RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 C20orf194Q5TEA3 1177 aa22.12■■□□□ 1.13
UBE3C-201ENST00000348165 RAI14Q9P0K7 980 aa22.12■■□□□ 1.13
UBE3C-201ENST00000348165 BICRAQ9NZM4 1560 aa22.11■■□□□ 1.13
UBE3C-201ENST00000348165 K7ELQ4 463 aaPredicted RBP22.11■■□□□ 1.13
UBE3C-201ENST00000348165 ANKRD1Q15327 319 aa22.11■■□□□ 1.13
UBE3C-201ENST00000348165 ZSCAN25Q6NSZ9 544 aa22.11■■□□□ 1.13
UBE3C-201ENST00000348165 TRIM22Q8IYM9 498 aa22.11■■□□□ 1.13
UBE3C-201ENST00000348165 TMOD3Q9NYL9 352 aa22.11■■□□□ 1.13
UBE3C-201ENST00000348165 RBM5P52756 815 aaKnown RBP eCLIP22.11■■□□□ 1.13
UBE3C-201ENST00000348165 JAKMIP1Q96N16 626 aaKnown RBP22.11■■□□□ 1.13
UBE3C-201ENST00000348165 EPS15P42566 896 aa22.1■■□□□ 1.13
UBE3C-201ENST00000348165 LRP2BPQ9P2M1 347 aa22.1■■□□□ 1.13
UBE3C-201ENST00000348165 LARP1BQ659C4 914 aaKnown RBP22.1■■□□□ 1.13
UBE3C-201ENST00000348165 SMARCA5O60264 1052 aaPredicted RBP22.1■■□□□ 1.13
UBE3C-201ENST00000348165 TDO2P48775 406 aa22.1■■□□□ 1.13
UBE3C-201ENST00000348165 CDK5RAP3Q96JB5 506 aa22.1■■□□□ 1.13
UBE3C-201ENST00000348165 ABCF2Q9UG63 623 aa22.1■■□□□ 1.13
UBE3C-201ENST00000348165 CCDC69A6NI79 296 aa22.09■■□□□ 1.13
UBE3C-201ENST00000348165 GPS2Q13227 327 aa22.09■■□□□ 1.13
UBE3C-201ENST00000348165 R3HCC1Q9Y3T6 440 aaKnown RBP22.09■■□□□ 1.13
UBE3C-201ENST00000348165 NOS1P29475 1434 aa22.09■■□□□ 1.13
UBE3C-201ENST00000348165 IGHMBP2P38935 993 aaKnown RBP22.09■■□□□ 1.13
UBE3C-201ENST00000348165 KIF14Q15058 1648 aa22.09■■□□□ 1.13
UBE3C-201ENST00000348165 LARP1Q6PKG0 1096 aaKnown RBP22.09■■□□□ 1.13
UBE3C-201ENST00000348165 AMOTQ4VCS5 1084 aa22.08■■□□□ 1.13
UBE3C-201ENST00000348165 TXLNAP40222 546 aa22.08■■□□□ 1.13
UBE3C-201ENST00000348165 CT47A1Q5JQC4 288 aaPredicted RBP22.08■■□□□ 1.13
UBE3C-201ENST00000348165 MYD88Q99836 296 aa22.08■■□□□ 1.13
UBE3C-201ENST00000348165 URB2Q14146 1524 aaKnown RBP22.08■■□□□ 1.12
UBE3C-201ENST00000348165 METTL24Q5JXM2 366 aa22.08■■□□□ 1.12
UBE3C-201ENST00000348165 ME1P48163 572 aa22.07■■□□□ 1.12
UBE3C-201ENST00000348165 PDRG1Q9NUG6 133 aa22.07■■□□□ 1.12
UBE3C-201ENST00000348165 KIF1BPQ96EK5 621 aa22.07■■□□□ 1.12
UBE3C-201ENST00000348165 C14orf93Q9H972 538 aaKnown RBP22.07■■□□□ 1.12
UBE3C-201ENST00000348165 SMC2O95347 1197 aa22.06■■□□□ 1.12
UBE3C-201ENST00000348165 SKAP1Q86WV1 359 aa22.06■■□□□ 1.12
UBE3C-201ENST00000348165 BRPF1P55201 1214 aaPredicted RBP22.06■■□□□ 1.12
UBE3C-201ENST00000348165 JMYQ8N9B5 988 aa22.06■■□□□ 1.12
UBE3C-201ENST00000348165 WDR33Q9C0J8 1336 aaKnown RBP22.06■■□□□ 1.12
UBE3C-201ENST00000348165 CUL7Q14999 1698 aa22.06■■□□□ 1.12
UBE3C-201ENST00000348165 ZSCAN29Q8IWY8 852 aaPredicted RBP22.06■■□□□ 1.12
UBE3C-201ENST00000348165 CTNNA3Q9UI47 895 aa22.06■■□□□ 1.12
UBE3C-201ENST00000348165 FANCAO15360 1455 aa22.06■■□□□ 1.12
UBE3C-201ENST00000348165 TTLL5Q6EMB2 1281 aa22.05■■□□□ 1.12
UBE3C-201ENST00000348165 MNS1Q8NEH6 495 aa22.05■■□□□ 1.12
UBE3C-201ENST00000348165 FBLN1P23142 703 aa22.05■■□□□ 1.12
UBE3C-201ENST00000348165 LETM1O95202 739 aaPredicted RBP22.05■■□□□ 1.12
UBE3C-201ENST00000348165 TSPY26PQ9H489 355 aa22.05■■□□□ 1.12
UBE3C-201ENST00000348165 DENND4BO75064 1496 aaPredicted RBP22.05■■□□□ 1.12
UBE3C-201ENST00000348165 AEBP1Q8IUX7 1158 aa22.04■■□□□ 1.12
UBE3C-201ENST00000348165 KRT18P05783 430 aaKnown RBP22.04■■□□□ 1.12
UBE3C-201ENST00000348165 ALDH1L2Q3SY69 923 aa22.04■■□□□ 1.12
UBE3C-201ENST00000348165 CCAR1Q8IX12 1150 aaKnown RBP22.04■■□□□ 1.12
UBE3C-201ENST00000348165 UBAC1Q9BSL1 405 aa22.04■■□□□ 1.12
UBE3C-201ENST00000348165 BOLA2Q9H3K6 86 aa22.04■■□□□ 1.12
UBE3C-201ENST00000348165 MX1P20591 662 aa22.04■■□□□ 1.12
UBE3C-201ENST00000348165 CNKSR2Q8WXI2 1034 aa22.04■■□□□ 1.12
UBE3C-201ENST00000348165 KRT85P78386 507 aa22.03■■□□□ 1.12
UBE3C-201ENST00000348165 KRT28Q7Z3Y7 464 aa22.03■■□□□ 1.12
UBE3C-201ENST00000348165 ABCC11Q96J66 1382 aa22.03■■□□□ 1.12
UBE3C-201ENST00000348165 AIDAQ96BJ3 306 aa22.02■■□□□ 1.12
UBE3C-201ENST00000348165 DHX29Q7Z478 1369 aaKnown RBP22.02■■□□□ 1.12
UBE3C-201ENST00000348165 GLRX3O76003 335 aaKnown RBP22.02■■□□□ 1.12
UBE3C-201ENST00000348165 TEX35Q5T0J7 233 aa22.02■■□□□ 1.12
UBE3C-201ENST00000348165 UPF3BQ9BZI7 483 aaKnown RBP22.02■■□□□ 1.11
UBE3C-201ENST00000348165 CCDC39Q9UFE4 941 aa22.02■■□□□ 1.11
UBE3C-201ENST00000348165 DNAAF4Q8WXU2 420 aa22.01■■□□□ 1.11
UBE3C-201ENST00000348165 PIBF1Q8WXW3 757 aa22.01■■□□□ 1.11
UBE3C-201ENST00000348165 ZFYVE27Q5T4F4 411 aa22.01■■□□□ 1.11
UBE3C-201ENST00000348165 SOGA3Q5TF21 947 aa22.01■■□□□ 1.11
UBE3C-201ENST00000348165 KRT32Q14532 448 aa22■■□□□ 1.11
UBE3C-201ENST00000348165 ODF2Q5BJF6 829 aa22■■□□□ 1.11
UBE3C-201ENST00000348165 LRRFIP2Q9Y608 721 aaKnown RBP22■■□□□ 1.11
UBE3C-201ENST00000348165 FAM83GA6ND36 823 aa22■■□□□ 1.11
UBE3C-201ENST00000348165 CASTP20810 708 aaKnown RBP22■■□□□ 1.11
UBE3C-201ENST00000348165 ACEP12821 1306 aa22■■□□□ 1.11
UBE3C-201ENST00000348165 DDX11Q96FC9 970 aa22■■□□□ 1.11
UBE3C-201ENST00000348165 CCDC8Q9H0W5 538 aaPredicted RBP22■■□□□ 1.11
UBE3C-201ENST00000348165 FILIP1LQ4L180 1135 aa21.99■■□□□ 1.11
UBE3C-201ENST00000348165 ZHX3Q9H4I2 956 aa21.99■■□□□ 1.11
UBE3C-201ENST00000348165 DBF4Q9UBU7 674 aaPredicted RBP21.99■■□□□ 1.11
UBE3C-201ENST00000348165 MPNDQ8N594 471 aa21.99■■□□□ 1.11
UBE3C-201ENST00000348165 ZNF652Q9Y2D9 606 aa21.99■■□□□ 1.11
UBE3C-201ENST00000348165 SCAF11Q99590 1463 aaKnown RBP21.99■■□□□ 1.11
UBE3C-201ENST00000348165 ZPR1O75312 459 aa21.99■■□□□ 1.11
UBE3C-201ENST00000348165 TMEM132AQ24JP5 1023 aa21.98■■□□□ 1.11
UBE3C-201ENST00000348165 TNMDQ9H2S6 317 aa21.98■■□□□ 1.11
UBE3C-201ENST00000348165 NGLY1Q96IV0 654 aa21.98■■□□□ 1.11
UBE3C-201ENST00000348165 ZSCAN31Q96LW9 406 aaPredicted RBP21.98■■□□□ 1.11
UBE3C-201ENST00000348165 TRIM27P14373 513 aa21.98■■□□□ 1.11
UBE3C-201ENST00000348165 SPC24Q8NBT2 197 aa21.98■■□□□ 1.11
UBE3C-201ENST00000348165 ZBTB3Q9H5J0 574 aa21.98■■□□□ 1.11
UBE3C-201ENST00000348165 RRP9O43818 475 aaKnown RBP21.98■■□□□ 1.11
UBE3C-201ENST00000348165 FLIIQ13045 1269 aa21.98■■□□□ 1.11
UBE3C-201ENST00000348165 TRMT112Q9UI30 125 aaKnown RBP21.98■■□□□ 1.11
UBE3C-201ENST00000348165 DISP3Q9P2K9 1392 aa21.98■■□□□ 1.11
UBE3C-201ENST00000348165 RAB11FIP3O75154 756 aa21.97■■□□□ 1.11
UBE3C-201ENST00000348165 CHRNA2Q15822 529 aa21.97■■□□□ 1.11
UBE3C-201ENST00000348165 MAGEC2Q9UBF1 373 aaPredicted RBP21.97■■□□□ 1.11
UBE3C-201ENST00000348165 AKAP2Q9Y2D5 859 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms