RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 PRDM11Q9NQV5 511 aa24.12■■□□□ 1.45
PTN-201ENST00000348225 TOM1O60784 492 aa24.11■■□□□ 1.45
PTN-201ENST00000348225 BCAR3O75815 825 aa24.11■■□□□ 1.45
PTN-201ENST00000348225 AMOTQ4VCS5 1084 aa24.1■■□□□ 1.45
PTN-201ENST00000348225 LRRC37A3O60309 1634 aa24.1■■□□□ 1.45
PTN-201ENST00000348225 CSB-PGBD3P0DP91 1061 aa24.1■■□□□ 1.45
PTN-201ENST00000348225 PLEKHO1Q53GL0 409 aaPredicted RBP24.1■■□□□ 1.45
PTN-201ENST00000348225 MBIPQ9NS73 344 aa24.1■■□□□ 1.45
PTN-201ENST00000348225 COL22A1Q8NFW1 1626 aaPredicted RBP24.09■■□□□ 1.45
PTN-201ENST00000348225 ZNF428Q96B54 188 aa24.09■■□□□ 1.45
PTN-201ENST00000348225 CRB1P82279 1406 aa24.09■■□□□ 1.45
PTN-201ENST00000348225 NLRP2Q9NX02 1062 aa24.08■■□□□ 1.45
PTN-201ENST00000348225 PHLPP1O60346 1717 aa24.08■■□□□ 1.45
PTN-201ENST00000348225 PLEKHG2Q9H7P9 1386 aa24.07■■□□□ 1.44
PTN-201ENST00000348225 CANXP27824 592 aaKnown RBP24.07■■□□□ 1.44
PTN-201ENST00000348225 CHL1O00533 1208 aa24.05■■□□□ 1.44
PTN-201ENST00000348225 RAPGEF4Q8WZA2 1011 aa24.05■■□□□ 1.44
PTN-201ENST00000348225 EXOC6Q8TAG9 804 aa24.04■■□□□ 1.44
PTN-201ENST00000348225 COL16A1Q07092 1604 aaPredicted RBP24.03■■□□□ 1.44
PTN-201ENST00000348225 ALDH1L2Q3SY69 923 aa24.03■■□□□ 1.44
PTN-201ENST00000348225 AKAP4Q5JQC9 854 aa24.03■■□□□ 1.44
PTN-201ENST00000348225 ZNF530Q6P9A1 599 aaPredicted RBP24.03■■□□□ 1.44
PTN-201ENST00000348225 PELP1Q8IZL8 1130 aaKnown RBP24.03■■□□□ 1.44
PTN-201ENST00000348225 COL5A2P05997 1499 aaPredicted RBP24.03■■□□□ 1.44
PTN-201ENST00000348225 PDE3AQ14432 1141 aa24.02■■□□□ 1.44
PTN-201ENST00000348225 SMC4Q9NTJ3 1288 aa24.02■■□□□ 1.44
PTN-201ENST00000348225 WDR17Q8IZU2 1322 aa24.02■■□□□ 1.44
PTN-201ENST00000348225 TATP17735 454 aaPredicted RBP24.02■■□□□ 1.44
PTN-201ENST00000348225 C1orf141Q5JVX7 400 aa24.02■■□□□ 1.44
PTN-201ENST00000348225 CRBNQ96SW2 442 aa24.02■■□□□ 1.44
PTN-201ENST00000348225 C20orf194Q5TEA3 1177 aa24.01■■□□□ 1.43
PTN-201ENST00000348225 FRAT1Q92837 279 aaPredicted RBP24.01■■□□□ 1.43
PTN-201ENST00000348225 BCL2L13Q9BXK5 485 aa24.01■■□□□ 1.43
PTN-201ENST00000348225 BABAM1Q9NWV8 329 aa24■■□□□ 1.43
PTN-201ENST00000348225 TWISTNBQ3B726 338 aaPredicted RBP23.99■■□□□ 1.43
PTN-201ENST00000348225 IL17REQ8NFR9 667 aa23.99■■□□□ 1.43
PTN-201ENST00000348225 SSH1Q8WYL5 1049 aa23.99■■□□□ 1.43
PTN-201ENST00000348225 TSPYL4Q9UJ04 414 aa23.99■■□□□ 1.43
PTN-201ENST00000348225 OVOS2A0A0G2JMS6 1433 aa23.99■■□□□ 1.43
PTN-201ENST00000348225 CEMIPQ8WUJ3 1361 aa23.99■■□□□ 1.43
PTN-201ENST00000348225 COL14A1Q05707 1796 aaKnown RBP23.99■■□□□ 1.43
PTN-201ENST00000348225 VAMP4O75379 141 aa23.99■■□□□ 1.43
PTN-201ENST00000348225 PIP4K2BP78356 416 aa23.99■■□□□ 1.43
PTN-201ENST00000348225 KIF16BQ96L93 1317 aa23.98■■□□□ 1.43
PTN-201ENST00000348225 UBAP1LF5GYI3 381 aa23.98■■□□□ 1.43
PTN-201ENST00000348225 CCDC136Q96JN2 1154 aa23.98■■□□□ 1.43
PTN-201ENST00000348225 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.98■■□□□ 1.43
PTN-201ENST00000348225 MS4A1P11836 297 aa23.97■■□□□ 1.43
PTN-201ENST00000348225 B4GALNT3Q6L9W6 998 aa23.97■■□□□ 1.43
PTN-201ENST00000348225 SPG7Q9UQ90 795 aa23.97■■□□□ 1.43
PTN-201ENST00000348225 MEGF6O75095 1541 aa23.97■■□□□ 1.43
PTN-201ENST00000348225 PARP4Q9UKK3 1724 aaKnown RBP23.96■■□□□ 1.43
PTN-201ENST00000348225 ZKSCAN2Q63HK3 967 aa23.96■■□□□ 1.43
PTN-201ENST00000348225 TOM1L2Q6ZVM7 507 aa23.96■■□□□ 1.43
PTN-201ENST00000348225 PKD1L3Q7Z443 1732 aa23.96■■□□□ 1.43
PTN-201ENST00000348225 TAF7Q15545 349 aaPredicted RBP23.95■■□□□ 1.43
PTN-201ENST00000348225 TSPYL6Q8N831 410 aa23.95■■□□□ 1.43
PTN-201ENST00000348225 C8orf58Q8NAV2 365 aa23.95■■□□□ 1.43
PTN-201ENST00000348225 VIRMAQ69YN4 1812 aaKnown RBP23.95■■□□□ 1.42
PTN-201ENST00000348225 BRPF1P55201 1214 aaPredicted RBP23.95■■□□□ 1.42
PTN-201ENST00000348225 EVA1CP58658 441 aa23.95■■□□□ 1.42
PTN-201ENST00000348225 IPO8O15397 1037 aaKnown RBP23.94■■□□□ 1.42
PTN-201ENST00000348225 ELL2O00472 640 aaPredicted RBP23.93■■□□□ 1.42
PTN-201ENST00000348225 CARD10Q9BWT7 1032 aa23.93■■□□□ 1.42
PTN-201ENST00000348225 ADAMTS7Q9UKP4 1686 aa23.93■■□□□ 1.42
PTN-201ENST00000348225 TEFQ10587 303 aa23.92■■□□□ 1.42
PTN-201ENST00000348225 STRN4Q9NRL3 753 aa23.92■■□□□ 1.42
PTN-201ENST00000348225 MIS18AQ9NYP9 233 aa23.92■■□□□ 1.42
PTN-201ENST00000348225 RNMTO43148 476 aaKnown RBP23.91■■□□□ 1.42
PTN-201ENST00000348225 MPRIPQ6WCQ1 1025 aa23.9■■□□□ 1.42
PTN-201ENST00000348225 FTSJ3Q8IY81 847 aaKnown RBP23.9■■□□□ 1.42
PTN-201ENST00000348225 LGR6Q9HBX8 967 aa23.9■■□□□ 1.42
PTN-201ENST00000348225 SOS1Q07889 1333 aaPredicted RBP23.9■■□□□ 1.42
PTN-201ENST00000348225 ATF7IPQ6VMQ6 1270 aa23.89■■□□□ 1.42
PTN-201ENST00000348225 MRPL50Q8N5N7 158 aaKnown RBP23.89■■□□□ 1.42
PTN-201ENST00000348225 PANK1Q8TE04 598 aa23.89■■□□□ 1.42
PTN-201ENST00000348225 BTG4Q9NY30 223 aa23.89■■□□□ 1.42
PTN-201ENST00000348225 NOB1Q9ULX3 412 aaKnown RBP23.89■■□□□ 1.42
PTN-201ENST00000348225 KDM3BQ7LBC6 1761 aa23.89■■□□□ 1.41
PTN-201ENST00000348225 DZIP1LQ8IYY4 767 aaKnown RBP23.88■■□□□ 1.41
PTN-201ENST00000348225 IFNL2Q8IZJ0 200 aa23.88■■□□□ 1.41
PTN-201ENST00000348225 PHKG2P15735 406 aa23.88■■□□□ 1.41
PTN-201ENST00000348225 LARP1Q6PKG0 1096 aaKnown RBP23.88■■□□□ 1.41
PTN-201ENST00000348225 SCN11AQ9UI33 1791 aa23.87■■□□□ 1.41
PTN-201ENST00000348225 AAMPQ13685 434 aa23.87■■□□□ 1.41
PTN-201ENST00000348225 KRT24Q2M2I5 525 aa23.87■■□□□ 1.41
PTN-201ENST00000348225 COG6Q9Y2V7 657 aa23.87■■□□□ 1.41
PTN-201ENST00000348225 HSP90AB1P08238 724 aaKnown RBP23.86■■□□□ 1.41
PTN-201ENST00000348225 TRIM27P14373 513 aa23.86■■□□□ 1.41
PTN-201ENST00000348225 CERKQ8TCT0 537 aa23.86■■□□□ 1.41
PTN-201ENST00000348225 ARHGAP45Q92619 1136 aa23.86■■□□□ 1.41
PTN-201ENST00000348225 SIPA1L3O60292 1781 aaPredicted RBP23.86■■□□□ 1.41
PTN-201ENST00000348225 IL2RBP14784 551 aa23.85■■□□□ 1.41
PTN-201ENST00000348225 PLCH1Q4KWH8 1693 aa23.85■■□□□ 1.41
PTN-201ENST00000348225 CLUAP1Q96AJ1 413 aa23.84■■□□□ 1.41
PTN-201ENST00000348225 BTBD11A6QL63 1104 aa23.84■■□□□ 1.41
PTN-201ENST00000348225 RLBP1P12271 317 aa23.84■■□□□ 1.41
PTN-201ENST00000348225 PCDH11XQ9BZA7 1347 aa23.84■■□□□ 1.41
PTN-201ENST00000348225 PCDH11YQ9BZA8 1340 aa23.84■■□□□ 1.41
PTN-201ENST00000348225 TNNQ9UQP3 1299 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms