RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 LRRC59Q96AG4 307 aaKnown RBP21.95■■□□□ 1.1
ATAD3A-201ENST00000339113 TWISTNBQ3B726 338 aaPredicted RBP21.95■■□□□ 1.1
ATAD3A-201ENST00000339113 ATF7IPQ6VMQ6 1270 aa21.95■■□□□ 1.1
ATAD3A-201ENST00000339113 GAS2L2Q8NHY3 880 aa21.95■■□□□ 1.1
ATAD3A-201ENST00000339113 TCERG1O14776 1098 aaKnown RBP21.94■■□□□ 1.1
ATAD3A-201ENST00000339113 KRT24Q2M2I5 525 aa21.94■■□□□ 1.1
ATAD3A-201ENST00000339113 CENPQQ7L2Z9 268 aaPredicted RBP21.94■■□□□ 1.1
ATAD3A-201ENST00000339113 AXIN2Q9Y2T1 843 aa21.94■■□□□ 1.1
ATAD3A-201ENST00000339113 ZNF428Q96B54 188 aa21.94■■□□□ 1.1
ATAD3A-201ENST00000339113 MIS18AQ9NYP9 233 aa21.94■■□□□ 1.1
ATAD3A-201ENST00000339113 IGHDP01880 384 aa21.93■■□□□ 1.1
ATAD3A-201ENST00000339113 MVPQ14764 893 aaKnown RBP21.92■■□□□ 1.1
ATAD3A-201ENST00000339113 FTSJ3Q8IY81 847 aaKnown RBP21.92■■□□□ 1.1
ATAD3A-201ENST00000339113 RTF1Q92541 710 aaKnown RBP21.92■■□□□ 1.1
ATAD3A-201ENST00000339113 ALS2Q96Q42 1657 aa21.92■■□□□ 1.1
ATAD3A-201ENST00000339113 ZC3H6P61129 1189 aaKnown RBP21.92■■□□□ 1.1
ATAD3A-201ENST00000339113 MRPL50Q8N5N7 158 aaKnown RBP21.92■■□□□ 1.1
ATAD3A-201ENST00000339113 IPO9Q96P70 1041 aaKnown RBP21.92■■□□□ 1.1
ATAD3A-201ENST00000339113 NPHP3Q7Z494 1330 aa21.92■■□□□ 1.1
ATAD3A-201ENST00000339113 PHRF1Q9P1Y6 1649 aaKnown RBP21.91■■□□□ 1.1
ATAD3A-201ENST00000339113 DEKP35659 375 aaKnown RBP21.91■■□□□ 1.1
ATAD3A-201ENST00000339113 MED1Q15648 1581 aaPredicted RBP21.91■■□□□ 1.1
ATAD3A-201ENST00000339113 ANP32AP39687 249 aaKnown RBP21.91■■□□□ 1.1
ATAD3A-201ENST00000339113 BRPF1P55201 1214 aaPredicted RBP21.91■■□□□ 1.1
ATAD3A-201ENST00000339113 KIF16BQ96L93 1317 aa21.9■■□□□ 1.1
ATAD3A-201ENST00000339113 BRINP3Q76B58 766 aa21.9■■□□□ 1.1
ATAD3A-201ENST00000339113 CABLES1Q8TDN4 633 aa21.9■■□□□ 1.1
ATAD3A-201ENST00000339113 PCDHB15Q9Y5E8 787 aa21.9■■□□□ 1.1
ATAD3A-201ENST00000339113 GNAT3A8MTJ3 354 aa21.89■■□□□ 1.1
ATAD3A-201ENST00000339113 ANKRD24Q8TF21 1146 aa21.89■■□□□ 1.09
ATAD3A-201ENST00000339113 IPO8O15397 1037 aaKnown RBP21.88■■□□□ 1.09
ATAD3A-201ENST00000339113 MS4A1P11836 297 aa21.88■■□□□ 1.09
ATAD3A-201ENST00000339113 TMEM57Q8N5G2 664 aa21.88■■□□□ 1.09
ATAD3A-201ENST00000339113 IL17REQ8NFR9 667 aa21.88■■□□□ 1.09
ATAD3A-201ENST00000339113 RGPD2P0DJD1 1756 aa21.87■■□□□ 1.09
ATAD3A-201ENST00000339113 PXDNQ92626 1479 aa21.87■■□□□ 1.09
ATAD3A-201ENST00000339113 HTATSF1O43719 755 aaKnown RBP21.87■■□□□ 1.09
ATAD3A-201ENST00000339113 ITPRIPQ8IWB1 547 aa21.86■■□□□ 1.09
ATAD3A-201ENST00000339113 SLAIN2Q9P270 581 aa21.86■■□□□ 1.09
ATAD3A-201ENST00000339113 SPATA31A3Q5VYP0 1347 aa21.86■■□□□ 1.09
ATAD3A-201ENST00000339113 MAP3K5Q99683 1374 aa21.85■■□□□ 1.09
ATAD3A-201ENST00000339113 TNS3Q68CZ2 1445 aa21.85■■□□□ 1.09
ATAD3A-201ENST00000339113 AAMPQ13685 434 aa21.85■■□□□ 1.09
ATAD3A-201ENST00000339113 TSPYL4Q9UJ04 414 aa21.85■■□□□ 1.09
ATAD3A-201ENST00000339113 KIAA0232Q92628 1395 aa21.84■■□□□ 1.09
ATAD3A-201ENST00000339113 ARHGAP45Q92619 1136 aa21.82■■□□□ 1.08
ATAD3A-201ENST00000339113 DDX19BQ9UMR2 479 aa21.82■■□□□ 1.08
ATAD3A-201ENST00000339113 ERBB3P21860 1342 aa21.81■■□□□ 1.08
ATAD3A-201ENST00000339113 NCAPD2Q15021 1401 aa21.81■■□□□ 1.08
ATAD3A-201ENST00000339113 ZBTB47Q9UFB7 747 aaPredicted RBP21.8■■□□□ 1.08
ATAD3A-201ENST00000339113 LGR6Q9HBX8 967 aa21.8■■□□□ 1.08
ATAD3A-201ENST00000339113 RGPD5Q99666 1765 aa21.8■■□□□ 1.08
ATAD3A-201ENST00000339113 CHRNA2Q15822 529 aa21.79■■□□□ 1.08
ATAD3A-201ENST00000339113 LRRC37A3O60309 1634 aa21.79■■□□□ 1.08
ATAD3A-201ENST00000339113 ZBTB40Q9NUA8 1239 aa21.78■■□□□ 1.08
ATAD3A-201ENST00000339113 TAF7Q15545 349 aaPredicted RBP21.78■■□□□ 1.08
ATAD3A-201ENST00000339113 PLEKHO1Q53GL0 409 aaPredicted RBP21.77■■□□□ 1.07
ATAD3A-201ENST00000339113 ZNF530Q6P9A1 599 aaPredicted RBP21.77■■□□□ 1.07
ATAD3A-201ENST00000339113 SOS2Q07890 1332 aaPredicted RBP21.76■■□□□ 1.07
ATAD3A-201ENST00000339113 CEMIPQ8WUJ3 1361 aa21.76■■□□□ 1.07
ATAD3A-201ENST00000339113 ABCC4O15439 1325 aa21.76■■□□□ 1.07
ATAD3A-201ENST00000339113 RGS3P49796 1198 aa21.75■■□□□ 1.07
ATAD3A-201ENST00000339113 PDE4AP27815 886 aa21.75■■□□□ 1.07
ATAD3A-201ENST00000339113 HAP1P54257 671 aaPredicted RBP21.74■■□□□ 1.07
ATAD3A-201ENST00000339113 NLRP2Q9NX02 1062 aa21.74■■□□□ 1.07
ATAD3A-201ENST00000339113 COL18A1P39060 1754 aa21.74■■□□□ 1.07
ATAD3A-201ENST00000339113 ZBTB7BO15156 539 aaPredicted RBP21.74■■□□□ 1.07
ATAD3A-201ENST00000339113 NBR1Q14596 966 aa21.74■■□□□ 1.07
ATAD3A-201ENST00000339113 AMOTQ4VCS5 1084 aa21.74■■□□□ 1.07
ATAD3A-201ENST00000339113 AKAP4Q5JQC9 854 aa21.74■■□□□ 1.07
ATAD3A-201ENST00000339113 MPRIPQ6WCQ1 1025 aa21.74■■□□□ 1.07
ATAD3A-201ENST00000339113 RWDD1Q9H446 243 aaPredicted RBP21.74■■□□□ 1.07
ATAD3A-201ENST00000339113 CAMTA1Q9Y6Y1 1673 aa21.74■■□□□ 1.07
ATAD3A-201ENST00000339113 API5Q9BZZ5 524 aaKnown RBP21.73■■□□□ 1.07
ATAD3A-201ENST00000339113 CRYBG1Q9Y4K1 1723 aa21.73■■□□□ 1.07
ATAD3A-201ENST00000339113 SLC4A2P04920 1241 aa21.73■■□□□ 1.07
ATAD3A-201ENST00000339113 BACH2Q9BYV9 841 aa21.72■■□□□ 1.07
ATAD3A-201ENST00000339113 BABAM1Q9NWV8 329 aa21.71■■□□□ 1.07
ATAD3A-201ENST00000339113 G2E3Q7L622 706 aa21.71■■□□□ 1.07
ATAD3A-201ENST00000339113 LMO7Q8WWI1 1683 aa21.7■■□□□ 1.06
ATAD3A-201ENST00000339113 RGS12O14924 1447 aa21.7■■□□□ 1.06
ATAD3A-201ENST00000339113 CPDO75976 1380 aa21.7■■□□□ 1.06
ATAD3A-201ENST00000339113 CSB-PGBD3P0DP91 1061 aa21.69■■□□□ 1.06
ATAD3A-201ENST00000339113 RNMTO43148 476 aaKnown RBP21.69■■□□□ 1.06
ATAD3A-201ENST00000339113 RTL5Q5HYW3 569 aaPredicted RBP21.69■■□□□ 1.06
ATAD3A-201ENST00000339113 C1orf141Q5JVX7 400 aa21.69■■□□□ 1.06
ATAD3A-201ENST00000339113 NECTIN2Q92692 538 aa21.69■■□□□ 1.06
ATAD3A-201ENST00000339113 KCNQ3O43525 872 aa21.68■■□□□ 1.06
ATAD3A-201ENST00000339113 HDAC1Q13547 482 aaPredicted RBP21.68■■□□□ 1.06
ATAD3A-201ENST00000339113 C1orf115Q9H7X2 142 aa21.68■■□□□ 1.06
ATAD3A-201ENST00000339113 PDZRN3Q9UPQ7 1066 aa21.68■■□□□ 1.06
ATAD3A-201ENST00000339113 RAPGEF4Q8WZA2 1011 aa21.67■■□□□ 1.06
ATAD3A-201ENST00000339113 TEFQ10587 303 aa21.66■■□□□ 1.06
ATAD3A-201ENST00000339113 PTPRCP08575 1304 aa21.66■■□□□ 1.06
ATAD3A-201ENST00000339113 INTS3Q68E01 1043 aaKnown RBP21.66■■□□□ 1.06
ATAD3A-201ENST00000339113 FAM208AQ9UK61 1670 aaKnown RBP21.65■■□□□ 1.06
ATAD3A-201ENST00000339113 EIF4A1P60842 406 aaKnown RBP21.65■■□□□ 1.06
ATAD3A-201ENST00000339113 PRDM11Q9NQV5 511 aa21.65■■□□□ 1.06
ATAD3A-201ENST00000339113 MEGF6O75095 1541 aa21.64■■□□□ 1.05
ATAD3A-201ENST00000339113 BTBD11A6QL63 1104 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms