RNA–Protein interactions for RNA: ENST00000349460.8

EPB41-203, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-203ENST00000349460 MAP3K5Q99683 1374 aa13.74□□□□□ -0.21
EPB41-203ENST00000349460 TRIM27P14373 513 aa13.74□□□□□ -0.21
EPB41-203ENST00000349460 AEBP1Q8IUX7 1158 aa13.74□□□□□ -0.21
EPB41-203ENST00000349460 API5Q9BZZ5 524 aaKnown RBP13.73□□□□□ -0.21
EPB41-203ENST00000349460 PTPRCP08575 1304 aa13.73□□□□□ -0.21
EPB41-203ENST00000349460 NPHP3Q7Z494 1330 aa13.73□□□□□ -0.21
EPB41-203ENST00000349460 RWDD1Q9H446 243 aaPredicted RBP13.73□□□□□ -0.21
EPB41-203ENST00000349460 NHSL1Q5SYE7 1610 aa13.73□□□□□ -0.21
EPB41-203ENST00000349460 RLBP1P12271 317 aa13.72□□□□□ -0.21
EPB41-203ENST00000349460 ATF3P18847 181 aa13.72□□□□□ -0.21
EPB41-203ENST00000349460 PANK1Q8TE04 598 aa13.72□□□□□ -0.21
EPB41-203ENST00000349460 TWISTNBQ3B726 338 aaPredicted RBP13.72□□□□□ -0.21
EPB41-203ENST00000349460 KRT28Q7Z3Y7 464 aa13.72□□□□□ -0.21
EPB41-203ENST00000349460 BACH2Q9BYV9 841 aa13.72□□□□□ -0.21
EPB41-203ENST00000349460 PARP4Q9UKK3 1724 aaKnown RBP13.71□□□□□ -0.21
EPB41-203ENST00000349460 PXDNLA1KZ92 1463 aa13.71□□□□□ -0.21
EPB41-203ENST00000349460 MTHFSDQ2M296 383 aaKnown RBP13.71□□□□□ -0.21
EPB41-203ENST00000349460 AMOTQ4VCS5 1084 aa13.71□□□□□ -0.21
EPB41-203ENST00000349460 FTSJ3Q8IY81 847 aaKnown RBP13.71□□□□□ -0.21
EPB41-203ENST00000349460 PKD1L3Q7Z443 1732 aa13.71□□□□□ -0.21
EPB41-203ENST00000349460 GNAT3A8MTJ3 354 aa13.71□□□□□ -0.22
EPB41-203ENST00000349460 HOXB7P09629 217 aa13.71□□□□□ -0.22
EPB41-203ENST00000349460 NOB1Q9ULX3 412 aaKnown RBP13.71□□□□□ -0.22
EPB41-203ENST00000349460 COG6Q9Y2V7 657 aa13.71□□□□□ -0.22
EPB41-203ENST00000349460 IBTKQ9P2D0 1353 aaPredicted RBP13.71□□□□□ -0.22
EPB41-203ENST00000349460 RGPD2P0DJD1 1756 aa13.7□□□□□ -0.22
EPB41-203ENST00000349460 GCP02774 474 aa13.7□□□□□ -0.22
EPB41-203ENST00000349460 ZBTB40Q9NUA8 1239 aa13.7□□□□□ -0.22
EPB41-203ENST00000349460 RTF1Q92541 710 aaKnown RBP13.7□□□□□ -0.22
EPB41-203ENST00000349460 FRAT1Q92837 279 aaPredicted RBP13.69□□□□□ -0.22
EPB41-203ENST00000349460 ABCA3Q99758 1704 aa13.69□□□□□ -0.22
EPB41-203ENST00000349460 KDM4FA0A1W2PPD8 638 aa13.69□□□□□ -0.22
EPB41-203ENST00000349460 C14orf37Q86TY3 774 aa13.69□□□□□ -0.22
EPB41-203ENST00000349460 ORAI2Q96SN7 254 aa13.69□□□□□ -0.22
EPB41-203ENST00000349460 RGS12O14924 1447 aa13.68□□□□□ -0.22
EPB41-203ENST00000349460 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.68□□□□□ -0.225e-7■■■■□ 22.4
EPB41-203ENST00000349460 PAK3O75914 559 aaPredicted RBP13.68□□□□□ -0.22
EPB41-203ENST00000349460 INTS3Q68E01 1043 aaKnown RBP13.68□□□□□ -0.22
EPB41-203ENST00000349460 PDE4AP27815 886 aa13.66□□□□□ -0.22
EPB41-203ENST00000349460 SMC5Q8IY18 1101 aa13.66□□□□□ -0.22
EPB41-203ENST00000349460 C8orf58Q8NAV2 365 aa13.66□□□□□ -0.22
EPB41-203ENST00000349460 SPATA31A3Q5VYP0 1347 aa13.66□□□□□ -0.22
EPB41-203ENST00000349460 MRC1P22897 1456 aa13.66□□□□□ -0.22
EPB41-203ENST00000349460 RGPD5Q99666 1765 aa13.66□□□□□ -0.22
EPB41-203ENST00000349460 SCN11AQ9UI33 1791 aa13.66□□□□□ -0.22
EPB41-203ENST00000349460 IGHDP01880 384 aa13.66□□□□□ -0.22
EPB41-203ENST00000349460 AKAP4Q5JQC9 854 aa13.66□□□□□ -0.22
EPB41-203ENST00000349460 PCDHB15Q9Y5E8 787 aa13.66□□□□□ -0.22
EPB41-203ENST00000349460 SOS2Q07890 1332 aaPredicted RBP13.65□□□□□ -0.22
EPB41-203ENST00000349460 ZBTB7BO15156 539 aaPredicted RBP13.65□□□□□ -0.22
EPB41-203ENST00000349460 FAM161AQ3B820 660 aa13.65□□□□□ -0.22
EPB41-203ENST00000349460 PLEKHO1Q53GL0 409 aaPredicted RBP13.65□□□□□ -0.22
EPB41-203ENST00000349460 TSPYL6Q8N831 410 aa13.65□□□□□ -0.22
EPB41-203ENST00000349460 FAM83GA6ND36 823 aa13.64□□□□□ -0.23
EPB41-203ENST00000349460 TAF7Q15545 349 aaPredicted RBP13.64□□□□□ -0.23
EPB41-203ENST00000349460 TMEM57Q8N5G2 664 aa13.64□□□□□ -0.23
EPB41-203ENST00000349460 FOXO3O43524 673 aa13.64□□□□□ -0.23
EPB41-203ENST00000349460 THUMPD2Q9BTF0 503 aaKnown RBP13.64□□□□□ -0.23
EPB41-203ENST00000349460 COL22A1Q8NFW1 1626 aaPredicted RBP13.63□□□□□ -0.23
EPB41-203ENST00000349460 HEG1Q9ULI3 1381 aa13.63□□□□□ -0.23
EPB41-203ENST00000349460 ERBB3P21860 1342 aa13.63□□□□□ -0.23
EPB41-203ENST00000349460 NBPF6Q5VWK0 638 aa13.63□□□□□ -0.23
EPB41-203ENST00000349460 GCC1Q96CN9 775 aa13.63□□□□□ -0.23
EPB41-203ENST00000349460 NBPF4Q96M43 638 aa13.63□□□□□ -0.23
EPB41-203ENST00000349460 BCL2L13Q9BXK5 485 aa13.63□□□□□ -0.23
EPB41-203ENST00000349460 MCM10Q7L590 875 aa13.62□□□□□ -0.23
EPB41-203ENST00000349460 LAS1LQ9Y4W2 734 aaKnown RBP13.61□□□□□ -0.23
EPB41-203ENST00000349460 ITPRIPQ8IWB1 547 aa13.61□□□□□ -0.23
EPB41-203ENST00000349460 IL17REQ8NFR9 667 aa13.61□□□□□ -0.23
EPB41-203ENST00000349460 TSPYL4Q9UJ04 414 aa13.61□□□□□ -0.23
EPB41-203ENST00000349460 AHDC1Q5TGY3 1603 aaPredicted RBP13.61□□□□□ -0.23
EPB41-203ENST00000349460 ANKRD24Q8TF21 1146 aa13.61□□□□□ -0.23
EPB41-203ENST00000349460 TNNQ9UQP3 1299 aa13.61□□□□□ -0.23
EPB41-203ENST00000349460 DCTN1Q14203 1278 aa13.6□□□□□ -0.23
EPB41-203ENST00000349460 CCDC30Q5VVM6 783 aa13.6□□□□□ -0.23
EPB41-203ENST00000349460 CCT4P50991 539 aaKnown RBP13.59□□□□□ -0.23
EPB41-203ENST00000349460 C8orf34Q49A92 452 aa13.59□□□□□ -0.23
EPB41-203ENST00000349460 ANP32AP39687 249 aaKnown RBP13.58□□□□□ -0.23
EPB41-203ENST00000349460 NUTM2GQ5VZR2 741 aa13.58□□□□□ -0.23
EPB41-203ENST00000349460 EIF5BO60841 1220 aaKnown RBP13.58□□□□□ -0.24
EPB41-203ENST00000349460 BRINP3Q76B58 766 aa13.58□□□□□ -0.24
EPB41-203ENST00000349460 RPAP2Q8IXW5 612 aaPredicted RBP13.58□□□□□ -0.24
EPB41-203ENST00000349460 NUCB1Q02818 461 aa13.57□□□□□ -0.24
EPB41-203ENST00000349460 ATP10DQ9P241 1426 aa13.57□□□□□ -0.24
EPB41-203ENST00000349460 SOX12O15370 315 aa13.57□□□□□ -0.24
EPB41-203ENST00000349460 RBM33Q96EV2 1170 aaKnown RBP13.57□□□□□ -0.24
EPB41-203ENST00000349460 PLCH1Q4KWH8 1693 aa13.56□□□□□ -0.24
EPB41-203ENST00000349460 PDZRN3Q9UPQ7 1066 aa13.56□□□□□ -0.24
EPB41-203ENST00000349460 IPO9Q96P70 1041 aaKnown RBP13.56□□□□□ -0.24
EPB41-203ENST00000349460 PAPPAQ13219 1627 aa13.56□□□□□ -0.24
EPB41-203ENST00000349460 DDRGK1Q96HY6 314 aa13.56□□□□□ -0.24
EPB41-203ENST00000349460 LAMB4A4D0S4 1761 aa13.55□□□□□ -0.24
EPB41-203ENST00000349460 RNMTO43148 476 aaKnown RBP13.55□□□□□ -0.24
EPB41-203ENST00000349460 STK31Q9BXU1 1019 aa13.55□□□□□ -0.24
EPB41-203ENST00000349460 SLAIN2Q9P270 581 aa13.55□□□□□ -0.24
EPB41-203ENST00000349460 HSP90AB1P08238 724 aaKnown RBP13.54□□□□□ -0.24
EPB41-203ENST00000349460 EIF4A1P60842 406 aaKnown RBP13.54□□□□□ -0.24
EPB41-203ENST00000349460 COL14A1Q05707 1796 aaKnown RBP13.54□□□□□ -0.24
EPB41-203ENST00000349460 HSPA2P54652 639 aa13.54□□□□□ -0.24
EPB41-203ENST00000349460 C1orf141Q5JVX7 400 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms