RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 HDGFL2Q7Z4V5 671 aaPredicted RBP22.45■■□□□ 1.18
COPE-202ENST00000349893 A0A1W2PP64 1363 aa22.44■■□□□ 1.18
COPE-202ENST00000349893 ATP10DQ9P241 1426 aa22.43■■□□□ 1.18
COPE-202ENST00000349893 SLC12A5Q9H2X9 1139 aa22.43■■□□□ 1.18
COPE-202ENST00000349893 ADCY9O60503 1353 aa22.42■■□□□ 1.18
COPE-202ENST00000349893 COL23A1Q86Y22 540 aaPredicted RBP22.42■■□□□ 1.18
COPE-202ENST00000349893 SYTL4Q96C24 671 aaPredicted RBP22.42■■□□□ 1.18
COPE-202ENST00000349893 PUS7Q96PZ0 661 aaKnown RBP22.42■■□□□ 1.18
COPE-202ENST00000349893 CCNL1Q9UK58 526 aaPredicted RBP22.42■■□□□ 1.18
COPE-202ENST00000349893 MEGF6O75095 1541 aa22.41■■□□□ 1.18
COPE-202ENST00000349893 TERF2IPQ9NYB0 399 aa22.4■■□□□ 1.18
COPE-202ENST00000349893 ZCRB1Q8TBF4 217 aaKnown RBP22.39■■□□□ 1.17
COPE-202ENST00000349893 TMC1Q8TDI8 760 aa22.39■■□□□ 1.17
COPE-202ENST00000349893 SIN3AQ96ST3 1273 aa22.39■■□□□ 1.17
COPE-202ENST00000349893 CD2APQ9Y5K6 639 aa22.39■■□□□ 1.17
COPE-202ENST00000349893 C5P01031 1676 aa22.39■■□□□ 1.17
COPE-202ENST00000349893 RGPD2P0DJD1 1756 aa22.38■■□□□ 1.17
COPE-202ENST00000349893 USP47Q96K76 1375 aa22.38■■□□□ 1.17
COPE-202ENST00000349893 MAP3K19Q56UN5 1328 aa22.37■■□□□ 1.17
COPE-202ENST00000349893 HOXC9P31274 260 aa22.37■■□□□ 1.17
COPE-202ENST00000349893 LTV1Q96GA3 475 aaPredicted RBP22.37■■□□□ 1.17
COPE-202ENST00000349893 CGNL1Q0VF96 1302 aa22.35■■□□□ 1.17
COPE-202ENST00000349893 TAF1LQ8IZX4 1826 aa22.35■■□□□ 1.17
COPE-202ENST00000349893 HMGB2P26583 209 aaKnown RBP22.34■■□□□ 1.17
COPE-202ENST00000349893 GPBP1L1Q9HC44 474 aaPredicted RBP22.34■■□□□ 1.17
COPE-202ENST00000349893 RTL1A6NKG5 1358 aa22.34■■□□□ 1.17
COPE-202ENST00000349893 MSH5O43196 834 aa22.33■■□□□ 1.17
COPE-202ENST00000349893 HSPA6P17066 643 aa22.33■■□□□ 1.17
COPE-202ENST00000349893 MSL1Q68DK7 614 aa22.33■■□□□ 1.17
COPE-202ENST00000349893 FLAD1Q8NFF5 587 aa22.33■■□□□ 1.17
COPE-202ENST00000349893 CARD11Q9BXL7 1154 aa22.32■■□□□ 1.16
COPE-202ENST00000349893 COG3Q96JB2 828 aa22.31■■□□□ 1.16
COPE-202ENST00000349893 TOGARAM1Q9Y4F4 1720 aa22.29■■□□□ 1.16
COPE-202ENST00000349893 AMPHP49418 695 aa22.29■■□□□ 1.16
COPE-202ENST00000349893 NBPF6Q5VWK0 638 aa22.29■■□□□ 1.16
COPE-202ENST00000349893 NBPF4Q96M43 638 aa22.29■■□□□ 1.16
COPE-202ENST00000349893 C4BP0C0L5 1744 aa22.28■■□□□ 1.16
COPE-202ENST00000349893 NEUROD1Q13562 356 aa22.28■■□□□ 1.16
COPE-202ENST00000349893 PALLDQ8WX93 1383 aa22.27■■□□□ 1.16
COPE-202ENST00000349893 FBLN1P23142 703 aa22.27■■□□□ 1.16
COPE-202ENST00000349893 UBR3Q6ZT12 1888 aa22.26■■□□□ 1.15
COPE-202ENST00000349893 CICQ96RK0 1608 aaPredicted RBP22.25■■□□□ 1.15
COPE-202ENST00000349893 RAPGEF4Q8WZA2 1011 aa22.24■■□□□ 1.15
COPE-202ENST00000349893 TESK2Q96S53 571 aa22.24■■□□□ 1.15
COPE-202ENST00000349893 PCDH11XQ9BZA7 1347 aa22.24■■□□□ 1.15
COPE-202ENST00000349893 PCDH11YQ9BZA8 1340 aa22.24■■□□□ 1.15
COPE-202ENST00000349893 AMIGO3Q86WK7 504 aa22.23■■□□□ 1.15
COPE-202ENST00000349893 IGSF1Q8N6C5 1336 aa22.23■■□□□ 1.15
COPE-202ENST00000349893 NSD3Q9BZ95 1437 aa22.23■■□□□ 1.15
COPE-202ENST00000349893 ITGB4P16144 1822 aa22.22■■□□□ 1.15
COPE-202ENST00000349893 SMG6Q86US8 1419 aaKnown RBP22.22■■□□□ 1.15
COPE-202ENST00000349893 KIF3CO14782 793 aa22.21■■□□□ 1.15
COPE-202ENST00000349893 TATP17735 454 aaPredicted RBP22.21■■□□□ 1.15
COPE-202ENST00000349893 USHBP1Q8N6Y0 703 aa22.21■■□□□ 1.15
COPE-202ENST00000349893 ZNF526Q8TF50 670 aaPredicted RBP22.21■■□□□ 1.15
COPE-202ENST00000349893 MAP2P11137 1827 aaKnown RBP22.21■■□□□ 1.15
COPE-202ENST00000349893 RRS1Q15050 365 aaKnown RBP22.2■■□□□ 1.14
COPE-202ENST00000349893 SMARCC1Q92922 1105 aaPredicted RBP22.2■■□□□ 1.14
COPE-202ENST00000349893 INSRP06213 1382 aa22.2■■□□□ 1.14
COPE-202ENST00000349893 PKD1L3Q7Z443 1732 aa22.2■■□□□ 1.14
COPE-202ENST00000349893 CYP27B1O15528 508 aa22.19■■□□□ 1.14
COPE-202ENST00000349893 KIF24Q5T7B8 1368 aa22.19■■□□□ 1.14
COPE-202ENST00000349893 MPRIPQ6WCQ1 1025 aa22.18■■□□□ 1.14
COPE-202ENST00000349893 AK7Q96M32 723 aa22.18■■□□□ 1.14
COPE-202ENST00000349893 FYB1O15117 783 aa22.17■■□□□ 1.14
COPE-202ENST00000349893 SLC24A1O60721 1099 aa22.17■■□□□ 1.14
COPE-202ENST00000349893 SSFA2P28290 1259 aa22.17■■□□□ 1.14
COPE-202ENST00000349893 NCAPD2Q15021 1401 aa22.16■■□□□ 1.14
COPE-202ENST00000349893 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.16■■□□□ 1.14
COPE-202ENST00000349893 KIF13BQ9NQT8 1826 aa22.15■■□□□ 1.14
COPE-202ENST00000349893 FLT4P35916 1363 aa22.15■■□□□ 1.14
COPE-202ENST00000349893 NKX1-1Q15270 411 aaPredicted RBP22.15■■□□□ 1.14
COPE-202ENST00000349893 KIAA1551Q9HCM1 1747 aa22.14■■□□□ 1.14
COPE-202ENST00000349893 HSP90AB2PQ58FF8 381 aa22.14■■□□□ 1.13
COPE-202ENST00000349893 ST20-MTHFSA0A0A6YYL1 179 aa22.13■■□□□ 1.13
COPE-202ENST00000349893 APLP1P51693 650 aa22.13■■□□□ 1.13
COPE-202ENST00000349893 PIGBQ92521 554 aa22.13■■□□□ 1.13
COPE-202ENST00000349893 PHF14O94880 888 aa22.12■■□□□ 1.13
COPE-202ENST00000349893 DNAJC5GQ8N7S2 189 aa22.12■■□□□ 1.13
COPE-202ENST00000349893 GGNBP2Q9H3C7 697 aa22.12■■□□□ 1.13
COPE-202ENST00000349893 PXDNLA1KZ92 1463 aa22.11■■□□□ 1.13
COPE-202ENST00000349893 SMIM5Q71RC9 77 aa22.11■■□□□ 1.13
COPE-202ENST00000349893 LINC00116Q8NCU8 138 aa22.11■■□□□ 1.13
COPE-202ENST00000349893 LOC102724428A0A0B4J2F2 783 aa22.1■■□□□ 1.13
COPE-202ENST00000349893 SIK1P57059 783 aa22.1■■□□□ 1.13
COPE-202ENST00000349893 WWC3Q9ULE0 1092 aa22.1■■□□□ 1.13
COPE-202ENST00000349893 KIF20BQ96Q89 1820 aa22.1■■□□□ 1.13
COPE-202ENST00000349893 TOMM70O94826 608 aa22.09■■□□□ 1.13
COPE-202ENST00000349893 ANKRD26Q9UPS8 1709 aa22.07■■□□□ 1.12
COPE-202ENST00000349893 TGFB2P61812 414 aa22.06■■□□□ 1.12
COPE-202ENST00000349893 ITPK1Q13572 414 aa22.06■■□□□ 1.12
COPE-202ENST00000349893 TONSLQ96HA7 1378 aa22.06■■□□□ 1.12
COPE-202ENST00000349893 C10orf71Q711Q0 1435 aa22.06■■□□□ 1.12
COPE-202ENST00000349893 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.05■■□□□ 1.12
COPE-202ENST00000349893 N4BP2Q86UW6 1770 aaPredicted RBP22.04■■□□□ 1.12
COPE-202ENST00000349893 ZNF831Q5JPB2 1677 aa22.04■■□□□ 1.12
COPE-202ENST00000349893 GNPATO15228 680 aa22.04■■□□□ 1.12
COPE-202ENST00000349893 MMP10P09238 476 aa22.04■■□□□ 1.12
COPE-202ENST00000349893 SPG7Q9UQ90 795 aa22.04■■□□□ 1.12
COPE-202ENST00000349893 BRCA1P38398 1863 aaKnown RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms