENST00000350896 HOMEZQ8IX15 550 aa8.26□□□□□ -1.09
MSR1-202ENST00000350896 FUCA2Q9BTY2 467 aa8.26□□□□□ -1.09
MSR1-202ENST00000350896 UBXN6Q9BZV1 441 aa8.26□□□□□ -1.09
MSR1-202ENST00000350896 PTCH1Q13635 1447 aa8.26□□□□□ -1.09
MSR1-202ENST00000350896 WDR33Q9C0J8 1336 aaKnown RBP8.25□□□□□ -1.09
MSR1-202ENST00000350896 EFCAB6Q5THR3 1501 aa8.25□□□□□ -1.09
MSR1-202ENST00000350896 DISP1Q96F81 1524 aa8.25□□□□□ -1.09
MSR1-202ENST00000350896 GTF2A1P52655 376 aaPredicted RBP8.25□□□□□ -1.09
MSR1-202ENST00000350896 USP26Q9BXU7 913 aa8.25□□□□□ -1.09
MSR1-202ENST00000350896 ZDHHC9Q9Y397 364 aa8.25□□□□□ -1.09
MSR1-202ENST00000350896 RTL1A6NKG5 1358 aa8.25□□□□□ -1.09
MSR1-202ENST00000350896 PTPRCP08575 1304 aa8.25□□□□□ -1.09
MSR1-202ENST00000350896 DHX16O60231 1041 aaKnown RBP8.25□□□□□ -1.09
MSR1-202ENST00000350896 H2AFXP16104 143 aaPredicted RBP8.25□□□□□ -1.09
MSR1-202ENST00000350896 RBM6P78332 1123 aaKnown RBP8.25□□□□□ -1.09
MSR1-202ENST00000350896 GOLGA5Q8TBA6 731 aa8.25□□□□□ -1.09
MSR1-202ENST00000350896 MED4Q9NPJ6 270 aa8.25□□□□□ -1.09
MSR1-202ENST00000350896 A0A1B0GUL7 405 aa8.25□□□□□ -1.09
MSR1-202ENST00000350896 SOX12O15370 315 aa8.25□□□□□ -1.09
MSR1-202ENST00000350896 CPP00450 1065 aa8.25□□□□□ -1.09
MSR1-202ENST00000350896 UBE2HP62256 183 aa8.25□□□□□ -1.09
MSR1-202ENST00000350896 SRRTQ9BXP5 876 aaKnown RBP8.25□□□□□ -1.09
MSR1-202ENST00000350896 CEP83Q9Y592 693 aa8.25□□□□□ -1.09
MSR1-202ENST00000350896 MCCP23508 829 aa8.24□□□□□ -1.09
MSR1-202ENST00000350896 CCDC91Q7Z6B0 441 aa8.24□□□□□ -1.09
MSR1-202ENST00000350896 OSCARQ8IYS5 282 aa8.24□□□□□ -1.09
MSR1-202ENST00000350896 PLCD3Q8N3E9 789 aa8.24□□□□□ -1.09
MSR1-202ENST00000350896 FAM107BQ9H098 131 aa8.24□□□□□ -1.09
MSR1-202ENST00000350896 ARGLU1Q9NWB6 273 aaPredicted RBP8.24□□□□□ -1.09
MSR1-202ENST00000350896 CD2BP2O95400 341 aaKnown RBP8.24□□□□□ -1.09
MSR1-202ENST00000350896 GSCP56915 257 aaPredicted RBP8.24□□□□□ -1.09
MSR1-202ENST00000350896 CEP89Q96ST8 783 aa8.24□□□□□ -1.09
MSR1-202ENST00000350896 DONSONQ9NYP3 566 aa8.24□□□□□ -1.09
MSR1-202ENST00000350896 SETBP1Q9Y6X0 1596 aa8.24□□□□□ -1.09
MSR1-202ENST00000350896 FAM135BQ49AJ0 1406 aa8.24□□□□□ -1.09
MSR1-202ENST00000350896 CCDC172P0C7W6 258 aa8.23□□□□□ -1.09
MSR1-202ENST00000350896 HNRNPH2P55795 449 aaKnown RBP8.23□□□□□ -1.09
MSR1-202ENST00000350896 TUBB4BP68371 445 aa8.23□□□□□ -1.09
MSR1-202ENST00000350896 RAI14Q9P0K7 980 aa8.23□□□□□ -1.09
MSR1-202ENST00000350896 TRPM2O94759 1503 aa8.23□□□□□ -1.09
MSR1-202ENST00000350896 CHD1O14646 1710 aa8.23□□□□□ -1.09
MSR1-202ENST00000350896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.23□□□□□ -1.09
MSR1-202ENST00000350896 CFDP1Q9UEE9 299 aaPredicted RBP8.23□□□□□ -1.09
MSR1-202ENST00000350896 KIF3CO14782 793 aa8.23□□□□□ -1.09
MSR1-202ENST00000350896 LMOD3Q0VAK6 560 aa8.23□□□□□ -1.09
MSR1-202ENST00000350896 EXOC4Q96A65 974 aa8.23□□□□□ -1.09
MSR1-202ENST00000350896 AK7Q96M32 723 aa8.23□□□□□ -1.09
MSR1-202ENST00000350896 CARD10Q9BWT7 1032 aa8.23□□□□□ -1.09
MSR1-202ENST00000350896 L2HGDHQ9H9P8 463 aa8.23□□□□□ -1.09
MSR1-202ENST00000350896 ERCC6L2Q5T890 1561 aa8.23□□□□□ -1.09
MSR1-202ENST00000350896 CDC42BPGQ6DT37 1551 aa8.23□□□□□ -1.09
MSR1-202ENST00000350896 AATKQ6ZMQ8 1374 aa8.22□□□□□ -1.09
MSR1-202ENST00000350896 RPAP1Q9BWH6 1393 aaPredicted RBP8.22□□□□□ -1.09
MSR1-202ENST00000350896 APPP05067 770 aa8.22□□□□□ -1.09
MSR1-202ENST00000350896 SATB1Q01826 763 aa8.22□□□□□ -1.09
MSR1-202ENST00000350896 CNKSR2Q8WXI2 1034 aa8.22□□□□□ -1.09
MSR1-202ENST00000350896 MAGEA9P43362 315 aa8.22□□□□□ -1.09
MSR1-202ENST00000350896 FBXO18Q8NFZ0 1043 aa8.22□□□□□ -1.09
MSR1-202ENST00000350896 PLEKHG2Q9H7P9 1386 aa8.22□□□□□ -1.09
MSR1-202ENST00000350896 CCDC196A0A1B0GTZ2 297 aa8.22□□□□□ -1.09
MSR1-202ENST00000350896 HSP90AB3PQ58FF7 597 aa8.22□□□□□ -1.09
MSR1-202ENST00000350896 FILIP1Q7Z7B0 1213 aa8.22□□□□□ -1.09
MSR1-202ENST00000350896 KCNF1Q9H3M0 494 aa8.22□□□□□ -1.09
MSR1-202ENST00000350896 ATG3Q9NT62 314 aa8.22□□□□□ -1.09
MSR1-202ENST00000350896 BSDC1Q9NW68 430 aaPredicted RBP8.22□□□□□ -1.09
MSR1-202ENST00000350896 RGS12O14924 1447 aa8.22□□□□□ -1.09
MSR1-202ENST00000350896 FANCAO15360 1455 aa8.22□□□□□ -1.09
MSR1-202ENST00000350896 CCP110O43303 1012 aa8.21□□□□□ -1.09
MSR1-202ENST00000350896 SLU7O95391 586 aaKnown RBP8.21□□□□□ -1.09
MSR1-202ENST00000350896 NYAP1Q6ZVC0 841 aa8.21□□□□□ -1.09
MSR1-202ENST00000350896 CDC42BPBQ9Y5S2 1711 aa8.21□□□□□ -1.09
MSR1-202ENST00000350896 SAMD9LQ8IVG5 1584 aa8.21□□□□□ -1.09
MSR1-202ENST00000350896 CCDC192P0DO97 292 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms