RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 RIMBP3CA6NJZ7 1639 aa11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 RIMBP3BA6NNM3 1639 aa11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 RIMBP3Q9UFD9 1639 aa11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 ATP2B1P20020 1258 aa11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 TPD52L1Q16890 204 aaPredicted RBP11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 SYTL4Q96C24 671 aaPredicted RBP11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 BRMS1Q9HCU9 246 aa11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 KIF14Q15058 1648 aa11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 RAPGEF6Q8TEU7 1601 aa11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 MBD3O95983 291 aa11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 CTR9Q6PD62 1173 aa11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 FHOD1Q9Y613 1164 aa11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 USP27XA6NNY8 438 aa11.56□□□□□ -0.56
PTCHD4-201ENST00000339488 ZBTB12Q9Y330 459 aaPredicted RBP11.56□□□□□ -0.56
PTCHD4-201ENST00000339488 DISP3Q9P2K9 1392 aa11.56□□□□□ -0.56
PTCHD4-201ENST00000339488 CCDC189A1A4V9 331 aa11.56□□□□□ -0.56
PTCHD4-201ENST00000339488 BIRC2Q13490 618 aa11.56□□□□□ -0.56
PTCHD4-201ENST00000339488 SYCP1Q15431 976 aa11.56□□□□□ -0.56
PTCHD4-201ENST00000339488 FOXR1Q6PIV2 292 aa11.56□□□□□ -0.56
PTCHD4-201ENST00000339488 CCDC186Q7Z3E2 898 aa11.56□□□□□ -0.56
PTCHD4-201ENST00000339488 ITPRIPQ8IWB1 547 aa11.56□□□□□ -0.56
PTCHD4-201ENST00000339488 CFAP44Q96MT7 982 aa11.56□□□□□ -0.56
PTCHD4-201ENST00000339488 ABCA8O94911 1581 aa11.55□□□□□ -0.56
PTCHD4-201ENST00000339488 A0A1B0GUL7 405 aa11.55□□□□□ -0.56
PTCHD4-201ENST00000339488 HSP90AB3PQ58FF7 597 aa11.55□□□□□ -0.56
PTCHD4-201ENST00000339488 DEF6Q9H4E7 631 aa11.55□□□□□ -0.56
PTCHD4-201ENST00000339488 GCC2Q8IWJ2 1684 aa11.55□□□□□ -0.56
PTCHD4-201ENST00000339488 EPRSP07814 1512 aaKnown RBP11.55□□□□□ -0.56
PTCHD4-201ENST00000339488 MVPQ14764 893 aaKnown RBP11.55□□□□□ -0.56
PTCHD4-201ENST00000339488 MUM1L1Q5H9M0 696 aa11.55□□□□□ -0.56
PTCHD4-201ENST00000339488 GIMAP6Q6P9H5 292 aa11.55□□□□□ -0.56
PTCHD4-201ENST00000339488 PTPRCP08575 1304 aa11.55□□□□□ -0.56
PTCHD4-201ENST00000339488 SEC31AO94979 1220 aaKnown RBP11.54□□□□□ -0.56
PTCHD4-201ENST00000339488 PNMA6AP0CW24 399 aaPredicted RBP11.54□□□□□ -0.56
PTCHD4-201ENST00000339488 ERCC6LQ2NKX8 1250 aa11.54□□□□□ -0.56
PTCHD4-201ENST00000339488 TXLNBQ8N3L3 684 aa11.54□□□□□ -0.56
PTCHD4-201ENST00000339488 DTNBO60941 627 aa11.54□□□□□ -0.56
PTCHD4-201ENST00000339488 MAP2K1Q02750 393 aaPredicted RBP11.54□□□□□ -0.56
PTCHD4-201ENST00000339488 CEP135Q66GS9 1140 aa11.54□□□□□ -0.56
PTCHD4-201ENST00000339488 DRC7Q8IY82 874 aa11.54□□□□□ -0.56
PTCHD4-201ENST00000339488 CLCN6P51797 869 aa11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 GOLGA6L1Q8N7Z2 621 aa11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 CCDC34Q96HJ3 373 aa11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 INSRP06213 1382 aa11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 LMAN1P49257 510 aa11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 USP26Q9BXU7 913 aa11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 ANKRD36BQ8N2N9 1353 aa11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 SCP2P22307 547 aa11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 OS9Q13438 667 aaPredicted RBP11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 PKD2Q13563 968 aa11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 TRMT1Q9NXH9 659 aaKnown RBP11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 MAGI3Q5TCQ9 1506 aa11.52□□□□□ -0.56
PTCHD4-201ENST00000339488 CYB5RLQ6IPT4 315 aa11.52□□□□□ -0.57
PTCHD4-201ENST00000339488 USP48Q86UV5 1035 aa11.52□□□□□ -0.57
PTCHD4-201ENST00000339488 SYAP1Q96A49 352 aaPredicted RBP11.52□□□□□ -0.57
PTCHD4-201ENST00000339488 PLEKHA4Q9H4M7 779 aa11.52□□□□□ -0.57
PTCHD4-201ENST00000339488 ADCY10Q96PN6 1610 aa11.52□□□□□ -0.57
PTCHD4-201ENST00000339488 RALGAPBQ86X10 1494 aa11.52□□□□□ -0.57
PTCHD4-201ENST00000339488 ARID5BQ14865 1188 aa11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 SKIDA1Q1XH10 827 aa11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 UVSSAQ2YD98 709 aa11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 TEX35Q5T0J7 233 aa11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 LRCH2Q5VUJ6 765 aa11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 TTC19Q6DKK2 380 aaPredicted RBP11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 CWC27Q6UX04 472 aaKnown RBP11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 SLC24A3Q9HC58 644 aa11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 ECM2O94769 699 aaPredicted RBP11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 OAS2P29728 719 aaKnown RBP11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 ANKRD45Q5TZF3 282 aa11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 CCDC144AA2RUR9 1427 aa11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 PLEKHG2Q9H7P9 1386 aa11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 MAP2K2P36507 400 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 CCDC91Q7Z6B0 441 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 FAM184AQ8NB25 1140 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 PLCD4Q9BRC7 762 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 ABCC2Q92887 1545 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 ZNF853P0CG23 659 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 GORABQ5T7V8 394 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 RPAINQ86UA6 219 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 EPC1Q9H2F5 836 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 C1orf115Q9H7X2 142 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 PDRG1Q9NUG6 133 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 DZIP1LQ8IYY4 767 aaKnown RBP11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 PAXBP1Q9Y5B6 917 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 RABEP1Q15276 862 aa11.49□□□□□ -0.57
PTCHD4-201ENST00000339488 CHD1LQ86WJ1 897 aa11.49□□□□□ -0.57
PTCHD4-201ENST00000339488 TICAM2Q86XR7 235 aa11.49□□□□□ -0.57
PTCHD4-201ENST00000339488 ANKRD20A12PQ8NF67 263 aa11.49□□□□□ -0.57
PTCHD4-201ENST00000339488 CREBRFQ8IUR6 639 aa11.49□□□□□ -0.57
PTCHD4-201ENST00000339488 ANKRD30AQ9BXX3 1397 aa11.49□□□□□ -0.57
PTCHD4-201ENST00000339488 ATP10BO94823 1461 aa11.49□□□□□ -0.57
PTCHD4-201ENST00000339488 EIF3CLB5ME19 914 aaKnown RBP11.48□□□□□ -0.57
PTCHD4-201ENST00000339488 PDE6BP35913 854 aa11.48□□□□□ -0.57
PTCHD4-201ENST00000339488 NBPF20Q3BBV1 942 aa11.48□□□□□ -0.57
PTCHD4-201ENST00000339488 EIF3CQ99613 913 aaKnown RBP11.48□□□□□ -0.57
PTCHD4-201ENST00000339488 CHMP3Q9Y3E7 222 aa11.48□□□□□ -0.57
PTCHD4-201ENST00000339488 ATP6V1AP38606 617 aa11.48□□□□□ -0.57
PTCHD4-201ENST00000339488 NUCB1Q02818 461 aa11.48□□□□□ -0.57
PTCHD4-201ENST00000339488 BMP2KLQ5H9B9 411 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms