RNA–Protein interactions for RNA: ENST00000349721.7

SMARCA2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-203ENST00000349721 CCT4P50991 539 aaKnown RBP17.45■□□□□ 0.38
SMARCA2-203ENST00000349721 NAA15Q9BXJ9 866 aaKnown RBP17.45■□□□□ 0.38
SMARCA2-203ENST00000349721 PPP4R3BQ5MIZ7 849 aa17.45■□□□□ 0.38
SMARCA2-203ENST00000349721 FEZ1Q99689 392 aa17.45■□□□□ 0.38
SMARCA2-203ENST00000349721 PPP1R12BO60237 982 aaPredicted RBP17.45■□□□□ 0.38
SMARCA2-203ENST00000349721 FKBP15Q5T1M5 1219 aa17.45■□□□□ 0.38
SMARCA2-203ENST00000349721 VPS36Q86VN1 386 aa17.44■□□□□ 0.38
SMARCA2-203ENST00000349721 CTNNA3Q9UI47 895 aa17.44■□□□□ 0.38
SMARCA2-203ENST00000349721 CTR9Q6PD62 1173 aa17.44■□□□□ 0.38
SMARCA2-203ENST00000349721 ADAMTS8Q9UP79 889 aa17.44■□□□□ 0.38
SMARCA2-203ENST00000349721 USO1O60763 962 aaKnown RBP17.44■□□□□ 0.38
SMARCA2-203ENST00000349721 TOP1P11387 765 aaKnown RBP17.44■□□□□ 0.38
SMARCA2-203ENST00000349721 MNAT1P51948 309 aa17.44■□□□□ 0.38
SMARCA2-203ENST00000349721 CFAP57Q96MR6 1250 aa17.44■□□□□ 0.38
SMARCA2-203ENST00000349721 TAOK3Q9H2K8 898 aa17.44■□□□□ 0.38
SMARCA2-203ENST00000349721 GOLGA6L9A6NEM1 432 aa17.44■□□□□ 0.38
SMARCA2-203ENST00000349721 CLIP2Q9UDT6 1046 aa17.44■□□□□ 0.38
SMARCA2-203ENST00000349721 SSR1P43307 286 aaKnown RBP17.43■□□□□ 0.38
SMARCA2-203ENST00000349721 GSDMDP57764 484 aa17.43■□□□□ 0.38
SMARCA2-203ENST00000349721 GAS2L2Q8NHY3 880 aa17.43■□□□□ 0.38
SMARCA2-203ENST00000349721 CHD1LQ86WJ1 897 aa17.43■□□□□ 0.38
SMARCA2-203ENST00000349721 TRERF1Q96PN7 1200 aa17.43■□□□□ 0.38
SMARCA2-203ENST00000349721 GSTTP1A0A1W2PQM5 241 aa17.43■□□□□ 0.38
SMARCA2-203ENST00000349721 CCDC178Q5BJE1 867 aa17.43■□□□□ 0.38
SMARCA2-203ENST00000349721 GOPCQ9HD26 462 aa17.43■□□□□ 0.38
SMARCA2-203ENST00000349721 ANAPC15P60006 121 aa17.42■□□□□ 0.38
SMARCA2-203ENST00000349721 NOB1Q9ULX3 412 aaKnown RBP17.42■□□□□ 0.38
SMARCA2-203ENST00000349721 TWISTNBQ3B726 338 aaPredicted RBP17.42■□□□□ 0.38
SMARCA2-203ENST00000349721 TCP11L2Q8N4U5 519 aa17.42■□□□□ 0.38
SMARCA2-203ENST00000349721 PRIMPOLQ96LW4 560 aa17.42■□□□□ 0.38
SMARCA2-203ENST00000349721 BCCIPQ9P287 314 aaKnown RBP eCLIP17.42■□□□□ 0.38
SMARCA2-203ENST00000349721 CTAGE5O15320 804 aa17.42■□□□□ 0.38
SMARCA2-203ENST00000349721 IVLP07476 585 aa17.42■□□□□ 0.38
SMARCA2-203ENST00000349721 EXOSC9Q06265 439 aaKnown RBP17.42■□□□□ 0.38
SMARCA2-203ENST00000349721 XPCQ01831 940 aaPredicted RBP17.42■□□□□ 0.38
SMARCA2-203ENST00000349721 UBE4AQ14139 1066 aa17.42■□□□□ 0.38
SMARCA2-203ENST00000349721 PLEKHH1Q9ULM0 1364 aa17.41■□□□□ 0.38
SMARCA2-203ENST00000349721 TRIM21P19474 475 aaKnown RBP17.41■□□□□ 0.38
SMARCA2-203ENST00000349721 JAKMIP1Q96N16 626 aaKnown RBP17.41■□□□□ 0.38
SMARCA2-203ENST00000349721 ATF3P18847 181 aa17.41■□□□□ 0.38
SMARCA2-203ENST00000349721 RAI14Q9P0K7 980 aa17.41■□□□□ 0.38
SMARCA2-203ENST00000349721 RRBP1Q9P2E9 1410 aaKnown RBP17.41■□□□□ 0.38
SMARCA2-203ENST00000349721 LMAN1P49257 510 aa17.41■□□□□ 0.38
SMARCA2-203ENST00000349721 NBPF1Q3BBV0 1214 aa17.41■□□□□ 0.38
SMARCA2-203ENST00000349721 SCAND2PQ9GZW5 306 aaPredicted RBP17.41■□□□□ 0.38
SMARCA2-203ENST00000349721 C1orf115Q9H7X2 142 aa17.41■□□□□ 0.38
SMARCA2-203ENST00000349721 HOOK3Q86VS8 718 aa17.4■□□□□ 0.38
SMARCA2-203ENST00000349721 NUP133Q8WUM0 1156 aa17.4■□□□□ 0.38
SMARCA2-203ENST00000349721 DNAI2Q9GZS0 605 aa17.4■□□□□ 0.38
SMARCA2-203ENST00000349721 ZHX1Q9UKY1 873 aaPredicted RBP17.4■□□□□ 0.38
SMARCA2-203ENST00000349721 SPECC1Q5M775 1068 aa17.4■□□□□ 0.38
SMARCA2-203ENST00000349721 KIF6Q6ZMV9 814 aa17.4■□□□□ 0.38
SMARCA2-203ENST00000349721 TSG101Q99816 390 aa17.4■□□□□ 0.38
SMARCA2-203ENST00000349721 CCDC97Q96F63 343 aaPredicted RBP17.4■□□□□ 0.38
SMARCA2-203ENST00000349721 PAXBP1Q9Y5B6 917 aa17.4■□□□□ 0.38
SMARCA2-203ENST00000349721 SSBP05455 408 aaKnown RBP eCLIP17.4■□□□□ 0.38
SMARCA2-203ENST00000349721 HSPA4P34932 840 aa17.4■□□□□ 0.38
SMARCA2-203ENST00000349721 FGFR1OPO95684 399 aaKnown RBP17.4■□□□□ 0.38
SMARCA2-203ENST00000349721 ALS2CR12Q96Q35 445 aa17.39■□□□□ 0.37
SMARCA2-203ENST00000349721 FHOD3Q2V2M9 1422 aa17.39■□□□□ 0.37
SMARCA2-203ENST00000349721 YEATS4O95619 227 aa17.39■□□□□ 0.37
SMARCA2-203ENST00000349721 CAMK4Q16566 473 aa17.39■□□□□ 0.37
SMARCA2-203ENST00000349721 DAAM2Q86T65 1068 aa17.39■□□□□ 0.37
SMARCA2-203ENST00000349721 CDCA7LQ96GN5 454 aa17.39■□□□□ 0.37
SMARCA2-203ENST00000349721 PHF23Q9BUL5 403 aaPredicted RBP17.39■□□□□ 0.37
SMARCA2-203ENST00000349721 CACNA2D4Q7Z3S7 1137 aa17.38■□□□□ 0.37
SMARCA2-203ENST00000349721 MVPQ14764 893 aaKnown RBP17.38■□□□□ 0.37
SMARCA2-203ENST00000349721 CNNM1Q9NRU3 951 aa17.38■□□□□ 0.37
SMARCA2-203ENST00000349721 SCAPERQ9BY12 1400 aa17.38■□□□□ 0.37
SMARCA2-203ENST00000349721 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
SMARCA2-203ENST00000349721 CEP112Q8N8E3 955 aa17.38■□□□□ 0.37
SMARCA2-203ENST00000349721 KRT222Q8N1A0 295 aa17.38■□□□□ 0.37
SMARCA2-203ENST00000349721 ZMYND15Q9H091 742 aa17.37■□□□□ 0.37
SMARCA2-203ENST00000349721 RAPGEF2Q9Y4G8 1499 aa17.37■□□□□ 0.37
SMARCA2-203ENST00000349721 UBAC1Q9BSL1 405 aa17.37■□□□□ 0.37
SMARCA2-203ENST00000349721 LARP1Q6PKG0 1096 aaKnown RBP17.37■□□□□ 0.37
SMARCA2-203ENST00000349721 SMG6Q86US8 1419 aaKnown RBP17.37■□□□□ 0.37
SMARCA2-203ENST00000349721 PHAXQ9H814 394 aaKnown RBP17.36■□□□□ 0.37
SMARCA2-203ENST00000349721 NLRP2Q9NX02 1062 aa17.36■□□□□ 0.37
SMARCA2-203ENST00000349721 RBM25P49756 843 aaKnown RBP17.36■□□□□ 0.37
SMARCA2-203ENST00000349721 BBXQ8WY36 941 aaPredicted RBP17.36■□□□□ 0.37
SMARCA2-203ENST00000349721 C16orf45Q96MC5 204 aaPredicted RBP17.36■□□□□ 0.37
SMARCA2-203ENST00000349721 FBF1Q8TES7 1133 aa17.35■□□□□ 0.37
SMARCA2-203ENST00000349721 DDX12PQ92771 950 aa17.35■□□□□ 0.37
SMARCA2-203ENST00000349721 SNW1Q13573 536 aaKnown RBP17.35■□□□□ 0.37
SMARCA2-203ENST00000349721 UVSSAQ2YD98 709 aa17.35■□□□□ 0.37
SMARCA2-203ENST00000349721 WDR63Q8IWG1 891 aa17.35■□□□□ 0.37
SMARCA2-203ENST00000349721 NSRP1Q9H0G5 558 aaKnown RBP17.35■□□□□ 0.37
SMARCA2-203ENST00000349721 FSD2A1L4K1 749 aa17.34■□□□□ 0.37
SMARCA2-203ENST00000349721 HSF2BPO75031 334 aa17.34■□□□□ 0.37
SMARCA2-203ENST00000349721 HLTFQ14527 1009 aaKnown RBP eCLIP17.34■□□□□ 0.37
SMARCA2-203ENST00000349721 NUP88Q99567 741 aaPredicted RBP17.34■□□□□ 0.37
SMARCA2-203ENST00000349721 MATR3P43243 847 aaKnown RBP eCLIP17.34■□□□□ 0.37
SMARCA2-203ENST00000349721 MAATS1Q7Z4T9 603 aa17.34■□□□□ 0.37
SMARCA2-203ENST00000349721 PPP2R1AP30153 589 aa17.34■□□□□ 0.37
SMARCA2-203ENST00000349721 MTHFSP49914 203 aa17.34■□□□□ 0.37
SMARCA2-203ENST00000349721 IRX3P78415 501 aaPredicted RBP17.34■□□□□ 0.37
SMARCA2-203ENST00000349721 ATF7IPQ6VMQ6 1270 aa17.34■□□□□ 0.37
SMARCA2-203ENST00000349721 GGNBP2Q9H3C7 697 aa17.34■□□□□ 0.37
SMARCA2-203ENST00000349721 ABCC8Q09428 1581 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms