RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 LY75O60449 1722 aa27.18■■□□□ 1.94
CLTA-202ENST00000345519 ITGB4P16144 1822 aa27.18■■□□□ 1.94
CLTA-202ENST00000345519 BCL11BQ9C0K0 894 aaPredicted RBP27.17■■□□□ 1.94
CLTA-202ENST00000345519 PLSCR1O15162 318 aa27.15■■□□□ 1.94
CLTA-202ENST00000345519 APBA3O96018 575 aa27.15■■□□□ 1.94
CLTA-202ENST00000345519 LRP5O75197 1615 aa27.15■■□□□ 1.94
CLTA-202ENST00000345519 PAPPAQ13219 1627 aa27.15■■□□□ 1.94
CLTA-202ENST00000345519 EZH2Q15910 746 aaKnown RBP27.13■■□□□ 1.93
CLTA-202ENST00000345519 MORC1Q86VD1 984 aa27.12■■□□□ 1.93
CLTA-202ENST00000345519 PTF1AQ7RTS3 328 aa27.11■■□□□ 1.93
CLTA-202ENST00000345519 USHBP1Q8N6Y0 703 aa27.11■■□□□ 1.93
CLTA-202ENST00000345519 IGSF1Q8N6C5 1336 aa27.11■■□□□ 1.93
CLTA-202ENST00000345519 TNNT2P45379 298 aaPredicted RBP27.1■■□□□ 1.93
CLTA-202ENST00000345519 EIF4A2Q14240 407 aaKnown RBP27.1■■□□□ 1.93
CLTA-202ENST00000345519 VIRMAQ69YN4 1812 aaKnown RBP27.09■■□□□ 1.93
CLTA-202ENST00000345519 PPM1GO15355 546 aaPredicted RBP27.09■■□□□ 1.93
CLTA-202ENST00000345519 ZCRB1Q8TBF4 217 aaKnown RBP27.09■■□□□ 1.93
CLTA-202ENST00000345519 EYA1Q99502 592 aa27.09■■□□□ 1.93
CLTA-202ENST00000345519 QSER1Q2KHR3 1735 aa27.09■■□□□ 1.93
CLTA-202ENST00000345519 RAPGEF4Q8WZA2 1011 aa27.08■■□□□ 1.93
CLTA-202ENST00000345519 CASZ1Q86V15 1759 aa27.07■■□□□ 1.92
CLTA-202ENST00000345519 COL3A1P02461 1466 aaPredicted RBP27.06■■□□□ 1.92
CLTA-202ENST00000345519 KCNQ2O43526 872 aa27.05■■□□□ 1.92
CLTA-202ENST00000345519 TATP17735 454 aaPredicted RBP27.05■■□□□ 1.92
CLTA-202ENST00000345519 PCDH11XQ9BZA7 1347 aa27.05■■□□□ 1.92
CLTA-202ENST00000345519 PCDH11YQ9BZA8 1340 aa27.05■■□□□ 1.92
CLTA-202ENST00000345519 KDRP35968 1356 aa27.05■■□□□ 1.92
CLTA-202ENST00000345519 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.03■■□□□ 1.921e-8■■■■□ 20.2
CLTA-202ENST00000345519 TAF1LQ8IZX4 1826 aa27.02■■□□□ 1.92
CLTA-202ENST00000345519 DDX54Q8TDD1 881 aaKnown RBP27.01■■□□□ 1.91
CLTA-202ENST00000345519 TUBGCP6Q96RT7 1819 aa27■■□□□ 1.91
CLTA-202ENST00000345519 PROM2Q8N271 834 aa27■■□□□ 1.91
CLTA-202ENST00000345519 SCN11AQ9UI33 1791 aa26.99■■□□□ 1.91
CLTA-202ENST00000345519 CYP27B1O15528 508 aa26.98■■□□□ 1.91
CLTA-202ENST00000345519 ACSBG1Q96GR2 724 aa26.98■■□□□ 1.91
CLTA-202ENST00000345519 IL13P35225 146 aa26.97■■□□□ 1.91
CLTA-202ENST00000345519 NKX1-1Q15270 411 aaPredicted RBP26.97■■□□□ 1.91
CLTA-202ENST00000345519 CC2D1BQ5T0F9 858 aaKnown RBP26.97■■□□□ 1.91
CLTA-202ENST00000345519 C5P01031 1676 aa26.96■■□□□ 1.91
CLTA-202ENST00000345519 ADAMTS7Q9UKP4 1686 aa26.96■■□□□ 1.91
CLTA-202ENST00000345519 ZNF831Q5JPB2 1677 aa26.95■■□□□ 1.91
CLTA-202ENST00000345519 MTHFSP49914 203 aa26.95■■□□□ 1.9
CLTA-202ENST00000345519 TXNRD1Q16881 649 aa26.93■■□□□ 1.9
CLTA-202ENST00000345519 SPG7Q9UQ90 795 aa26.93■■□□□ 1.9
CLTA-202ENST00000345519 COL24A1Q17RW2 1714 aa26.93■■□□□ 1.9
CLTA-202ENST00000345519 PRIM1P49642 420 aaKnown RBP26.9■■□□□ 1.9
CLTA-202ENST00000345519 R3HDM1Q15032 1099 aaKnown RBP26.9■■□□□ 1.9
CLTA-202ENST00000345519 PSDA5PKW4 1024 aaPredicted RBP26.89■■□□□ 1.9
CLTA-202ENST00000345519 ANO8Q9HCE9 1232 aaPredicted RBP26.89■■□□□ 1.9
CLTA-202ENST00000345519 CICQ96RK0 1608 aaPredicted RBP26.88■■□□□ 1.89
CLTA-202ENST00000345519 NBPF14Q5TI25 921 aa26.88■■□□□ 1.89
CLTA-202ENST00000345519 PHKG2P15735 406 aa26.87■■□□□ 1.89
CLTA-202ENST00000345519 AEBP1Q8IUX7 1158 aa26.87■■□□□ 1.89
CLTA-202ENST00000345519 SLC27A3Q5K4L6 730 aa26.85■■□□□ 1.89
CLTA-202ENST00000345519 IFNL2Q8IZJ0 200 aa26.85■■□□□ 1.89
CLTA-202ENST00000345519 KDM6AO15550 1401 aaPredicted RBP26.84■■□□□ 1.89
CLTA-202ENST00000345519 COL5A3P25940 1745 aaPredicted RBP26.83■■□□□ 1.89
CLTA-202ENST00000345519 AMOTQ4VCS5 1084 aa26.83■■□□□ 1.89
CLTA-202ENST00000345519 SULT6B1Q6IMI4 303 aa26.83■■□□□ 1.89
CLTA-202ENST00000345519 LRRC4BQ9NT99 713 aa26.83■■□□□ 1.89
CLTA-202ENST00000345519 MRC1P22897 1456 aa26.82■■□□□ 1.88
CLTA-202ENST00000345519 SIPA1L3O60292 1781 aaPredicted RBP26.82■■□□□ 1.88
CLTA-202ENST00000345519 DIAPH1O60610 1272 aaKnown RBP26.82■■□□□ 1.88
CLTA-202ENST00000345519 SYTL4Q96C24 671 aaPredicted RBP26.82■■□□□ 1.88
CLTA-202ENST00000345519 UBR3Q6ZT12 1888 aa26.82■■□□□ 1.88
CLTA-202ENST00000345519 C4BP0C0L5 1744 aa26.81■■□□□ 1.88
CLTA-202ENST00000345519 ZEB1P37275 1124 aaPredicted RBP26.8■■□□□ 1.88
CLTA-202ENST00000345519 PLEKHO1Q53GL0 409 aaPredicted RBP26.8■■□□□ 1.88
CLTA-202ENST00000345519 PPP2R1AP30153 589 aa26.79■■□□□ 1.88
CLTA-202ENST00000345519 SLC15A2Q16348 729 aa26.79■■□□□ 1.88
CLTA-202ENST00000345519 PALLDQ8WX93 1383 aa26.77■■□□□ 1.88
CLTA-202ENST00000345519 HSP90AB1P08238 724 aaKnown RBP26.76■■□□□ 1.87
CLTA-202ENST00000345519 DCAF5Q96JK2 942 aa26.76■■□□□ 1.87
CLTA-202ENST00000345519 UBR2Q8IWV8 1755 aa26.76■■□□□ 1.87
CLTA-202ENST00000345519 PIGBQ92521 554 aa26.75■■□□□ 1.87
CLTA-202ENST00000345519 AKT1S1Q96B36 256 aa26.75■■□□□ 1.87
CLTA-202ENST00000345519 ERVV-2B6SEH9 535 aa26.74■■□□□ 1.87
CLTA-202ENST00000345519 ZNF530Q6P9A1 599 aaPredicted RBP26.74■■□□□ 1.87
CLTA-202ENST00000345519 MPRIPQ6WCQ1 1025 aa26.74■■□□□ 1.87
CLTA-202ENST00000345519 STK32BQ9NY57 414 aa26.74■■□□□ 1.87
CLTA-202ENST00000345519 ZNF827Q17R98 1081 aa26.73■■□□□ 1.87
CLTA-202ENST00000345519 TJP1Q07157 1748 aa26.72■■□□□ 1.87
CLTA-202ENST00000345519 DLG5Q8TDM6 1919 aa26.72■■□□□ 1.87
CLTA-202ENST00000345519 SMARCC1Q92922 1105 aaPredicted RBP26.71■■□□□ 1.87
CLTA-202ENST00000345519 HMOX1P09601 288 aa26.7■■□□□ 1.86
CLTA-202ENST00000345519 CFAP53Q96M91 514 aa26.7■■□□□ 1.86
CLTA-202ENST00000345519 TMOD3Q9NYL9 352 aa26.7■■□□□ 1.86
CLTA-202ENST00000345519 CCNL1Q9UK58 526 aaPredicted RBP26.7■■□□□ 1.86
CLTA-202ENST00000345519 AKAP4Q5JQC9 854 aa26.69■■□□□ 1.86
CLTA-202ENST00000345519 CNGB1Q14028 1251 aaPredicted RBP26.68■■□□□ 1.86
CLTA-202ENST00000345519 PDGFDQ9GZP0 370 aaPredicted RBP26.68■■□□□ 1.86
CLTA-202ENST00000345519 HMGB2P26583 209 aaKnown RBP26.67■■□□□ 1.86
CLTA-202ENST00000345519 C1orf141Q5JVX7 400 aa26.67■■□□□ 1.86
CLTA-202ENST00000345519 MYH14Q7Z406 1995 aaKnown RBP26.66■■□□□ 1.86
CLTA-202ENST00000345519 RSPH6AQ9H0K4 717 aa26.65■■□□□ 1.86
CLTA-202ENST00000345519 KCNQ4P56696 695 aa26.64■■□□□ 1.86
CLTA-202ENST00000345519 MTHFSDQ2M296 383 aaKnown RBP26.64■■□□□ 1.86
CLTA-202ENST00000345519 ATG3Q9NT62 314 aa26.64■■□□□ 1.86
CLTA-202ENST00000345519 PNPLA7Q6ZV29 1317 aa26.64■■□□□ 1.85
CLTA-202ENST00000345519 SPON1Q9HCB6 807 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms