RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 RIMBP3CA6NJZ7 1639 aa11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 RIMBP3BA6NNM3 1639 aa11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 RIMBP3Q9UFD9 1639 aa11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 ATP2B1P20020 1258 aa11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 TPD52L1Q16890 204 aaPredicted RBP11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 SYTL4Q96C24 671 aaPredicted RBP11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 BRMS1Q9HCU9 246 aa11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 KIF14Q15058 1648 aa11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 RAPGEF6Q8TEU7 1601 aa11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 MBD3O95983 291 aa11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 CTR9Q6PD62 1173 aa11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 FHOD1Q9Y613 1164 aa11.57□□□□□ -0.56
PTCHD4-201ENST00000339488 USP27XA6NNY8 438 aa11.56□□□□□ -0.56
PTCHD4-201ENST00000339488 ZBTB12Q9Y330 459 aaPredicted RBP11.56□□□□□ -0.56
PTCHD4-201ENST00000339488 DISP3Q9P2K9 1392 aa11.56□□□□□ -0.56
PTCHD4-201ENST00000339488 CCDC189A1A4V9 331 aa11.56□□□□□ -0.56
PTCHD4-201ENST00000339488 BIRC2Q13490 618 aa11.56□□□□□ -0.56
PTCHD4-201ENST00000339488 SYCP1Q15431 976 aa11.56□□□□□ -0.56
PTCHD4-201ENST00000339488 FOXR1Q6PIV2 292 aa11.56□□□□□ -0.56
PTCHD4-201ENST00000339488 CCDC186Q7Z3E2 898 aa11.56□□□□□ -0.56
PTCHD4-201ENST00000339488 ITPRIPQ8IWB1 547 aa11.56□□□□□ -0.56
PTCHD4-201ENST00000339488 CFAP44Q96MT7 982 aa11.56□□□□□ -0.56
PTCHD4-201ENST00000339488 ABCA8O94911 1581 aa11.55□□□□□ -0.56
PTCHD4-201ENST00000339488 A0A1B0GUL7 405 aa11.55□□□□□ -0.56
PTCHD4-201ENST00000339488 HSP90AB3PQ58FF7 597 aa11.55□□□□□ -0.56
PTCHD4-201ENST00000339488 DEF6Q9H4E7 631 aa11.55□□□□□ -0.56
PTCHD4-201ENST00000339488 GCC2Q8IWJ2 1684 aa11.55□□□□□ -0.56
PTCHD4-201ENST00000339488 EPRSP07814 1512 aaKnown RBP11.55□□□□□ -0.56
PTCHD4-201ENST00000339488 MVPQ14764 893 aaKnown RBP11.55□□□□□ -0.56
PTCHD4-201ENST00000339488 MUM1L1Q5H9M0 696 aa11.55□□□□□ -0.56
PTCHD4-201ENST00000339488 GIMAP6Q6P9H5 292 aa11.55□□□□□ -0.56
PTCHD4-201ENST00000339488 PTPRCP08575 1304 aa11.55□□□□□ -0.56
PTCHD4-201ENST00000339488 SEC31AO94979 1220 aaKnown RBP11.54□□□□□ -0.56
PTCHD4-201ENST00000339488 PNMA6AP0CW24 399 aaPredicted RBP11.54□□□□□ -0.56
PTCHD4-201ENST00000339488 ERCC6LQ2NKX8 1250 aa11.54□□□□□ -0.56
PTCHD4-201ENST00000339488 TXLNBQ8N3L3 684 aa11.54□□□□□ -0.56
PTCHD4-201ENST00000339488 DTNBO60941 627 aa11.54□□□□□ -0.56
PTCHD4-201ENST00000339488 MAP2K1Q02750 393 aaPredicted RBP11.54□□□□□ -0.56
PTCHD4-201ENST00000339488 CEP135Q66GS9 1140 aa11.54□□□□□ -0.56
PTCHD4-201ENST00000339488 DRC7Q8IY82 874 aa11.54□□□□□ -0.56
PTCHD4-201ENST00000339488 CLCN6P51797 869 aa11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 GOLGA6L1Q8N7Z2 621 aa11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 CCDC34Q96HJ3 373 aa11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 INSRP06213 1382 aa11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 LMAN1P49257 510 aa11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 USP26Q9BXU7 913 aa11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 ANKRD36BQ8N2N9 1353 aa11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 SCP2P22307 547 aa11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 OS9Q13438 667 aaPredicted RBP11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 PKD2Q13563 968 aa11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 TRMT1Q9NXH9 659 aaKnown RBP11.53□□□□□ -0.56
PTCHD4-201ENST00000339488 MAGI3Q5TCQ9 1506 aa11.52□□□□□ -0.56
PTCHD4-201ENST00000339488 CYB5RLQ6IPT4 315 aa11.52□□□□□ -0.57
PTCHD4-201ENST00000339488 USP48Q86UV5 1035 aa11.52□□□□□ -0.57
PTCHD4-201ENST00000339488 SYAP1Q96A49 352 aaPredicted RBP11.52□□□□□ -0.57
PTCHD4-201ENST00000339488 PLEKHA4Q9H4M7 779 aa11.52□□□□□ -0.57
PTCHD4-201ENST00000339488 ADCY10Q96PN6 1610 aa11.52□□□□□ -0.57
PTCHD4-201ENST00000339488 RALGAPBQ86X10 1494 aa11.52□□□□□ -0.57
PTCHD4-201ENST00000339488 ARID5BQ14865 1188 aa11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 SKIDA1Q1XH10 827 aa11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 UVSSAQ2YD98 709 aa11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 TEX35Q5T0J7 233 aa11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 LRCH2Q5VUJ6 765 aa11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 TTC19Q6DKK2 380 aaPredicted RBP11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 CWC27Q6UX04 472 aaKnown RBP11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 SLC24A3Q9HC58 644 aa11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 ECM2O94769 699 aaPredicted RBP11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 OAS2P29728 719 aaKnown RBP11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 ANKRD45Q5TZF3 282 aa11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 CCDC144AA2RUR9 1427 aa11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 PLEKHG2Q9H7P9 1386 aa11.51□□□□□ -0.57
PTCHD4-201ENST00000339488 MAP2K2P36507 400 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 CCDC91Q7Z6B0 441 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 FAM184AQ8NB25 1140 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 PLCD4Q9BRC7 762 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 ABCC2Q92887 1545 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 ZNF853P0CG23 659 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 GORABQ5T7V8 394 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 RPAINQ86UA6 219 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 EPC1Q9H2F5 836 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 C1orf115Q9H7X2 142 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 PDRG1Q9NUG6 133 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 DZIP1LQ8IYY4 767 aaKnown RBP11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 PAXBP1Q9Y5B6 917 aa11.5□□□□□ -0.57
PTCHD4-201ENST00000339488 RABEP1Q15276 862 aa11.49□□□□□ -0.57
PTCHD4-201ENST00000339488 CHD1LQ86WJ1 897 aa11.49□□□□□ -0.57
PTCHD4-201ENST00000339488 TICAM2Q86XR7 235 aa11.49□□□□□ -0.57
PTCHD4-201ENST00000339488 ANKRD20A12PQ8NF67 263 aa11.49□□□□□ -0.57
PTCHD4-201ENST00000339488 CREBRFQ8IUR6 639 aa11.49□□□□□ -0.57
PTCHD4-201ENST00000339488 ANKRD30AQ9BXX3 1397 aa11.49□□□□□ -0.57
PTCHD4-201ENST00000339488 ATP10BO94823 1461 aa11.49□□□□□ -0.57
PTCHD4-201ENST00000339488 EIF3CLB5ME19 914 aaKnown RBP11.48□□□□□ -0.57
PTCHD4-201ENST00000339488 PDE6BP35913 854 aa11.48□□□□□ -0.57
PTCHD4-201ENST00000339488 NBPF20Q3BBV1 942 aa11.48□□□□□ -0.57
PTCHD4-201ENST00000339488 EIF3CQ99613 913 aaKnown RBP11.48□□□□□ -0.57
PTCHD4-201ENST00000339488 CHMP3Q9Y3E7 222 aa11.48□□□□□ -0.57
PTCHD4-201ENST00000339488 ATP6V1AP38606 617 aa11.48□□□□□ -0.57
PTCHD4-201ENST00000339488 NUCB1Q02818 461 aa11.48□□□□□ -0.57
PTCHD4-201ENST00000339488 BMP2KLQ5H9B9 411 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms