RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 SH2B1Q9NRF2 756 aaPredicted RBP21.27■■□□□ 1
SMC4-201ENST00000344722 GIMAP7Q8NHV1 300 aa21.27■□□□□ 0.99
SMC4-201ENST00000344722 FCHSD2O94868 740 aa21.26■□□□□ 0.99
SMC4-201ENST00000344722 TXLNBQ8N3L3 684 aa21.26■□□□□ 0.99
SMC4-201ENST00000344722 DNAJC2Q99543 621 aaKnown RBP21.26■□□□□ 0.99
SMC4-201ENST00000344722 MAP4K4O95819 1239 aaPredicted RBP21.26■□□□□ 0.99
SMC4-201ENST00000344722 GSDMDP57764 484 aa21.26■□□□□ 0.99
SMC4-201ENST00000344722 CCDC181Q5TID7 509 aa21.26■□□□□ 0.99
SMC4-201ENST00000344722 CTAGE5O15320 804 aa21.25■□□□□ 0.99
SMC4-201ENST00000344722 SHTN1A0MZ66 631 aa21.25■□□□□ 0.99
SMC4-201ENST00000344722 CASQ1P31415 396 aa21.25■□□□□ 0.99
SMC4-201ENST00000344722 DDX19AQ9NUU7 478 aaKnown RBP21.25■□□□□ 0.99
SMC4-201ENST00000344722 POLR3GO15318 223 aaPredicted RBP21.25■□□□□ 0.99
SMC4-201ENST00000344722 URI1O94763 535 aaPredicted RBP21.25■□□□□ 0.99
SMC4-201ENST00000344722 SART3Q15020 963 aaKnown RBP21.25■□□□□ 0.99
SMC4-201ENST00000344722 RPRD2Q5VT52 1461 aaKnown RBP21.25■□□□□ 0.99
SMC4-201ENST00000344722 CWC27Q6UX04 472 aaKnown RBP21.25■□□□□ 0.99
SMC4-201ENST00000344722 CCDC83Q8IWF9 413 aa21.24■□□□□ 0.99
SMC4-201ENST00000344722 CFAP100Q494V2 611 aa21.24■□□□□ 0.99
SMC4-201ENST00000344722 ERLIN2O94905 339 aa21.24■□□□□ 0.99
SMC4-201ENST00000344722 MX1P20591 662 aa21.24■□□□□ 0.99
SMC4-201ENST00000344722 CEP135Q66GS9 1140 aa21.24■□□□□ 0.99
SMC4-201ENST00000344722 TXLNAP40222 546 aa21.23■□□□□ 0.99
SMC4-201ENST00000344722 EPS15P42566 896 aa21.23■□□□□ 0.99
SMC4-201ENST00000344722 FAM193AP78312 1265 aa21.23■□□□□ 0.99
SMC4-201ENST00000344722 BBXQ8WY36 941 aaPredicted RBP21.23■□□□□ 0.99
SMC4-201ENST00000344722 CRACR2AQ9BSW2 395 aa21.23■□□□□ 0.99
SMC4-201ENST00000344722 ARHGAP29Q52LW3 1261 aa21.23■□□□□ 0.99
SMC4-201ENST00000344722 MCM3P25205 808 aa21.23■□□□□ 0.99
SMC4-201ENST00000344722 UBE2HP62256 183 aa21.23■□□□□ 0.99
SMC4-201ENST00000344722 MAP9Q49MG5 647 aa21.23■□□□□ 0.99
SMC4-201ENST00000344722 TRERF1Q96PN7 1200 aa21.23■□□□□ 0.99
SMC4-201ENST00000344722 AQRO60306 1485 aaKnown RBP eCLIP21.22■□□□□ 0.994e-8■■■■■ 71.8
SMC4-201ENST00000344722 CCDC148Q8NFR7 591 aa21.22■□□□□ 0.99
SMC4-201ENST00000344722 PCF11O94913 1555 aaKnown RBP21.22■□□□□ 0.99
SMC4-201ENST00000344722 HDAC1Q13547 482 aaPredicted RBP21.22■□□□□ 0.99
SMC4-201ENST00000344722 LUC7LQ9NQ29 371 aaKnown RBP21.22■□□□□ 0.99
SMC4-201ENST00000344722 EPB41L2O43491 1005 aaKnown RBP21.22■□□□□ 0.99
SMC4-201ENST00000344722 CAVIN2O95810 425 aa21.22■□□□□ 0.99
SMC4-201ENST00000344722 CCDC171Q6TFL3 1326 aa21.22■□□□□ 0.99
SMC4-201ENST00000344722 POTEB2H3BUK9 544 aa21.22■□□□□ 0.99
SMC4-201ENST00000344722 PTPN23Q9H3S7 1636 aa21.22■□□□□ 0.99
SMC4-201ENST00000344722 NSD3Q9BZ95 1437 aa21.22■□□□□ 0.99
SMC4-201ENST00000344722 TRIM27P14373 513 aa21.21■□□□□ 0.99
SMC4-201ENST00000344722 RAB3GAP1Q15042 981 aa21.21■□□□□ 0.99
SMC4-201ENST00000344722 LIMCH1Q9UPQ0 1083 aa21.21■□□□□ 0.99
SMC4-201ENST00000344722 AIMP1Q12904 312 aaKnown RBP21.21■□□□□ 0.99
SMC4-201ENST00000344722 JAKMIP3Q5VZ66 844 aa21.21■□□□□ 0.99
SMC4-201ENST00000344722 NFE2L2Q16236 605 aa21.2■□□□□ 0.98
SMC4-201ENST00000344722 FERMT3Q86UX7 667 aa21.2■□□□□ 0.98
SMC4-201ENST00000344722 RBM25P49756 843 aaKnown RBP21.2■□□□□ 0.98
SMC4-201ENST00000344722 ATP2B1P20020 1258 aa21.2■□□□□ 0.98
SMC4-201ENST00000344722 SMC5Q8IY18 1101 aa21.2■□□□□ 0.98
SMC4-201ENST00000344722 TRMT1Q9NXH9 659 aaKnown RBP21.19■□□□□ 0.98
SMC4-201ENST00000344722 ARHGAP5Q13017 1502 aa21.19■□□□□ 0.98
SMC4-201ENST00000344722 KIF5CO60282 957 aa21.19■□□□□ 0.98
SMC4-201ENST00000344722 SNW1Q13573 536 aaKnown RBP21.18■□□□□ 0.98
SMC4-201ENST00000344722 NCBP3Q53F19 620 aaKnown RBP21.18■□□□□ 0.98
SMC4-201ENST00000344722 TERF1P54274 439 aa21.18■□□□□ 0.98
SMC4-201ENST00000344722 TROQ12816 1431 aaPredicted RBP21.18■□□□□ 0.98
SMC4-201ENST00000344722 STIM1Q13586 685 aa21.18■□□□□ 0.98
SMC4-201ENST00000344722 DDX11Q96FC9 970 aa21.17■□□□□ 0.98
SMC4-201ENST00000344722 STX6O43752 255 aa21.17■□□□□ 0.98
SMC4-201ENST00000344722 KDM4AO75164 1064 aa21.17■□□□□ 0.98
SMC4-201ENST00000344722 HSP90AB2PQ58FF8 381 aa21.17■□□□□ 0.98
SMC4-201ENST00000344722 CKAP2LQ8IYA6 745 aa21.17■□□□□ 0.98
SMC4-201ENST00000344722 CENPHQ9H3R5 247 aa21.17■□□□□ 0.98
SMC4-201ENST00000344722 GDPD2Q9HCC8 539 aa21.17■□□□□ 0.98
SMC4-201ENST00000344722 NCAPD3P42695 1498 aa21.17■□□□□ 0.98
SMC4-201ENST00000344722 NUCB1Q02818 461 aa21.17■□□□□ 0.98
SMC4-201ENST00000344722 HDGFL1Q5TGJ6 251 aa21.17■□□□□ 0.98
SMC4-201ENST00000344722 CDKL5O76039 1030 aa21.17■□□□□ 0.98
SMC4-201ENST00000344722 HCLS1P14317 486 aaPredicted RBP21.17■□□□□ 0.98
SMC4-201ENST00000344722 GTF2E1P29083 439 aaPredicted RBP21.17■□□□□ 0.98
SMC4-201ENST00000344722 IL1RAPL2Q9NP60 686 aa21.17■□□□□ 0.98
SMC4-201ENST00000344722 SMARCA5O60264 1052 aaPredicted RBP21.16■□□□□ 0.98
SMC4-201ENST00000344722 RAB11FIP3O75154 756 aa21.16■□□□□ 0.98
SMC4-201ENST00000344722 ZRSR2Q15696 482 aaKnown RBP21.16■□□□□ 0.98
SMC4-201ENST00000344722 PLCD4Q9BRC7 762 aa21.16■□□□□ 0.98
SMC4-201ENST00000344722 TOP1P11387 765 aaKnown RBP21.16■□□□□ 0.98
SMC4-201ENST00000344722 CT47A1Q5JQC4 288 aaPredicted RBP21.16■□□□□ 0.98
SMC4-201ENST00000344722 SRGAP3O43295 1099 aa21.16■□□□□ 0.98
SMC4-201ENST00000344722 STX1AQ16623 288 aa21.16■□□□□ 0.98
SMC4-201ENST00000344722 EXOC6BQ9Y2D4 811 aa21.15■□□□□ 0.98
SMC4-201ENST00000344722 GOLGA6L9A6NEM1 432 aa21.15■□□□□ 0.98
SMC4-201ENST00000344722 AACSQ86V21 672 aa21.15■□□□□ 0.98
SMC4-201ENST00000344722 FEZ1Q99689 392 aa21.15■□□□□ 0.98
SMC4-201ENST00000344722 TBC1D2BQ9UPU7 963 aa21.15■□□□□ 0.98
SMC4-201ENST00000344722 TRIM22Q8IYM9 498 aa21.15■□□□□ 0.98
SMC4-201ENST00000344722 ZNF830Q96NB3 372 aaPredicted RBP21.15■□□□□ 0.98
SMC4-201ENST00000344722 ODF2Q5BJF6 829 aa21.15■□□□□ 0.98
SMC4-201ENST00000344722 TMX4Q9H1E5 349 aaPredicted RBP21.15■□□□□ 0.98
SMC4-201ENST00000344722 PRIM1P49642 420 aaKnown RBP21.14■□□□□ 0.98
SMC4-201ENST00000344722 NOL7Q9UMY1 257 aaKnown RBP21.14■□□□□ 0.97
SMC4-201ENST00000344722 TTC22Q5TAA0 569 aa21.14■□□□□ 0.97
SMC4-201ENST00000344722 SULT6B1Q6IMI4 303 aa21.14■□□□□ 0.97
SMC4-201ENST00000344722 PRPF40BQ6NWY9 871 aaKnown RBP21.14■□□□□ 0.97
SMC4-201ENST00000344722 CCDC150Q8NCX0 1101 aa21.14■□□□□ 0.97
SMC4-201ENST00000344722 ZNF165P49910 485 aa21.13■□□□□ 0.97
SMC4-201ENST00000344722 KIF4BQ2VIQ3 1234 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms