RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 FKBP4Q02790 459 aaKnown RBP eCLIP10.33□□□□□ -0.76
FGD6-201ENST00000343958 SYCE3A1L190 88 aa10.33□□□□□ -0.76
FGD6-201ENST00000343958 BLOC1S2Q6QNY1 142 aa10.33□□□□□ -0.76
FGD6-201ENST00000343958 TNMDQ9H2S6 317 aa10.33□□□□□ -0.76
FGD6-201ENST00000343958 ABCC11Q96J66 1382 aa10.33□□□□□ -0.76
FGD6-201ENST00000343958 MPRIPQ6WCQ1 1025 aa10.33□□□□□ -0.76
FGD6-201ENST00000343958 LRRFIP2Q9Y608 721 aaKnown RBP10.33□□□□□ -0.76
FGD6-201ENST00000343958 CASTP20810 708 aaKnown RBP10.33□□□□□ -0.76
FGD6-201ENST00000343958 UGGT2Q9NYU1 1516 aa10.33□□□□□ -0.76
FGD6-201ENST00000343958 ZNF396Q96N95 335 aaPredicted RBP10.33□□□□□ -0.76
FGD6-201ENST00000343958 TRIM34Q9BYJ4 488 aa10.33□□□□□ -0.76
FGD6-201ENST00000343958 BOLA2Q9H3K6 86 aa10.33□□□□□ -0.76
FGD6-201ENST00000343958 TBC1D9Q6ZT07 1266 aa10.32□□□□□ -0.76
FGD6-201ENST00000343958 AMOTL2Q9Y2J4 779 aa10.32□□□□□ -0.76
FGD6-201ENST00000343958 CAMK4Q16566 473 aa10.32□□□□□ -0.76
FGD6-201ENST00000343958 C8orf34Q49A92 452 aa10.32□□□□□ -0.76
FGD6-201ENST00000343958 CUL7Q14999 1698 aa10.32□□□□□ -0.76
FGD6-201ENST00000343958 ANKLE2Q86XL3 938 aa10.32□□□□□ -0.76
FGD6-201ENST00000343958 KIF14Q15058 1648 aa10.32□□□□□ -0.76
FGD6-201ENST00000343958 KINO60870 393 aaKnown RBP10.32□□□□□ -0.76
FGD6-201ENST00000343958 ZSCAN31Q96LW9 406 aaPredicted RBP10.32□□□□□ -0.76
FGD6-201ENST00000343958 BIVM-ERCC5R4GMW8 1640 aa10.32□□□□□ -0.76
FGD6-201ENST00000343958 ANKRD20A12PQ8NF67 263 aa10.32□□□□□ -0.76
FGD6-201ENST00000343958 JARID2Q92833 1246 aaPredicted RBP10.31□□□□□ -0.76
FGD6-201ENST00000343958 MEX3CQ5U5Q3 659 aaKnown RBP10.31□□□□□ -0.76
FGD6-201ENST00000343958 SPATA32Q96LK8 384 aa10.31□□□□□ -0.76
FGD6-201ENST00000343958 ANXA1P04083 346 aa10.31□□□□□ -0.76
FGD6-201ENST00000343958 PLEKHH1Q9ULM0 1364 aa10.31□□□□□ -0.76
FGD6-201ENST00000343958 LAMC3Q9Y6N6 1575 aa10.31□□□□□ -0.76
FGD6-201ENST00000343958 C16orf71Q8IYS4 520 aaPredicted RBP10.31□□□□□ -0.76
FGD6-201ENST00000343958 ATP10BO94823 1461 aa10.31□□□□□ -0.76
FGD6-201ENST00000343958 BRPF1P55201 1214 aaPredicted RBP10.31□□□□□ -0.76
FGD6-201ENST00000343958 KRT85P78386 507 aa10.31□□□□□ -0.76
FGD6-201ENST00000343958 NUP153P49790 1475 aaKnown RBP10.3□□□□□ -0.76
FGD6-201ENST00000343958 RLBP1P12271 317 aa10.3□□□□□ -0.76
FGD6-201ENST00000343958 NUP133Q8WUM0 1156 aa10.3□□□□□ -0.76
FGD6-201ENST00000343958 TESK2Q96S53 571 aa10.3□□□□□ -0.76
FGD6-201ENST00000343958 NAT10Q9H0A0 1025 aaKnown RBP10.3□□□□□ -0.76
FGD6-201ENST00000343958 GDPD2Q9HCC8 539 aa10.3□□□□□ -0.76
FGD6-201ENST00000343958 RBM27Q9P2N5 1060 aaKnown RBP10.3□□□□□ -0.76
FGD6-201ENST00000343958 KIF1BPQ96EK5 621 aa10.3□□□□□ -0.76
FGD6-201ENST00000343958 CARD14Q9BXL6 1004 aa10.3□□□□□ -0.76
FGD6-201ENST00000343958 PEG3Q9GZU2 1588 aa10.3□□□□□ -0.76
FGD6-201ENST00000343958 RALGAPBQ86X10 1494 aa10.3□□□□□ -0.76
FGD6-201ENST00000343958 NUTM2BA6NNL0 878 aaPredicted RBP10.3□□□□□ -0.76
FGD6-201ENST00000343958 NUTM2EB1AL46 878 aaPredicted RBP10.3□□□□□ -0.76
FGD6-201ENST00000343958 NUTM2AQ8IVF1 878 aaPredicted RBP10.3□□□□□ -0.76
FGD6-201ENST00000343958 ME1P48163 572 aa10.3□□□□□ -0.76
FGD6-201ENST00000343958 PARD3Q8TEW0 1356 aa10.3□□□□□ -0.76
FGD6-201ENST00000343958 CCDC192P0DO97 292 aa10.3□□□□□ -0.76
FGD6-201ENST00000343958 TBC1D32Q96NH3 1257 aa10.3□□□□□ -0.76
FGD6-201ENST00000343958 PDCP20941 246 aa10.3□□□□□ -0.76
FGD6-201ENST00000343958 MRPL50Q8N5N7 158 aaKnown RBP10.3□□□□□ -0.76
FGD6-201ENST00000343958 C8orf58Q8NAV2 365 aa10.3□□□□□ -0.76
FGD6-201ENST00000343958 ANKRD1Q15327 319 aa10.29□□□□□ -0.76
FGD6-201ENST00000343958 CEP89Q96ST8 783 aa10.29□□□□□ -0.76
FGD6-201ENST00000343958 ESPNB1AK53 854 aa10.29□□□□□ -0.76
FGD6-201ENST00000343958 PHF8Q9UPP1 1060 aa10.29□□□□□ -0.76
FGD6-201ENST00000343958 CCDC57Q2TAC2 916 aa10.29□□□□□ -0.76
FGD6-201ENST00000343958 DNAAF4Q8WXU2 420 aa10.29□□□□□ -0.76
FGD6-201ENST00000343958 NUP62CLQ9H1M0 184 aa10.29□□□□□ -0.76
FGD6-201ENST00000343958 BRMS1Q9HCU9 246 aa10.29□□□□□ -0.76
FGD6-201ENST00000343958 PRAG1Q86YV5 1406 aa10.29□□□□□ -0.76
FGD6-201ENST00000343958 GUCY1B3Q02153 619 aa10.29□□□□□ -0.76
FGD6-201ENST00000343958 ACEP12821 1306 aa10.29□□□□□ -0.76
FGD6-201ENST00000343958 TSPYL6Q8N831 410 aa10.29□□□□□ -0.76
FGD6-201ENST00000343958 UQCRHLA0A096LP55 91 aa10.29□□□□□ -0.76
FGD6-201ENST00000343958 UQCRHP07919 91 aa10.29□□□□□ -0.76
FGD6-201ENST00000343958 NAP1L1P55209 391 aaKnown RBP10.29□□□□□ -0.76
FGD6-201ENST00000343958 FAM135AQ9P2D6 1515 aa10.29□□□□□ -0.76
FGD6-201ENST00000343958 FLIIQ13045 1269 aa10.28□□□□□ -0.76
FGD6-201ENST00000343958 TTC22Q5TAA0 569 aa10.28□□□□□ -0.76
FGD6-201ENST00000343958 SART3Q15020 963 aaKnown RBP10.28□□□□□ -0.76
FGD6-201ENST00000343958 IPO7O95373 1038 aaKnown RBP10.28□□□□□ -0.76
FGD6-201ENST00000343958 SEC24BO95487 1268 aa10.28□□□□□ -0.76
FGD6-201ENST00000343958 MEIS3Q99687 375 aa10.28□□□□□ -0.76
FGD6-201ENST00000343958 TCOF1Q13428 1488 aaKnown RBP10.28□□□□□ -0.76
FGD6-201ENST00000343958 CCDC69A6NI79 296 aa10.28□□□□□ -0.76
FGD6-201ENST00000343958 KRT24Q2M2I5 525 aa10.28□□□□□ -0.76
FGD6-201ENST00000343958 BICDL1Q6ZP65 573 aa10.28□□□□□ -0.76
FGD6-201ENST00000343958 PIBF1Q8WXW3 757 aa10.28□□□□□ -0.76
FGD6-201ENST00000343958 PTCD1O75127 700 aaKnown RBP10.28□□□□□ -0.76
FGD6-201ENST00000343958 CEP126Q9P2H0 1117 aa10.28□□□□□ -0.76
FGD6-201ENST00000343958 RAB11FIP3O75154 756 aa10.28□□□□□ -0.76
FGD6-201ENST00000343958 XBP1P17861 261 aa10.28□□□□□ -0.76
FGD6-201ENST00000343958 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.28□□□□□ -0.76
FGD6-201ENST00000343958 NUCB1Q02818 461 aa10.27□□□□□ -0.76
FGD6-201ENST00000343958 PPP6R1Q9UPN7 881 aa10.27□□□□□ -0.76
FGD6-201ENST00000343958 PPFIA3O75145 1194 aa10.27□□□□□ -0.76
FGD6-201ENST00000343958 SERPINC1P01008 464 aa10.27□□□□□ -0.77
FGD6-201ENST00000343958 GPS2Q13227 327 aa10.27□□□□□ -0.77
FGD6-201ENST00000343958 TRAPPC8Q9Y2L5 1435 aa10.27□□□□□ -0.77
FGD6-201ENST00000343958 FANCAO15360 1455 aa10.27□□□□□ -0.77
FGD6-201ENST00000343958 ANKRD36BQ8N2N9 1353 aa10.27□□□□□ -0.77
FGD6-201ENST00000343958 HSP90AB2PQ58FF8 381 aa10.27□□□□□ -0.77
FGD6-201ENST00000343958 CTDP1Q9Y5B0 961 aaPredicted RBP10.27□□□□□ -0.77
FGD6-201ENST00000343958 GLRX3O76003 335 aaKnown RBP10.26□□□□□ -0.77
FGD6-201ENST00000343958 PRDM11Q9NQV5 511 aa10.26□□□□□ -0.77
FGD6-201ENST00000343958 IDH1O75874 414 aaKnown RBP10.26□□□□□ -0.77
FGD6-201ENST00000343958 CCDC70Q6NSX1 233 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms