RNA–Protein interactions for RNA: ENST00000339485.3

VMAC-201, Transcript of vimentin type intermediate filament associated coiled-coil protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMAC, Length 2,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMAC-201ENST00000339485 DLG5Q8TDM6 1919 aa23.53■■□□□ 1.36
VMAC-201ENST00000339485 TRIM35Q9UPQ4 493 aa23.53■■□□□ 1.36
VMAC-201ENST00000339485 ARHGEF10O15013 1369 aa23.53■■□□□ 1.36
VMAC-201ENST00000339485 WDR63Q8IWG1 891 aa23.53■■□□□ 1.36
VMAC-201ENST00000339485 UPF2Q9HAU5 1272 aaKnown RBP23.53■■□□□ 1.36
VMAC-201ENST00000339485 LTV1Q96GA3 475 aaPredicted RBP23.52■■□□□ 1.36
VMAC-201ENST00000339485 TBC1D2Q9BYX2 928 aa23.52■■□□□ 1.36
VMAC-201ENST00000339485 LTBP4Q8N2S1 1624 aa23.51■■□□□ 1.35
VMAC-201ENST00000339485 EYA1Q99502 592 aa23.51■■□□□ 1.35
VMAC-201ENST00000339485 PDZRN3Q9UPQ7 1066 aa23.51■■□□□ 1.35
VMAC-201ENST00000339485 TNNQ9UQP3 1299 aa23.51■■□□□ 1.35
VMAC-201ENST00000339485 NFE2L2Q16236 605 aa23.5■■□□□ 1.35
VMAC-201ENST00000339485 IP6K1Q92551 441 aa23.5■■□□□ 1.35
VMAC-201ENST00000339485 SPATA31A3Q5VYP0 1347 aa23.5■■□□□ 1.35
VMAC-201ENST00000339485 IGSF1Q8N6C5 1336 aa23.5■■□□□ 1.35
VMAC-201ENST00000339485 ARHGEF25Q86VW2 580 aa23.49■■□□□ 1.35
VMAC-201ENST00000339485 L1TD1Q5T7N2 865 aaKnown RBP23.49■■□□□ 1.35
VMAC-201ENST00000339485 CRYBG1Q9Y4K1 1723 aa23.48■■□□□ 1.35
VMAC-201ENST00000339485 KDRP35968 1356 aa23.47■■□□□ 1.35
VMAC-201ENST00000339485 EIF5BO60841 1220 aaKnown RBP23.47■■□□□ 1.35
VMAC-201ENST00000339485 NHSL1Q5SYE7 1610 aa23.47■■□□□ 1.35
VMAC-201ENST00000339485 CABLES1Q8TDN4 633 aa23.47■■□□□ 1.35
VMAC-201ENST00000339485 RGPD2P0DJD1 1756 aa23.46■■□□□ 1.35
VMAC-201ENST00000339485 RGPD5Q99666 1765 aa23.46■■□□□ 1.35
VMAC-201ENST00000339485 ZC3H6P61129 1189 aaKnown RBP23.45■■□□□ 1.35
VMAC-201ENST00000339485 BCL2L13Q9BXK5 485 aa23.45■■□□□ 1.35
VMAC-201ENST00000339485 RWDD1Q9H446 243 aaPredicted RBP23.45■■□□□ 1.35
VMAC-201ENST00000339485 SOS2Q07890 1332 aaPredicted RBP23.45■■□□□ 1.35
VMAC-201ENST00000339485 MYH16Q9H6N6 1097 aa23.42■■□□□ 1.34
VMAC-201ENST00000339485 RRAGDQ9NQL2 400 aaPredicted RBP23.42■■□□□ 1.34
VMAC-201ENST00000339485 USHBP1Q8N6Y0 703 aa23.42■■□□□ 1.34
VMAC-201ENST00000339485 UBE2Q2Q8WVN8 375 aa23.42■■□□□ 1.34
VMAC-201ENST00000339485 THUMPD2Q9BTF0 503 aaKnown RBP23.41■■□□□ 1.34
VMAC-201ENST00000339485 ROBO1Q9Y6N7 1651 aa23.41■■□□□ 1.34
VMAC-201ENST00000339485 MVPQ14764 893 aaKnown RBP23.4■■□□□ 1.34
VMAC-201ENST00000339485 TSR2Q969E8 191 aaKnown RBP23.4■■□□□ 1.34
VMAC-201ENST00000339485 IL16Q14005 1332 aa23.4■■□□□ 1.34
VMAC-201ENST00000339485 AXIN2Q9Y2T1 843 aa23.4■■□□□ 1.34
VMAC-201ENST00000339485 NBPF6Q5VWK0 638 aa23.39■■□□□ 1.33
VMAC-201ENST00000339485 NBPF4Q96M43 638 aa23.39■■□□□ 1.33
VMAC-201ENST00000339485 FSD2A1L4K1 749 aa23.38■■□□□ 1.33
VMAC-201ENST00000339485 FAM83GA6ND36 823 aa23.38■■□□□ 1.33
VMAC-201ENST00000339485 LMOD3Q0VAK6 560 aa23.38■■□□□ 1.33
VMAC-201ENST00000339485 LRRC59Q96AG4 307 aaKnown RBP23.38■■□□□ 1.33
VMAC-201ENST00000339485 MCM4P33991 863 aa23.38■■□□□ 1.33
VMAC-201ENST00000339485 COL18A1P39060 1754 aa23.37■■□□□ 1.33
VMAC-201ENST00000339485 ANKRD24Q8TF21 1146 aa23.37■■□□□ 1.33
VMAC-201ENST00000339485 ABCA3Q99758 1704 aa23.37■■□□□ 1.33
VMAC-201ENST00000339485 DCTN1Q14203 1278 aa23.36■■□□□ 1.33
VMAC-201ENST00000339485 XRCC6P12956 609 aaKnown RBP eCLIP23.36■■□□□ 1.33
VMAC-201ENST00000339485 MTHFSDQ2M296 383 aaKnown RBP23.36■■□□□ 1.33
VMAC-201ENST00000339485 AEBP2Q6ZN18 517 aaPredicted RBP23.35■■□□□ 1.33
VMAC-201ENST00000339485 C22orf23Q9BZE7 217 aa23.35■■□□□ 1.33
VMAC-201ENST00000339485 KIAA0232Q92628 1395 aa23.34■■□□□ 1.33
VMAC-201ENST00000339485 GOLGA6L3A6NEY3 463 aa23.34■■□□□ 1.33
VMAC-201ENST00000339485 ZKSCAN2Q63HK3 967 aa23.34■■□□□ 1.33
VMAC-201ENST00000339485 CHRNA2Q15822 529 aa23.34■■□□□ 1.33
VMAC-201ENST00000339485 SPRYD3Q8NCJ5 442 aa23.34■■□□□ 1.33
VMAC-201ENST00000339485 ERBB3P21860 1342 aa23.34■■□□□ 1.33
VMAC-201ENST00000339485 CALD1Q05682 793 aaKnown RBP23.33■■□□□ 1.33
VMAC-201ENST00000339485 DZIP1LQ8IYY4 767 aaKnown RBP23.33■■□□□ 1.33
VMAC-201ENST00000339485 CAMTA1Q9Y6Y1 1673 aa23.33■■□□□ 1.33
VMAC-201ENST00000339485 CHMP5Q9NZZ3 219 aa23.32■■□□□ 1.32
VMAC-201ENST00000339485 EXOSC9Q06265 439 aaKnown RBP23.31■■□□□ 1.32
VMAC-201ENST00000339485 FTSJ3Q8IY81 847 aaKnown RBP23.31■■□□□ 1.32
VMAC-201ENST00000339485 GAS2L2Q8NHY3 880 aa23.31■■□□□ 1.32
VMAC-201ENST00000339485 CPDO75976 1380 aa23.31■■□□□ 1.32
VMAC-201ENST00000339485 MCM10Q7L590 875 aa23.31■■□□□ 1.32
VMAC-201ENST00000339485 ABCC6O95255 1503 aa23.31■■□□□ 1.32
VMAC-201ENST00000339485 NCAPD2Q15021 1401 aa23.3■■□□□ 1.32
VMAC-201ENST00000339485 CT47B1P0C2W7 299 aaPredicted RBP23.3■■□□□ 1.32
VMAC-201ENST00000339485 HAP1P54257 671 aaPredicted RBP23.3■■□□□ 1.32
VMAC-201ENST00000339485 MFAP1P55081 439 aaKnown RBP23.3■■□□□ 1.32
VMAC-201ENST00000339485 HDAC1Q13547 482 aaPredicted RBP23.3■■□□□ 1.32
VMAC-201ENST00000339485 IFT57Q9NWB7 429 aa23.3■■□□□ 1.32
VMAC-201ENST00000339485 AHDC1Q5TGY3 1603 aaPredicted RBP23.3■■□□□ 1.32
VMAC-201ENST00000339485 GNAI1P63096 354 aa23.29■■□□□ 1.32
VMAC-201ENST00000339485 LMO7Q8WWI1 1683 aa23.28■■□□□ 1.32
VMAC-201ENST00000339485 ARXQ96QS3 562 aa23.28■■□□□ 1.32
VMAC-201ENST00000339485 PANK2Q9BZ23 570 aa23.28■■□□□ 1.32
VMAC-201ENST00000339485 GZF1Q9H116 711 aaPredicted RBP23.28■■□□□ 1.32
VMAC-201ENST00000339485 TRAK2O60296 914 aa23.27■■□□□ 1.32
VMAC-201ENST00000339485 ZNF853P0CG23 659 aa23.27■■□□□ 1.32
VMAC-201ENST00000339485 TRIM27P14373 513 aa23.26■■□□□ 1.31
VMAC-201ENST00000339485 RTF1Q92541 710 aaKnown RBP23.26■■□□□ 1.31
VMAC-201ENST00000339485 CFAP44Q96MT7 982 aa23.26■■□□□ 1.31
VMAC-201ENST00000339485 PRDM11Q9NQV5 511 aa23.26■■□□□ 1.31
VMAC-201ENST00000339485 FAM208AQ9UK61 1670 aaKnown RBP23.26■■□□□ 1.31
VMAC-201ENST00000339485 MBIPQ9NS73 344 aa23.26■■□□□ 1.31
VMAC-201ENST00000339485 SMC4Q9NTJ3 1288 aa23.25■■□□□ 1.31
VMAC-201ENST00000339485 CSB-PGBD3P0DP91 1061 aa23.24■■□□□ 1.31
VMAC-201ENST00000339485 NLRP2Q9NX02 1062 aa23.24■■□□□ 1.31
VMAC-201ENST00000339485 DDX19BQ9UMR2 479 aa23.24■■□□□ 1.31
VMAC-201ENST00000339485 SMC5Q8IY18 1101 aa23.24■■□□□ 1.31
VMAC-201ENST00000339485 MAP3K5Q99683 1374 aa23.23■■□□□ 1.31
VMAC-201ENST00000339485 LRRC37A3O60309 1634 aa23.23■■□□□ 1.31
VMAC-201ENST00000339485 GNAT3A8MTJ3 354 aa23.23■■□□□ 1.31
VMAC-201ENST00000339485 CRB1P82279 1406 aa23.23■■□□□ 1.31
VMAC-201ENST00000339485 PHLPP1O60346 1717 aa23.22■■□□□ 1.31
VMAC-201ENST00000339485 DDIT3P35638 169 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms