RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 RBSNQ9H1K0 784 aa18.99■□□□□ 0.63
LIMK2-203ENST00000340552 MAP2P11137 1827 aaKnown RBP18.99■□□□□ 0.63
LIMK2-203ENST00000340552 PNPLA6Q8IY17 1366 aa18.99■□□□□ 0.63
LIMK2-203ENST00000340552 ZRANB1Q9UGI0 708 aa18.99■□□□□ 0.63
LIMK2-203ENST00000340552 POLKQ9UBT6 870 aa18.98■□□□□ 0.63
LIMK2-203ENST00000340552 PLEKHG3A1L390 1219 aa18.98■□□□□ 0.63
LIMK2-203ENST00000340552 DIAPH1O60610 1272 aaKnown RBP18.98■□□□□ 0.63
LIMK2-203ENST00000340552 CD2BP2O95400 341 aaKnown RBP18.98■□□□□ 0.63
LIMK2-203ENST00000340552 KCNA6P17658 529 aa18.98■□□□□ 0.63
LIMK2-203ENST00000340552 PIK3R4Q99570 1358 aa18.98■□□□□ 0.63
LIMK2-203ENST00000340552 ACEP12821 1306 aa18.98■□□□□ 0.63
LIMK2-203ENST00000340552 BCL2L13Q9BXK5 485 aa18.98■□□□□ 0.63
LIMK2-203ENST00000340552 COG3Q96JB2 828 aa18.97■□□□□ 0.63
LIMK2-203ENST00000340552 GOLGA6L22H0YM25 854 aa18.97■□□□□ 0.63
LIMK2-203ENST00000340552 JARID2Q92833 1246 aaPredicted RBP18.97■□□□□ 0.63
LIMK2-203ENST00000340552 BAG4O95429 457 aaKnown RBP18.96■□□□□ 0.63
LIMK2-203ENST00000340552 NCLP19338 710 aaKnown RBP18.95■□□□□ 0.62
LIMK2-203ENST00000340552 ZSCAN23Q3MJ62 389 aa18.95■□□□□ 0.62
LIMK2-203ENST00000340552 CLEC17AQ6ZS10 378 aa18.95■□□□□ 0.62
LIMK2-203ENST00000340552 PHF23Q9BUL5 403 aaPredicted RBP18.94■□□□□ 0.62
LIMK2-203ENST00000340552 CBX1P83916 185 aa18.94■□□□□ 0.62
LIMK2-203ENST00000340552 CAVIN1Q6NZI2 390 aaKnown RBP18.94■□□□□ 0.62
LIMK2-203ENST00000340552 KIF2CQ99661 725 aa18.94■□□□□ 0.62
LIMK2-203ENST00000340552 GTPBP4Q9BZE4 634 aaKnown RBP18.94■□□□□ 0.62
LIMK2-203ENST00000340552 TTC21BQ7Z4L5 1316 aa18.94■□□□□ 0.62
LIMK2-203ENST00000340552 MCM5P33992 734 aa18.93■□□□□ 0.62
LIMK2-203ENST00000340552 EMILIN1Q9Y6C2 1016 aa18.93■□□□□ 0.62
LIMK2-203ENST00000340552 KIF20AO95235 890 aa18.93■□□□□ 0.62
LIMK2-203ENST00000340552 CCDC27Q2M243 656 aa18.93■□□□□ 0.62
LIMK2-203ENST00000340552 PLEKHF1Q96S99 279 aa18.93■□□□□ 0.62
LIMK2-203ENST00000340552 AATKQ6ZMQ8 1374 aa18.93■□□□□ 0.62
LIMK2-203ENST00000340552 ZNF710Q8N1W2 664 aa18.93■□□□□ 0.62
LIMK2-203ENST00000340552 NRKQ7Z2Y5 1582 aa18.92■□□□□ 0.62
LIMK2-203ENST00000340552 RGPD8O14715 1765 aaPredicted RBP18.92■□□□□ 0.62
LIMK2-203ENST00000340552 USP6P35125 1406 aa18.92■□□□□ 0.62
LIMK2-203ENST00000340552 PRIM1P49642 420 aaKnown RBP18.92■□□□□ 0.62
LIMK2-203ENST00000340552 TSC1Q92574 1164 aa18.92■□□□□ 0.62
LIMK2-203ENST00000340552 CHD2O14647 1828 aaKnown RBP18.92■□□□□ 0.62
LIMK2-203ENST00000340552 NCBP3Q53F19 620 aaKnown RBP18.92■□□□□ 0.62
LIMK2-203ENST00000340552 GAS2L2Q8NHY3 880 aa18.92■□□□□ 0.62
LIMK2-203ENST00000340552 NAP1L2Q9ULW6 460 aaPredicted RBP18.92■□□□□ 0.62
LIMK2-203ENST00000340552 K7ELQ4 463 aaPredicted RBP18.91■□□□□ 0.62
LIMK2-203ENST00000340552 WDR63Q8IWG1 891 aa18.91■□□□□ 0.62
LIMK2-203ENST00000340552 MYRIPQ8NFW9 859 aa18.91■□□□□ 0.62
LIMK2-203ENST00000340552 MVPQ14764 893 aaKnown RBP18.9■□□□□ 0.62
LIMK2-203ENST00000340552 RRS1Q15050 365 aaKnown RBP18.89■□□□□ 0.62
LIMK2-203ENST00000340552 LETM1O95202 739 aaPredicted RBP18.89■□□□□ 0.61
LIMK2-203ENST00000340552 ATP2B3Q16720 1220 aa18.89■□□□□ 0.61
LIMK2-203ENST00000340552 MCTP1Q6DN14 999 aa18.89■□□□□ 0.61
LIMK2-203ENST00000340552 TMEM51Q9NW97 253 aa18.89■□□□□ 0.61
LIMK2-203ENST00000340552 CCDC39Q9UFE4 941 aa18.89■□□□□ 0.61
LIMK2-203ENST00000340552 CDK12Q9NYV4 1490 aaPredicted RBP18.89■□□□□ 0.61
LIMK2-203ENST00000340552 RBM42Q9BTD8 480 aaKnown RBP18.88■□□□□ 0.61
LIMK2-203ENST00000340552 CHMP4BQ9H444 224 aaKnown RBP18.88■□□□□ 0.61
LIMK2-203ENST00000340552 TMPOP42166 694 aaKnown RBP18.88■□□□□ 0.61
LIMK2-203ENST00000340552 NGDNQ8NEJ9 315 aaKnown RBP18.88■□□□□ 0.61
LIMK2-203ENST00000340552 ZBTB7CA1YPR0 619 aa18.87■□□□□ 0.61
LIMK2-203ENST00000340552 FCHSD2O94868 740 aa18.87■□□□□ 0.61
LIMK2-203ENST00000340552 PDIA4P13667 645 aaKnown RBP18.87■□□□□ 0.61
LIMK2-203ENST00000340552 LMBRD1Q9NUN5 540 aa18.87■□□□□ 0.61
LIMK2-203ENST00000340552 SSH2Q76I76 1423 aa18.87■□□□□ 0.61
LIMK2-203ENST00000340552 OVOS2A0A0J9YW53 1432 aa18.86■□□□□ 0.61
LIMK2-203ENST00000340552 NPHP4O75161 1426 aaPredicted RBP18.86■□□□□ 0.61
LIMK2-203ENST00000340552 OVOS2Q6IE36 1432 aa18.86■□□□□ 0.61
LIMK2-203ENST00000340552 ANKARQ7Z5J8 1434 aa18.86■□□□□ 0.61
LIMK2-203ENST00000340552 IL13P35225 146 aa18.85■□□□□ 0.61
LIMK2-203ENST00000340552 RBM27Q9P2N5 1060 aaKnown RBP18.85■□□□□ 0.61
LIMK2-203ENST00000340552 FMN2Q9NZ56 1722 aa18.85■□□□□ 0.61
LIMK2-203ENST00000340552 LRRC7Q96NW7 1537 aa18.85■□□□□ 0.61
LIMK2-203ENST00000340552 HDAC1Q13547 482 aaPredicted RBP18.85■□□□□ 0.61
LIMK2-203ENST00000340552 TTC21AQ8NDW8 1320 aa18.84■□□□□ 0.61
LIMK2-203ENST00000340552 PRKAR2BP31323 418 aa18.84■□□□□ 0.61
LIMK2-203ENST00000340552 RBM33Q96EV2 1170 aaKnown RBP18.83■□□□□ 0.61
LIMK2-203ENST00000340552 NALCNQ8IZF0 1738 aa18.83■□□□□ 0.61
LIMK2-203ENST00000340552 HMOX1P09601 288 aa18.83■□□□□ 0.6
LIMK2-203ENST00000340552 TRIM35Q9UPQ4 493 aa18.83■□□□□ 0.6
LIMK2-203ENST00000340552 KIAA2012Q0VF49 1180 aa18.82■□□□□ 0.6
LIMK2-203ENST00000340552 FAM177BA6PVY3 158 aa18.81■□□□□ 0.6
LIMK2-203ENST00000340552 FTSJ3Q8IY81 847 aaKnown RBP18.81■□□□□ 0.6
LIMK2-203ENST00000340552 GPT2Q8TD30 523 aa18.81■□□□□ 0.6
LIMK2-203ENST00000340552 DNTTIP2Q5QJE6 756 aaKnown RBP18.81■□□□□ 0.6
LIMK2-203ENST00000340552 DZIP1LQ8IYY4 767 aaKnown RBP18.81■□□□□ 0.6
LIMK2-203ENST00000340552 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.81■□□□□ 0.6
LIMK2-203ENST00000340552 USP31Q70CQ4 1352 aa18.81■□□□□ 0.6
LIMK2-203ENST00000340552 GTF2F1P35269 517 aaKnown RBP eCLIP18.8■□□□□ 0.6
LIMK2-203ENST00000340552 ZKSCAN2Q63HK3 967 aa18.8■□□□□ 0.6
LIMK2-203ENST00000340552 PKP1Q13835 747 aa18.79■□□□□ 0.6
LIMK2-203ENST00000340552 LRSAM1Q6UWE0 723 aa18.79■□□□□ 0.6
LIMK2-203ENST00000340552 PRIMPOLQ96LW4 560 aa18.79■□□□□ 0.6
LIMK2-203ENST00000340552 SPDYE4A6NLX3 237 aa18.79■□□□□ 0.6
LIMK2-203ENST00000340552 SOX12O15370 315 aa18.79■□□□□ 0.6
LIMK2-203ENST00000340552 SYCE3A1L190 88 aa18.78■□□□□ 0.6
LIMK2-203ENST00000340552 VGLL3A8MV65 326 aa18.78■□□□□ 0.6
LIMK2-203ENST00000340552 IGSF3O75054 1194 aa18.78■□□□□ 0.6
LIMK2-203ENST00000340552 CYP2E1P05181 493 aaPredicted RBP18.78■□□□□ 0.6
LIMK2-203ENST00000340552 IPO4Q8TEX9 1081 aaKnown RBP18.78■□□□□ 0.6
LIMK2-203ENST00000340552 LNPKQ9C0E8 428 aa18.78■□□□□ 0.6
LIMK2-203ENST00000340552 TMEM63CQ9P1W3 806 aa18.78■□□□□ 0.6
LIMK2-203ENST00000340552 KIF16BQ96L93 1317 aa18.78■□□□□ 0.6
LIMK2-203ENST00000340552 PRPF40AO75400 957 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms