RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 FYB1O15117 783 aa20.64■□□□□ 0.9
SYDE2-202ENST00000341460 NEMFO60524 1076 aa20.64■□□□□ 0.9
SYDE2-202ENST00000341460 TXLNAP40222 546 aa20.64■□□□□ 0.9
SYDE2-202ENST00000341460 TBC1D2BQ9UPU7 963 aa20.64■□□□□ 0.9
SYDE2-202ENST00000341460 SURF6O75683 361 aaKnown RBP20.64■□□□□ 0.9
SYDE2-202ENST00000341460 CNKSR2Q8WXI2 1034 aa20.64■□□□□ 0.89
SYDE2-202ENST00000341460 PPP2R1AP30153 589 aa20.64■□□□□ 0.89
SYDE2-202ENST00000341460 AKNAQ7Z591 1439 aa20.64■□□□□ 0.89
SYDE2-202ENST00000341460 AFAP1Q8N556 730 aa20.64■□□□□ 0.89
SYDE2-202ENST00000341460 PAIP2Q9BPZ3 127 aaKnown RBP20.64■□□□□ 0.89
SYDE2-202ENST00000341460 CPSF2Q9P2I0 782 aaKnown RBP20.64■□□□□ 0.89
SYDE2-202ENST00000341460 WASHC2AQ641Q2 1341 aa20.63■□□□□ 0.89
SYDE2-202ENST00000341460 PDE3AQ14432 1141 aa20.63■□□□□ 0.89
SYDE2-202ENST00000341460 PRKAR2BP31323 418 aa20.63■□□□□ 0.89
SYDE2-202ENST00000341460 CCAR1Q8IX12 1150 aaKnown RBP20.63■□□□□ 0.89
SYDE2-202ENST00000341460 SART3Q15020 963 aaKnown RBP20.62■□□□□ 0.89
SYDE2-202ENST00000341460 CCDC175P0C221 793 aa20.62■□□□□ 0.89
SYDE2-202ENST00000341460 RSPH14Q9UHP6 348 aa20.62■□□□□ 0.89
SYDE2-202ENST00000341460 KDM4AO75164 1064 aa20.62■□□□□ 0.89
SYDE2-202ENST00000341460 ME1P48163 572 aa20.62■□□□□ 0.89
SYDE2-202ENST00000341460 HIP1O00291 1037 aa20.62■□□□□ 0.89
SYDE2-202ENST00000341460 ESCO1Q5FWF5 840 aa20.61■□□□□ 0.89
SYDE2-202ENST00000341460 SCAPERQ9BY12 1400 aa20.61■□□□□ 0.89
SYDE2-202ENST00000341460 KIF5CO60282 957 aa20.61■□□□□ 0.89
SYDE2-202ENST00000341460 TXNDC2Q86VQ3 553 aa20.61■□□□□ 0.89
SYDE2-202ENST00000341460 SPATA32Q96LK8 384 aa20.61■□□□□ 0.89
SYDE2-202ENST00000341460 SMC1AQ14683 1233 aaKnown RBP20.61■□□□□ 0.89
SYDE2-202ENST00000341460 CCDC183Q5T5S1 534 aa20.61■□□□□ 0.89
SYDE2-202ENST00000341460 USP25Q9UHP3 1055 aa20.61■□□□□ 0.89
SYDE2-202ENST00000341460 KIF6Q6ZMV9 814 aa20.6■□□□□ 0.89
SYDE2-202ENST00000341460 GCC1Q96CN9 775 aa20.6■□□□□ 0.89
SYDE2-202ENST00000341460 KIF4BQ2VIQ3 1234 aa20.6■□□□□ 0.89
SYDE2-202ENST00000341460 TWISTNBQ3B726 338 aaPredicted RBP20.6■□□□□ 0.89
SYDE2-202ENST00000341460 SAMD1Q6SPF0 538 aaPredicted RBP20.6■□□□□ 0.89
SYDE2-202ENST00000341460 SMG6Q86US8 1419 aaKnown RBP20.6■□□□□ 0.89
SYDE2-202ENST00000341460 ERC1Q8IUD2 1116 aa20.6■□□□□ 0.89
SYDE2-202ENST00000341460 MICALL1Q8N3F8 863 aa20.6■□□□□ 0.89
SYDE2-202ENST00000341460 HSPA4P34932 840 aa20.6■□□□□ 0.89
SYDE2-202ENST00000341460 EXOSC9Q06265 439 aaKnown RBP20.6■□□□□ 0.89
SYDE2-202ENST00000341460 SYNJ2O15056 1496 aa20.59■□□□□ 0.89
SYDE2-202ENST00000341460 CLIP2Q9UDT6 1046 aa20.59■□□□□ 0.89
SYDE2-202ENST00000341460 HFM1A2PYH4 1435 aa20.59■□□□□ 0.89
SYDE2-202ENST00000341460 PRAM1Q96QH2 718 aa20.58■□□□□ 0.89
SYDE2-202ENST00000341460 RBM28Q9NW13 759 aaKnown RBP20.58■□□□□ 0.89
SYDE2-202ENST00000341460 ATP2B1P20020 1258 aa20.58■□□□□ 0.88
SYDE2-202ENST00000341460 CFAP100Q494V2 611 aa20.58■□□□□ 0.88
SYDE2-202ENST00000341460 VGLL3A8MV65 326 aa20.58■□□□□ 0.88
SYDE2-202ENST00000341460 ARAP1Q96P48 1450 aa20.57■□□□□ 0.88
SYDE2-202ENST00000341460 LARP1BQ659C4 914 aaKnown RBP20.57■□□□□ 0.88
SYDE2-202ENST00000341460 GBP6Q6ZN66 633 aa20.57■□□□□ 0.88
SYDE2-202ENST00000341460 C10orf67Q8IYJ2 551 aa20.57■□□□□ 0.88
SYDE2-202ENST00000341460 GIGYF2Q6Y7W6 1299 aaKnown RBP20.57■□□□□ 0.88
SYDE2-202ENST00000341460 TAF4BQ92750 862 aa20.57■□□□□ 0.88
SYDE2-202ENST00000341460 CDCA7LQ96GN5 454 aa20.57■□□□□ 0.88
SYDE2-202ENST00000341460 GNAI2P04899 355 aa20.57■□□□□ 0.88
SYDE2-202ENST00000341460 SPECC1LQ69YQ0 1117 aa20.56■□□□□ 0.88
SYDE2-202ENST00000341460 TMCO5BA8MYB1 307 aa20.56■□□□□ 0.88
SYDE2-202ENST00000341460 CEP135Q66GS9 1140 aa20.56■□□□□ 0.88
SYDE2-202ENST00000341460 CEP63Q96MT8 703 aa20.56■□□□□ 0.88
SYDE2-202ENST00000341460 A0A1B0GUL7 405 aa20.56■□□□□ 0.88
SYDE2-202ENST00000341460 PROSER2Q86WR7 435 aaPredicted RBP20.56■□□□□ 0.88
SYDE2-202ENST00000341460 KRI1Q8N9T8 703 aaKnown RBP20.56■□□□□ 0.88
SYDE2-202ENST00000341460 TRMT1Q9NXH9 659 aaKnown RBP20.56■□□□□ 0.88
SYDE2-202ENST00000341460 XRCC6P12956 609 aaKnown RBP eCLIP20.55■□□□□ 0.882e-6■■■■■ 34.5
SYDE2-202ENST00000341460 KLHL34Q8N239 644 aa20.55■□□□□ 0.88
SYDE2-202ENST00000341460 TATP17735 454 aaPredicted RBP20.55■□□□□ 0.88
SYDE2-202ENST00000341460 FEZ1Q99689 392 aa20.55■□□□□ 0.88
SYDE2-202ENST00000341460 RBM42Q9BTD8 480 aaKnown RBP20.55■□□□□ 0.88
SYDE2-202ENST00000341460 SYCP1Q15431 976 aa20.55■□□□□ 0.88
SYDE2-202ENST00000341460 ZNF692Q9BU19 519 aaPredicted RBP20.55■□□□□ 0.88
SYDE2-202ENST00000341460 CYP46A1Q9Y6A2 500 aa20.55■□□□□ 0.88
SYDE2-202ENST00000341460 SLC3A2P08195 630 aaKnown RBP20.55■□□□□ 0.88
SYDE2-202ENST00000341460 ANKRD1Q15327 319 aa20.55■□□□□ 0.88
SYDE2-202ENST00000341460 PRG4Q92954 1404 aaPredicted RBP20.54■□□□□ 0.88
SYDE2-202ENST00000341460 STIM1Q13586 685 aa20.54■□□□□ 0.88
SYDE2-202ENST00000341460 OGFRQ9NZT2 677 aa20.54■□□□□ 0.88
SYDE2-202ENST00000341460 IMMTQ16891 758 aaKnown RBP20.54■□□□□ 0.88
SYDE2-202ENST00000341460 WDR66Q8TBY9 1149 aa20.54■□□□□ 0.88
SYDE2-202ENST00000341460 ADCY5O95622 1261 aa20.54■□□□□ 0.88
SYDE2-202ENST00000341460 CCDC113Q9H0I3 377 aa20.53■□□□□ 0.88
SYDE2-202ENST00000341460 IKQ13123 557 aaPredicted RBP20.53■□□□□ 0.88
SYDE2-202ENST00000341460 FAM177BA6PVY3 158 aa20.53■□□□□ 0.88
SYDE2-202ENST00000341460 NOLC1Q14978 699 aaKnown RBP eCLIP20.53■□□□□ 0.88
SYDE2-202ENST00000341460 UVSSAQ2YD98 709 aa20.53■□□□□ 0.88
SYDE2-202ENST00000341460 AEBP2Q6ZN18 517 aaPredicted RBP20.53■□□□□ 0.88
SYDE2-202ENST00000341460 PNISRQ8TF01 805 aaKnown RBP20.53■□□□□ 0.88
SYDE2-202ENST00000341460 MTMR7Q9Y216 660 aa20.53■□□□□ 0.88
SYDE2-202ENST00000341460 GSDMDP57764 484 aa20.53■□□□□ 0.88
SYDE2-202ENST00000341460 SNW1Q13573 536 aaKnown RBP20.53■□□□□ 0.88
SYDE2-202ENST00000341460 TNPO1Q92973 898 aaKnown RBP20.53■□□□□ 0.88
SYDE2-202ENST00000341460 CEP57Q86XR8 500 aa20.52■□□□□ 0.88
SYDE2-202ENST00000341460 CCDC158Q5M9N0 1113 aa20.52■□□□□ 0.88
SYDE2-202ENST00000341460 A0A1B0GUA9 196 aa20.52■□□□□ 0.88
SYDE2-202ENST00000341460 IGSF3O75054 1194 aa20.52■□□□□ 0.88
SYDE2-202ENST00000341460 IFFO1Q0D2I5 559 aa20.52■□□□□ 0.88
SYDE2-202ENST00000341460 NOB1Q9ULX3 412 aaKnown RBP20.52■□□□□ 0.88
SYDE2-202ENST00000341460 HDGFL1Q5TGJ6 251 aa20.52■□□□□ 0.87
SYDE2-202ENST00000341460 SLC4A2P04920 1241 aa20.51■□□□□ 0.87
SYDE2-202ENST00000341460 SETSIPP0DME0 302 aa20.51■□□□□ 0.87
SYDE2-202ENST00000341460 CCT4P50991 539 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms