RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 TNIKQ9UKE5 1360 aa7.19□□□□□ -1.26
VCAN-203ENST00000343200 ERC2O15083 957 aa7.19□□□□□ -1.26
VCAN-203ENST00000343200 ZC4H2Q9NQZ6 224 aa7.19□□□□□ -1.26
VCAN-203ENST00000343200 STIM2Q9P246 746 aa7.19□□□□□ -1.26
VCAN-203ENST00000343200 SMTNL1A8MU46 457 aa7.19□□□□□ -1.26
VCAN-203ENST00000343200 UBE4AQ14139 1066 aa7.19□□□□□ -1.26
VCAN-203ENST00000343200 NGEFQ8N5V2 710 aa7.19□□□□□ -1.26
VCAN-203ENST00000343200 GBP1P32455 592 aa7.19□□□□□ -1.26
VCAN-203ENST00000343200 DBN1Q16643 649 aa7.19□□□□□ -1.26
VCAN-203ENST00000343200 TSNAXIP1Q2TAA8 658 aa7.19□□□□□ -1.26
VCAN-203ENST00000343200 CLNS1AP54105 237 aaKnown RBP7.19□□□□□ -1.26
VCAN-203ENST00000343200 PPFIA2O75334 1257 aa7.19□□□□□ -1.26
VCAN-203ENST00000343200 CDC45O75419 566 aa7.19□□□□□ -1.26
VCAN-203ENST00000343200 TTC14Q96N46 770 aa7.19□□□□□ -1.26
VCAN-203ENST00000343200 RSPH14Q9UHP6 348 aa7.19□□□□□ -1.26
VCAN-203ENST00000343200 CHD5Q8TDI0 1954 aa7.19□□□□□ -1.26
VCAN-203ENST00000343200 FIBPO43427 364 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 BUB1BO60566 1050 aaPredicted RBP7.18□□□□□ -1.26
VCAN-203ENST00000343200 CAVIN2O95810 425 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 CRBNQ96SW2 442 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 SCN1AP35498 2009 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 CAPN2P17655 700 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 ALS2CR12Q96Q35 445 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 MICALL1Q8N3F8 863 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 HSP90AB4PQ58FF6 505 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 SLC4A10Q6U841 1118 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 TAF4BQ92750 862 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 CCDC88AQ3V6T2 1871 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 PLEKHH2Q8IVE3 1493 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 KRT85P78386 507 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 LMNTD2Q8IXW0 634 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 VCX3BQ9H321 246 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 TRIM35Q9UPQ4 493 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 SYCE3A1L190 88 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 AIMP1Q12904 312 aaKnown RBP7.18□□□□□ -1.26
VCAN-203ENST00000343200 MAP7Q14244 749 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 CLUAP1Q96AJ1 413 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 GOPCQ9HD26 462 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 HSF2BPO75031 334 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 CDK5RAP3Q96JB5 506 aa7.18□□□□□ -1.26
VCAN-203ENST00000343200 ANKRD1Q15327 319 aa7.17□□□□□ -1.26
VCAN-203ENST00000343200 OTUD6BQ8N6M0 293 aa7.17□□□□□ -1.26
VCAN-203ENST00000343200 IFT74Q96LB3 600 aa7.17□□□□□ -1.26
VCAN-203ENST00000343200 KIF21AQ7Z4S6 1674 aa7.17□□□□□ -1.26
VCAN-203ENST00000343200 MPDZO75970 2070 aa7.17□□□□□ -1.26
VCAN-203ENST00000343200 VPS36Q86VN1 386 aa7.17□□□□□ -1.26
VCAN-203ENST00000343200 A6NNZ2 444 aa7.17□□□□□ -1.26
VCAN-203ENST00000343200 CLCN1P35523 988 aa7.17□□□□□ -1.26
VCAN-203ENST00000343200 MAP3K11Q16584 847 aa7.17□□□□□ -1.26
VCAN-203ENST00000343200 TUBB8Q3ZCM7 444 aa7.17□□□□□ -1.26
VCAN-203ENST00000343200 RALYLQ86SE5 291 aaKnown RBP7.17□□□□□ -1.26
VCAN-203ENST00000343200 TSPYL2Q9H2G4 693 aaPredicted RBP7.17□□□□□ -1.26
VCAN-203ENST00000343200 CCDC183Q5T5S1 534 aa7.17□□□□□ -1.26
VCAN-203ENST00000343200 LUC7L3O95232 432 aaKnown RBP7.17□□□□□ -1.26
VCAN-203ENST00000343200 SPA17Q15506 151 aa7.17□□□□□ -1.26
VCAN-203ENST00000343200 UPF3BQ9BZI7 483 aaKnown RBP7.17□□□□□ -1.26
VCAN-203ENST00000343200 LACTBP83111 547 aaPredicted RBP7.17□□□□□ -1.26
VCAN-203ENST00000343200 VCXQ9H320 206 aa7.17□□□□□ -1.26
VCAN-203ENST00000343200 SPATS2LQ9NUQ6 558 aaKnown RBP7.17□□□□□ -1.26
VCAN-203ENST00000343200 KIF4AO95239 1232 aa7.17□□□□□ -1.26
VCAN-203ENST00000343200 FERP16591 822 aa7.17□□□□□ -1.26
VCAN-203ENST00000343200 ME1P48163 572 aa7.17□□□□□ -1.26
VCAN-203ENST00000343200 WDR63Q8IWG1 891 aa7.16□□□□□ -1.26
VCAN-203ENST00000343200 CACNA2D3Q8IZS8 1091 aa7.16□□□□□ -1.26
VCAN-203ENST00000343200 DCAF11Q8TEB1 546 aa7.16□□□□□ -1.26
VCAN-203ENST00000343200 MAP3K7CLP57077 242 aa7.16□□□□□ -1.26
VCAN-203ENST00000343200 VGLL3A8MV65 326 aa7.16□□□□□ -1.26
VCAN-203ENST00000343200 USO1O60763 962 aaKnown RBP7.16□□□□□ -1.26
VCAN-203ENST00000343200 XPCQ01831 940 aaPredicted RBP7.16□□□□□ -1.26
VCAN-203ENST00000343200 OTOFQ9HC10 1997 aa7.16□□□□□ -1.26
VCAN-203ENST00000343200 URB1O60287 2271 aaKnown RBP7.16□□□□□ -1.26
VCAN-203ENST00000343200 GSTTP1A0A1W2PQM5 241 aa7.16□□□□□ -1.26
VCAN-203ENST00000343200 CEP135Q66GS9 1140 aa7.16□□□□□ -1.26
VCAN-203ENST00000343200 HOOK3Q86VS8 718 aa7.16□□□□□ -1.26
VCAN-203ENST00000343200 CLIP2Q9UDT6 1046 aa7.16□□□□□ -1.26
VCAN-203ENST00000343200 MKRN1Q9UHC7 482 aaKnown RBP7.16□□□□□ -1.26
VCAN-203ENST00000343200 ANAPC4Q9UJX5 808 aa7.16□□□□□ -1.26
VCAN-203ENST00000343200 VPS8Q8N3P4 1428 aa7.16□□□□□ -1.26
VCAN-203ENST00000343200 RPAINQ86UA6 219 aa7.16□□□□□ -1.26
VCAN-203ENST00000343200 ANAPC15P60006 121 aa7.16□□□□□ -1.26
VCAN-203ENST00000343200 CCDC27Q2M243 656 aa7.16□□□□□ -1.26
VCAN-203ENST00000343200 FAM114A2Q9NRY5 505 aa7.16□□□□□ -1.26
VCAN-203ENST00000343200 FSD2A1L4K1 749 aa7.16□□□□□ -1.26
VCAN-203ENST00000343200 SART3Q15020 963 aaKnown RBP7.16□□□□□ -1.26
VCAN-203ENST00000343200 RAI14Q9P0K7 980 aa7.16□□□□□ -1.26
VCAN-203ENST00000343200 LOXHD1Q8IVV2 1947 aa7.16□□□□□ -1.26
VCAN-203ENST00000343200 HIP1O00291 1037 aa7.15□□□□□ -1.26
VCAN-203ENST00000343200 PDCD7Q8N8D1 485 aaKnown RBP7.15□□□□□ -1.26
VCAN-203ENST00000343200 RAB3IL1Q8TBN0 382 aa7.15□□□□□ -1.26
VCAN-203ENST00000343200 STMN2Q93045 179 aa7.15□□□□□ -1.26
VCAN-203ENST00000343200 DDX27Q96GQ7 796 aaKnown RBP7.15□□□□□ -1.26
VCAN-203ENST00000343200 HDGFL2Q7Z4V5 671 aaPredicted RBP7.15□□□□□ -1.26
VCAN-203ENST00000343200 NUP62CLQ9H1M0 184 aa7.15□□□□□ -1.26
VCAN-203ENST00000343200 RP1L1Q8IWN7 2480 aaPredicted RBP7.15□□□□□ -1.26
VCAN-203ENST00000343200 CETN2P41208 172 aa7.15□□□□□ -1.26
VCAN-203ENST00000343200 CTAGE6Q86UF2 777 aa7.15□□□□□ -1.26
VCAN-203ENST00000343200 CCDC114Q96M63 670 aa7.15□□□□□ -1.26
VCAN-203ENST00000343200 CUX1P39880 1505 aa7.15□□□□□ -1.26
VCAN-203ENST00000343200 CEP104O60308 925 aa7.15□□□□□ -1.26
VCAN-203ENST00000343200 HS1BP3Q53T59 392 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms