RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 GRIN3BO60391 1043 aa23.47■■□□□ 1.35
NECTIN1-202ENST00000340882 LTV1Q96GA3 475 aaPredicted RBP23.47■■□□□ 1.35
NECTIN1-202ENST00000340882 ANKRD36BQ8N2N9 1353 aa23.47■■□□□ 1.35
NECTIN1-202ENST00000340882 MSL1Q68DK7 614 aa23.46■■□□□ 1.35
NECTIN1-202ENST00000340882 IP6K1Q92551 441 aa23.44■■□□□ 1.34
NECTIN1-202ENST00000340882 SIN3AQ96ST3 1273 aa23.44■■□□□ 1.34
NECTIN1-202ENST00000340882 SLC12A5Q9H2X9 1139 aa23.44■■□□□ 1.34
NECTIN1-202ENST00000340882 MSH5O43196 834 aa23.43■■□□□ 1.34
NECTIN1-202ENST00000340882 CCNL1Q9UK58 526 aaPredicted RBP23.43■■□□□ 1.34
NECTIN1-202ENST00000340882 TMC1Q8TDI8 760 aa23.42■■□□□ 1.34
NECTIN1-202ENST00000340882 EDC4Q6P2E9 1401 aaKnown RBP23.42■■□□□ 1.34
NECTIN1-202ENST00000340882 C5P01031 1676 aa23.41■■□□□ 1.34
NECTIN1-202ENST00000340882 TAF1LQ8IZX4 1826 aa23.41■■□□□ 1.34
NECTIN1-202ENST00000340882 FBLN1P23142 703 aa23.41■■□□□ 1.34
NECTIN1-202ENST00000340882 MEGF6O75095 1541 aa23.41■■□□□ 1.34
NECTIN1-202ENST00000340882 A0A1W2PP64 1363 aa23.4■■□□□ 1.34
NECTIN1-202ENST00000340882 ADCY9O60503 1353 aa23.4■■□□□ 1.34
NECTIN1-202ENST00000340882 HDGFL2Q7Z4V5 671 aaPredicted RBP23.38■■□□□ 1.33
NECTIN1-202ENST00000340882 ZCRB1Q8TBF4 217 aaKnown RBP23.38■■□□□ 1.33
NECTIN1-202ENST00000340882 ZNF526Q8TF50 670 aaPredicted RBP23.38■■□□□ 1.33
NECTIN1-202ENST00000340882 GPBP1L1Q9HC44 474 aaPredicted RBP23.38■■□□□ 1.33
NECTIN1-202ENST00000340882 HSPA6P17066 643 aa23.37■■□□□ 1.33
NECTIN1-202ENST00000340882 MAP3K19Q56UN5 1328 aa23.35■■□□□ 1.33
NECTIN1-202ENST00000340882 HOXC9P31274 260 aa23.35■■□□□ 1.33
NECTIN1-202ENST00000340882 TOGARAM1Q9Y4F4 1720 aa23.34■■□□□ 1.33
NECTIN1-202ENST00000340882 CD2APQ9Y5K6 639 aa23.34■■□□□ 1.33
NECTIN1-202ENST00000340882 USP47Q96K76 1375 aa23.34■■□□□ 1.33
NECTIN1-202ENST00000340882 NEUROD1Q13562 356 aa23.33■■□□□ 1.33
NECTIN1-202ENST00000340882 WWC3Q9ULE0 1092 aa23.33■■□□□ 1.33
NECTIN1-202ENST00000340882 AMIGO3Q86WK7 504 aa23.32■■□□□ 1.32
NECTIN1-202ENST00000340882 SMIM5Q71RC9 77 aa23.31■■□□□ 1.32
NECTIN1-202ENST00000340882 USHBP1Q8N6Y0 703 aa23.3■■□□□ 1.32
NECTIN1-202ENST00000340882 TERF2IPQ9NYB0 399 aa23.3■■□□□ 1.32
NECTIN1-202ENST00000340882 ITGB4P16144 1822 aa23.3■■□□□ 1.32
NECTIN1-202ENST00000340882 UBR3Q6ZT12 1888 aa23.3■■□□□ 1.32
NECTIN1-202ENST00000340882 C4BP0C0L5 1744 aa23.29■■□□□ 1.32
NECTIN1-202ENST00000340882 AMPHP49418 695 aa23.29■■□□□ 1.32
NECTIN1-202ENST00000340882 NBPF6Q5VWK0 638 aa23.29■■□□□ 1.32
NECTIN1-202ENST00000340882 NBPF4Q96M43 638 aa23.29■■□□□ 1.32
NECTIN1-202ENST00000340882 KIF3CO14782 793 aa23.26■■□□□ 1.31
NECTIN1-202ENST00000340882 CARD11Q9BXL7 1154 aa23.26■■□□□ 1.31
NECTIN1-202ENST00000340882 IGSF1Q8N6C5 1336 aa23.26■■□□□ 1.31
NECTIN1-202ENST00000340882 COG3Q96JB2 828 aa23.25■■□□□ 1.31
NECTIN1-202ENST00000340882 PALLDQ8WX93 1383 aa23.25■■□□□ 1.31
NECTIN1-202ENST00000340882 RRS1Q15050 365 aaKnown RBP23.24■■□□□ 1.31
NECTIN1-202ENST00000340882 FLAD1Q8NFF5 587 aa23.23■■□□□ 1.31
NECTIN1-202ENST00000340882 MPRIPQ6WCQ1 1025 aa23.22■■□□□ 1.31
NECTIN1-202ENST00000340882 MAP2P11137 1827 aaKnown RBP23.22■■□□□ 1.31
NECTIN1-202ENST00000340882 PHF14O94880 888 aa23.2■■□□□ 1.3
NECTIN1-202ENST00000340882 KIAA1551Q9HCM1 1747 aa23.19■■□□□ 1.3
NECTIN1-202ENST00000340882 RTL1A6NKG5 1358 aa23.19■■□□□ 1.3
NECTIN1-202ENST00000340882 CGNL1Q0VF96 1302 aa23.19■■□□□ 1.3
NECTIN1-202ENST00000340882 RAPGEF4Q8WZA2 1011 aa23.19■■□□□ 1.3
NECTIN1-202ENST00000340882 PUS7Q96PZ0 661 aaKnown RBP23.19■■□□□ 1.3
NECTIN1-202ENST00000340882 CICQ96RK0 1608 aaPredicted RBP23.19■■□□□ 1.3
NECTIN1-202ENST00000340882 CYP27B1O15528 508 aa23.18■■□□□ 1.3
NECTIN1-202ENST00000340882 N4BP2Q86UW6 1770 aaPredicted RBP23.18■■□□□ 1.3
NECTIN1-202ENST00000340882 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.17■■□□□ 1.3
NECTIN1-202ENST00000340882 TATP17735 454 aaPredicted RBP23.17■■□□□ 1.3
NECTIN1-202ENST00000340882 AK7Q96M32 723 aa23.17■■□□□ 1.3
NECTIN1-202ENST00000340882 PCDH11XQ9BZA7 1347 aa23.16■■□□□ 1.3
NECTIN1-202ENST00000340882 PCDH11YQ9BZA8 1340 aa23.16■■□□□ 1.3
NECTIN1-202ENST00000340882 DNAJC5GQ8N7S2 189 aa23.16■■□□□ 1.3
NECTIN1-202ENST00000340882 KIF13BQ9NQT8 1826 aa23.15■■□□□ 1.3
NECTIN1-202ENST00000340882 HSP90AB2PQ58FF8 381 aa23.15■■□□□ 1.3
NECTIN1-202ENST00000340882 TESK2Q96S53 571 aa23.15■■□□□ 1.3
NECTIN1-202ENST00000340882 PKD1L3Q7Z443 1732 aa23.15■■□□□ 1.3
NECTIN1-202ENST00000340882 GGNBP2Q9H3C7 697 aa23.14■■□□□ 1.29
NECTIN1-202ENST00000340882 FYB1O15117 783 aa23.13■■□□□ 1.29
NECTIN1-202ENST00000340882 LINC00116Q8NCU8 138 aa23.13■■□□□ 1.29
NECTIN1-202ENST00000340882 PIGBQ92521 554 aa23.13■■□□□ 1.29
NECTIN1-202ENST00000340882 SMG6Q86US8 1419 aaKnown RBP23.11■■□□□ 1.29
NECTIN1-202ENST00000340882 APLP1P51693 650 aa23.11■■□□□ 1.29
NECTIN1-202ENST00000340882 SMARCC1Q92922 1105 aaPredicted RBP23.11■■□□□ 1.29
NECTIN1-202ENST00000340882 PXDNLA1KZ92 1463 aa23.11■■□□□ 1.29
NECTIN1-202ENST00000340882 SSFA2P28290 1259 aa23.1■■□□□ 1.29
NECTIN1-202ENST00000340882 INSRP06213 1382 aa23.1■■□□□ 1.29
NECTIN1-202ENST00000340882 KIF20BQ96Q89 1820 aa23.1■■□□□ 1.29
NECTIN1-202ENST00000340882 WDR90Q96KV7 1748 aa23.09■■□□□ 1.29
NECTIN1-202ENST00000340882 ST20-MTHFSA0A0A6YYL1 179 aa23.08■■□□□ 1.29
NECTIN1-202ENST00000340882 ITPK1Q13572 414 aa23.08■■□□□ 1.29
NECTIN1-202ENST00000340882 BRCA1P38398 1863 aaKnown RBP23.07■■□□□ 1.28
NECTIN1-202ENST00000340882 LOC102724428A0A0B4J2F2 783 aa23.07■■□□□ 1.28
NECTIN1-202ENST00000340882 TOMM70O94826 608 aa23.07■■□□□ 1.28
NECTIN1-202ENST00000340882 HMGB2P26583 209 aaKnown RBP23.07■■□□□ 1.28
NECTIN1-202ENST00000340882 SIK1P57059 783 aa23.07■■□□□ 1.28
NECTIN1-202ENST00000340882 NMRK2Q9NPI5 230 aa23.07■■□□□ 1.28
NECTIN1-202ENST00000340882 NSD3Q9BZ95 1437 aa23.07■■□□□ 1.28
NECTIN1-202ENST00000340882 MMP10P09238 476 aa23.06■■□□□ 1.28
NECTIN1-202ENST00000340882 GNPATO15228 680 aa23.05■■□□□ 1.28
NECTIN1-202ENST00000340882 NKX1-1Q15270 411 aaPredicted RBP23.05■■□□□ 1.28
NECTIN1-202ENST00000340882 ASAP1Q9ULH1 1129 aa23.05■■□□□ 1.28
NECTIN1-202ENST00000340882 FLT4P35916 1363 aa23.04■■□□□ 1.28
NECTIN1-202ENST00000340882 A0A0G2JLW4 131 aa23.04■■□□□ 1.28
NECTIN1-202ENST00000340882 HTRA3P83110 453 aa23.04■■□□□ 1.28
NECTIN1-202ENST00000340882 BCS1LQ9Y276 419 aa23.04■■□□□ 1.28
NECTIN1-202ENST00000340882 NCAPD2Q15021 1401 aa23.02■■□□□ 1.28
NECTIN1-202ENST00000340882 EMILIN1Q9Y6C2 1016 aa23.01■■□□□ 1.27
NECTIN1-202ENST00000340882 ATP6V1AP38606 617 aa23■■□□□ 1.27
NECTIN1-202ENST00000340882 COL13A1Q5TAT6 717 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms