RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 TMX3Q96JJ7 454 aa9.28□□□□□ -0.92
KPNA1-201ENST00000344337 TOP2BQ02880 1626 aa9.28□□□□□ -0.92
KPNA1-201ENST00000344337 U2AF2P26368 475 aaKnown RBP eCLIP9.28□□□□□ -0.921e-6■■■□□ 15.3
KPNA1-201ENST00000344337 PSME1Q06323 249 aa9.28□□□□□ -0.92
KPNA1-201ENST00000344337 GPIHBP1Q8IV16 184 aa9.28□□□□□ -0.92
KPNA1-201ENST00000344337 SCAPERQ9BY12 1400 aa9.28□□□□□ -0.92
KPNA1-201ENST00000344337 POLR3DP05423 398 aaPredicted RBP9.27□□□□□ -0.92
KPNA1-201ENST00000344337 SUPT6HQ7KZ85 1726 aaKnown RBP9.27□□□□□ -0.92
KPNA1-201ENST00000344337 CENPHQ9H3R5 247 aa9.27□□□□□ -0.92
KPNA1-201ENST00000344337 NDUFB9Q9Y6M9 179 aa9.27□□□□□ -0.92
KPNA1-201ENST00000344337 DNM1Q05193 864 aaKnown RBP9.27□□□□□ -0.93
KPNA1-201ENST00000344337 NUP62CLQ9H1M0 184 aa9.27□□□□□ -0.93
KPNA1-201ENST00000344337 CYP46A1Q9Y6A2 500 aa9.27□□□□□ -0.93
KPNA1-201ENST00000344337 A0A087WWV3 80 aa9.27□□□□□ -0.93
KPNA1-201ENST00000344337 GADD45BO75293 160 aaPredicted RBP9.27□□□□□ -0.93
KPNA1-201ENST00000344337 BBXQ8WY36 941 aaPredicted RBP9.27□□□□□ -0.93
KPNA1-201ENST00000344337 GTF2E1P29083 439 aaPredicted RBP9.27□□□□□ -0.93
KPNA1-201ENST00000344337 HAND2P61296 217 aa9.27□□□□□ -0.93
KPNA1-201ENST00000344337 HSP90AB3PQ58FF7 597 aa9.27□□□□□ -0.93
KPNA1-201ENST00000344337 PLB1Q6P1J6 1458 aa9.27□□□□□ -0.93
KPNA1-201ENST00000344337 SETD1BQ9UPS6 1966 aaKnown RBP9.27□□□□□ -0.93
KPNA1-201ENST00000344337 MARCH6O60337 910 aa9.26□□□□□ -0.93
KPNA1-201ENST00000344337 STRN4Q9NRL3 753 aa9.26□□□□□ -0.93
KPNA1-201ENST00000344337 DHX29Q7Z478 1369 aaKnown RBP9.26□□□□□ -0.93
KPNA1-201ENST00000344337 FOXO3O43524 673 aa9.26□□□□□ -0.93
KPNA1-201ENST00000344337 URI1O94763 535 aaPredicted RBP9.26□□□□□ -0.93
KPNA1-201ENST00000344337 FKBP15Q5T1M5 1219 aa9.26□□□□□ -0.93
KPNA1-201ENST00000344337 PHACTR3Q96KR7 559 aa9.26□□□□□ -0.93
KPNA1-201ENST00000344337 NLRP2Q9NX02 1062 aa9.26□□□□□ -0.93
KPNA1-201ENST00000344337 ERICH3Q5RHP9 1530 aa9.26□□□□□ -0.93
KPNA1-201ENST00000344337 NEXNQ0ZGT2 675 aa9.26□□□□□ -0.93
KPNA1-201ENST00000344337 RABEP2Q9H5N1 569 aa9.26□□□□□ -0.93
KPNA1-201ENST00000344337 MBIPQ9NS73 344 aa9.26□□□□□ -0.93
KPNA1-201ENST00000344337 WDR33Q9C0J8 1336 aaKnown RBP9.26□□□□□ -0.93
KPNA1-201ENST00000344337 DHX16O60231 1041 aaKnown RBP9.26□□□□□ -0.93
KPNA1-201ENST00000344337 STK38Q15208 465 aa9.26□□□□□ -0.93
KPNA1-201ENST00000344337 PTPN21Q16825 1174 aa9.26□□□□□ -0.93
KPNA1-201ENST00000344337 GJB2P29033 226 aa9.25□□□□□ -0.93
KPNA1-201ENST00000344337 TAF7Q15545 349 aaPredicted RBP9.25□□□□□ -0.93
KPNA1-201ENST00000344337 FBXO31Q5XUX0 539 aaPredicted RBP9.25□□□□□ -0.93
KPNA1-201ENST00000344337 TEX35Q5T0J7 233 aa9.25□□□□□ -0.93
KPNA1-201ENST00000344337 SNRKQ9NRH2 765 aa9.25□□□□□ -0.93
KPNA1-201ENST00000344337 KRT85P78386 507 aa9.25□□□□□ -0.93
KPNA1-201ENST00000344337 TRIM29Q14134 588 aa9.25□□□□□ -0.93
KPNA1-201ENST00000344337 AXDND1Q5T1B0 1012 aaPredicted RBP9.25□□□□□ -0.93
KPNA1-201ENST00000344337 RNF20Q5VTR2 975 aa9.25□□□□□ -0.93
KPNA1-201ENST00000344337 CCDC186Q7Z3E2 898 aa9.25□□□□□ -0.93
KPNA1-201ENST00000344337 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.25□□□□□ -0.93
KPNA1-201ENST00000344337 PTGS1P23219 599 aa9.25□□□□□ -0.93
KPNA1-201ENST00000344337 AKAP17AQ02040 695 aaKnown RBP9.25□□□□□ -0.93
KPNA1-201ENST00000344337 ENOX2Q16206 610 aaKnown RBP9.25□□□□□ -0.93
KPNA1-201ENST00000344337 PLCD4Q9BRC7 762 aa9.25□□□□□ -0.93
KPNA1-201ENST00000344337 DHX8Q14562 1220 aaKnown RBP9.25□□□□□ -0.93
KPNA1-201ENST00000344337 LUZP1Q86V48 1076 aa9.25□□□□□ -0.93
KPNA1-201ENST00000344337 CLIP2Q9UDT6 1046 aa9.25□□□□□ -0.93
KPNA1-201ENST00000344337 PA2G4Q9UQ80 394 aaKnown RBP9.25□□□□□ -0.93
KPNA1-201ENST00000344337 RAB11FIP3O75154 756 aa9.24□□□□□ -0.93
KPNA1-201ENST00000344337 MX1P20591 662 aa9.24□□□□□ -0.93
KPNA1-201ENST00000344337 BLOC1S2Q6QNY1 142 aa9.24□□□□□ -0.93
KPNA1-201ENST00000344337 IPO4Q8TEX9 1081 aaKnown RBP9.24□□□□□ -0.93
KPNA1-201ENST00000344337 NUP133Q8WUM0 1156 aa9.24□□□□□ -0.93
KPNA1-201ENST00000344337 PER1O15534 1290 aaPredicted RBP9.24□□□□□ -0.93
KPNA1-201ENST00000344337 NOLC1Q14978 699 aaKnown RBP eCLIP9.24□□□□□ -0.93
KPNA1-201ENST00000344337 TAF3Q5VWG9 929 aa9.24□□□□□ -0.93
KPNA1-201ENST00000344337 MPRIPQ6WCQ1 1025 aa9.24□□□□□ -0.93
KPNA1-201ENST00000344337 RALYLQ86SE5 291 aaKnown RBP9.24□□□□□ -0.93
KPNA1-201ENST00000344337 NUCB1Q02818 461 aa9.24□□□□□ -0.93
KPNA1-201ENST00000344337 SF3A3Q12874 501 aaKnown RBP eCLIP9.24□□□□□ -0.93
KPNA1-201ENST00000344337 RSPH4AQ5TD94 716 aa9.24□□□□□ -0.93
KPNA1-201ENST00000344337 CWC22Q9HCG8 908 aaKnown RBP9.24□□□□□ -0.93
KPNA1-201ENST00000344337 RPRD2Q5VT52 1461 aaKnown RBP9.24□□□□□ -0.93
KPNA1-201ENST00000344337 TTC5Q8N0Z6 440 aa9.23□□□□□ -0.93
KPNA1-201ENST00000344337 ZC3H6P61129 1189 aaKnown RBP9.23□□□□□ -0.93
KPNA1-201ENST00000344337 MAP3K11Q16584 847 aa9.23□□□□□ -0.93
KPNA1-201ENST00000344337 CFAP100Q494V2 611 aa9.23□□□□□ -0.93
KPNA1-201ENST00000344337 CCDC30Q5VVM6 783 aa9.23□□□□□ -0.93
KPNA1-201ENST00000344337 CAGE1Q8TC20 777 aa9.23□□□□□ -0.93
KPNA1-201ENST00000344337 CCDC34Q96HJ3 373 aa9.23□□□□□ -0.93
KPNA1-201ENST00000344337 TSR1Q2NL82 804 aaKnown RBP9.23□□□□□ -0.93
KPNA1-201ENST00000344337 EPRSP07814 1512 aaKnown RBP9.23□□□□□ -0.93
KPNA1-201ENST00000344337 PTCD1O75127 700 aaKnown RBP9.23□□□□□ -0.93
KPNA1-201ENST00000344337 LIG1P18858 919 aa9.23□□□□□ -0.93
KPNA1-201ENST00000344337 TRDNQ13061 729 aa9.23□□□□□ -0.93
KPNA1-201ENST00000344337 NFE2L2Q16236 605 aa9.23□□□□□ -0.93
KPNA1-201ENST00000344337 GPATCH11Q8N954 259 aa9.23□□□□□ -0.93
KPNA1-201ENST00000344337 MAP7D2Q96T17 732 aa9.23□□□□□ -0.93
KPNA1-201ENST00000344337 DNAJC25Q9H1X3 360 aa9.23□□□□□ -0.93
KPNA1-201ENST00000344337 ERBB4Q15303 1308 aa9.23□□□□□ -0.93
KPNA1-201ENST00000344337 THOC2Q8NI27 1593 aaKnown RBP9.23□□□□□ -0.93
KPNA1-201ENST00000344337 ATP5J2-PTCD1G3V325 749 aa9.22□□□□□ -0.93
KPNA1-201ENST00000344337 GTF3C6Q969F1 213 aa9.22□□□□□ -0.93
KPNA1-201ENST00000344337 CCDC102AQ96A19 550 aa9.22□□□□□ -0.93
KPNA1-201ENST00000344337 HINFPQ9BQA5 517 aa9.22□□□□□ -0.93
KPNA1-201ENST00000344337 PTPN14Q15678 1187 aa9.22□□□□□ -0.93
KPNA1-201ENST00000344337 KDM2BQ8NHM5 1336 aa9.22□□□□□ -0.93
KPNA1-201ENST00000344337 ZNF526Q8TF50 670 aaPredicted RBP9.22□□□□□ -0.93
KPNA1-201ENST00000344337 ANO6Q4KMQ2 910 aa9.22□□□□□ -0.93
KPNA1-201ENST00000344337 TESK2Q96S53 571 aa9.22□□□□□ -0.93
KPNA1-201ENST00000344337 PHACTR2O75167 634 aa9.22□□□□□ -0.93
KPNA1-201ENST00000344337 HMGN5P82970 282 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms