RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 KDRP35968 1356 aa29.43■■■□□ 2.3
RBM38-201ENST00000342690 SULT6B1Q6IMI4 303 aa29.43■■■□□ 2.3
RBM38-201ENST00000342690 MARCH10Q8NA82 808 aaPredicted RBP29.42■■■□□ 2.3
RBM38-201ENST00000342690 U2SURPO15042 1029 aaKnown RBP29.41■■■□□ 2.3
RBM38-201ENST00000342690 ZCRB1Q8TBF4 217 aaKnown RBP29.4■■■□□ 2.3
RBM38-201ENST00000342690 HMOX1P09601 288 aa29.39■■■□□ 2.3
RBM38-201ENST00000342690 NUDCQ9Y266 331 aa29.38■■■□□ 2.29
RBM38-201ENST00000342690 PLEKHG2Q9H7P9 1386 aa29.37■■■□□ 2.29
RBM38-201ENST00000342690 SOCS7O14512 581 aa29.35■■■□□ 2.29
RBM38-201ENST00000342690 FAM196AQ6ZSG2 479 aa29.35■■■□□ 2.29
RBM38-201ENST00000342690 DDX54Q8TDD1 881 aaKnown RBP29.35■■■□□ 2.29
RBM38-201ENST00000342690 UPF1Q92900 1129 aaKnown RBP eCLIP29.33■■■□□ 2.293e-6■■□□□ 13.7
RBM38-201ENST00000342690 PCDH11XQ9BZA7 1347 aa29.33■■■□□ 2.29
RBM38-201ENST00000342690 PCDH11YQ9BZA8 1340 aa29.33■■■□□ 2.29
RBM38-201ENST00000342690 BCL9O00512 1426 aa29.33■■■□□ 2.29
RBM38-201ENST00000342690 EP400Q96L91 3159 aa29.32■■■□□ 2.28
RBM38-201ENST00000342690 SBF2Q86WG5 1849 aa29.32■■■□□ 2.28
RBM38-201ENST00000342690 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.32■■■□□ 2.28
RBM38-201ENST00000342690 SPG7Q9UQ90 795 aa29.32■■■□□ 2.28
RBM38-201ENST00000342690 U2AF1L5P0DN76 240 aaPredicted RBP29.31■■■□□ 2.28
RBM38-201ENST00000342690 U2AF1Q01081 240 aaKnown RBP eCLIP29.31■■■□□ 2.28
RBM38-201ENST00000342690 CYP27B1O15528 508 aa29.3■■■□□ 2.28
RBM38-201ENST00000342690 RSPH6AQ9H0K4 717 aa29.29■■■□□ 2.28
RBM38-201ENST00000342690 MRS2Q9HD23 443 aa29.29■■■□□ 2.28
RBM38-201ENST00000342690 PLEKHO1Q53GL0 409 aaPredicted RBP29.28■■■□□ 2.28
RBM38-201ENST00000342690 TNS1Q9HBL0 1735 aaKnown RBP29.28■■■□□ 2.28
RBM38-201ENST00000342690 DOT1LQ8TEK3 1739 aa29.26■■■□□ 2.27
RBM38-201ENST00000342690 AMOTQ4VCS5 1084 aa29.26■■■□□ 2.27
RBM38-201ENST00000342690 MIER1Q8N108 512 aa29.26■■■□□ 2.27
RBM38-201ENST00000342690 NHSQ6T4R5 1651 aa29.25■■■□□ 2.27
RBM38-201ENST00000342690 TRIM37O94972 964 aa29.25■■■□□ 2.27
RBM38-201ENST00000342690 PRKAR2BP31323 418 aa29.25■■■□□ 2.27
RBM38-201ENST00000342690 WDR43Q15061 677 aaKnown RBP eCLIP29.24■■■□□ 2.27
RBM38-201ENST00000342690 CCDC184Q52MB2 194 aa29.24■■■□□ 2.27
RBM38-201ENST00000342690 ZNF530Q6P9A1 599 aaPredicted RBP29.24■■■□□ 2.27
RBM38-201ENST00000342690 CCER2I3L3R5 266 aa29.23■■■□□ 2.27
RBM38-201ENST00000342690 PHKG2P15735 406 aa29.23■■■□□ 2.27
RBM38-201ENST00000342690 TOGARAM1Q9Y4F4 1720 aa29.23■■■□□ 2.27
RBM38-201ENST00000342690 FCHSD2O94868 740 aa29.22■■■□□ 2.27
RBM38-201ENST00000342690 IFNL2Q8IZJ0 200 aa29.22■■■□□ 2.27
RBM38-201ENST00000342690 ACSBG1Q96GR2 724 aa29.22■■■□□ 2.27
RBM38-201ENST00000342690 CCDC125Q86Z20 511 aa29.21■■■□□ 2.27
RBM38-201ENST00000342690 NKX1-1Q15270 411 aaPredicted RBP29.2■■■□□ 2.26
RBM38-201ENST00000342690 PTF1AQ7RTS3 328 aa29.2■■■□□ 2.26
RBM38-201ENST00000342690 MTHFSDQ2M296 383 aaKnown RBP29.19■■■□□ 2.26
RBM38-201ENST00000342690 KCNQ2O43526 872 aa29.18■■■□□ 2.26
RBM38-201ENST00000342690 PHACTR3Q96KR7 559 aa29.18■■■□□ 2.26
RBM38-201ENST00000342690 BCL11BQ9C0K0 894 aaPredicted RBP29.17■■■□□ 2.26
RBM38-201ENST00000342690 SF3B2Q13435 895 aaKnown RBP29.16■■■□□ 2.26
RBM38-201ENST00000342690 C1orf141Q5JVX7 400 aa29.16■■■□□ 2.26
RBM38-201ENST00000342690 KDM6AO15550 1401 aaPredicted RBP29.15■■■□□ 2.26
RBM38-201ENST00000342690 PLEKHF1Q96S99 279 aa29.15■■■□□ 2.26
RBM38-201ENST00000342690 AKAP4Q5JQC9 854 aa29.14■■■□□ 2.26
RBM38-201ENST00000342690 PNNQ9H307 717 aaKnown RBP29.14■■■□□ 2.26
RBM38-201ENST00000342690 BTAF1O14981 1849 aa29.14■■■□□ 2.26
RBM38-201ENST00000342690 ITGB4P16144 1822 aa29.13■■■□□ 2.25
RBM38-201ENST00000342690 KAT6BQ8WYB5 2073 aa29.13■■■□□ 2.25
RBM38-201ENST00000342690 HSP90AB1P08238 724 aaKnown RBP29.13■■■□□ 2.25
RBM38-201ENST00000342690 PRIM1P49642 420 aaKnown RBP29.13■■■□□ 2.25
RBM38-201ENST00000342690 GAS2L2Q8NHY3 880 aa29.13■■■□□ 2.25
RBM38-201ENST00000342690 PNISRQ8TF01 805 aaKnown RBP29.12■■■□□ 2.25
RBM38-201ENST00000342690 SYTL4Q96C24 671 aaPredicted RBP29.12■■■□□ 2.25
RBM38-201ENST00000342690 ADAMTS8Q9UP79 889 aa29.12■■■□□ 2.25
RBM38-201ENST00000342690 SCN11AQ9UI33 1791 aa29.11■■■□□ 2.25
RBM38-201ENST00000342690 APBA3O96018 575 aa29.11■■■□□ 2.25
RBM38-201ENST00000342690 NEFMP07197 916 aa29.11■■■□□ 2.25
RBM38-201ENST00000342690 DEFB132Q7Z7B7 95 aa29.11■■■□□ 2.25
RBM38-201ENST00000342690 DCAF5Q96JK2 942 aa29.11■■■□□ 2.25
RBM38-201ENST00000342690 VIRMAQ69YN4 1812 aaKnown RBP29.1■■■□□ 2.25
RBM38-201ENST00000342690 ADAMTS7Q9UKP4 1686 aa29.09■■■□□ 2.25
RBM38-201ENST00000342690 BAG6P46379 1132 aa29.09■■■□□ 2.25
RBM38-201ENST00000342690 MPRIPQ6WCQ1 1025 aa29.09■■■□□ 2.25
RBM38-201ENST00000342690 MAP3K5Q99683 1374 aa29.09■■■□□ 2.25
RBM38-201ENST00000342690 RGPD3A6NKT7 1758 aaPredicted RBP29.06■■■□□ 2.24
RBM38-201ENST00000342690 RGPD4Q7Z3J3 1758 aa29.06■■■□□ 2.24
RBM38-201ENST00000342690 MAPK8IP3Q9UPT6 1336 aa29.06■■■□□ 2.24
RBM38-201ENST00000342690 EN1Q05925 392 aaPredicted RBP29.06■■■□□ 2.24
RBM38-201ENST00000342690 CCDC146Q8IYE0 955 aa29.06■■■□□ 2.24
RBM38-201ENST00000342690 FAM9BQ8IZU0 186 aa29.05■■■□□ 2.24
RBM38-201ENST00000342690 DLG5Q8TDM6 1919 aa29.04■■■□□ 2.24
RBM38-201ENST00000342690 GNAT3A8MTJ3 354 aa29.04■■■□□ 2.24
RBM38-201ENST00000342690 RNMTO43148 476 aaKnown RBP29.04■■■□□ 2.24
RBM38-201ENST00000342690 LGR6Q9HBX8 967 aa29.04■■■□□ 2.24
RBM38-201ENST00000342690 ERVV-2B6SEH9 535 aa29.03■■■□□ 2.24
RBM38-201ENST00000342690 MRC1P22897 1456 aa29.03■■■□□ 2.24
RBM38-201ENST00000342690 PIGBQ92521 554 aa29.02■■■□□ 2.24
RBM38-201ENST00000342690 RUNDC1Q96C34 613 aa29.02■■■□□ 2.24
RBM38-201ENST00000342690 CAMKK2Q96RR4 588 aa29.02■■■□□ 2.24
RBM38-201ENST00000342690 TMOD3Q9NYL9 352 aa29.02■■■□□ 2.24
RBM38-201ENST00000342690 RREB1Q92766 1687 aa29.02■■■□□ 2.24
RBM38-201ENST00000342690 PLSCR1O15162 318 aa29.01■■■□□ 2.23
RBM38-201ENST00000342690 EZH2Q15910 746 aaKnown RBP29.01■■■□□ 2.23
RBM38-201ENST00000342690 NFE2L2Q16236 605 aa29.01■■■□□ 2.23
RBM38-201ENST00000342690 CABP4P57796 275 aa29■■■□□ 2.23
RBM38-201ENST00000342690 IL17REQ8NFR9 667 aa28.98■■■□□ 2.23
RBM38-201ENST00000342690 LY75O60449 1722 aa28.97■■■□□ 2.23
RBM38-201ENST00000342690 SLC52A2Q9HAB3 445 aa28.96■■■□□ 2.23
RBM38-201ENST00000342690 NUP188Q5SRE5 1749 aa28.96■■■□□ 2.23
RBM38-201ENST00000342690 CEMIPQ8WUJ3 1361 aa28.96■■■□□ 2.23
RBM38-201ENST00000342690 TMPOP42166 694 aaKnown RBP28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms