RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 PDZRN3Q9UPQ7 1066 aa9.22□□□□□ -0.93
TRIM2-201ENST00000338700 ABCA5Q8WWZ7 1642 aa9.22□□□□□ -0.93
TRIM2-201ENST00000338700 KDM4AO75164 1064 aa9.21□□□□□ -0.93
TRIM2-201ENST00000338700 STARD3NLO95772 234 aa9.21□□□□□ -0.93
TRIM2-201ENST00000338700 SIL1Q9H173 461 aa9.21□□□□□ -0.93
TRIM2-201ENST00000338700 NAP1L1P55209 391 aaKnown RBP9.21□□□□□ -0.94
TRIM2-201ENST00000338700 TMEM132AQ24JP5 1023 aa9.21□□□□□ -0.94
TRIM2-201ENST00000338700 ZNF396Q96N95 335 aaPredicted RBP9.21□□□□□ -0.94
TRIM2-201ENST00000338700 ZNF771Q7L3S4 317 aaPredicted RBP9.21□□□□□ -0.94
TRIM2-201ENST00000338700 LETM1O95202 739 aaPredicted RBP9.2□□□□□ -0.94
TRIM2-201ENST00000338700 RBM5P52756 815 aaKnown RBP eCLIP9.2□□□□□ -0.94
TRIM2-201ENST00000338700 SDF4Q9BRK5 362 aa9.2□□□□□ -0.94
TRIM2-201ENST00000338700 ATP2B2Q01814 1243 aa9.2□□□□□ -0.94
TRIM2-201ENST00000338700 ANKRD1Q15327 319 aa9.2□□□□□ -0.94
TRIM2-201ENST00000338700 RABEP1Q15276 862 aa9.2□□□□□ -0.94
TRIM2-201ENST00000338700 NFE2L2Q16236 605 aa9.2□□□□□ -0.94
TRIM2-201ENST00000338700 FANCIQ9NVI1 1328 aa9.2□□□□□ -0.94
TRIM2-201ENST00000338700 CCDC69A6NI79 296 aa9.2□□□□□ -0.94
TRIM2-201ENST00000338700 OFD1O75665 1012 aa9.2□□□□□ -0.94
TRIM2-201ENST00000338700 AK7Q96M32 723 aa9.2□□□□□ -0.94
TRIM2-201ENST00000338700 ZNF652Q9Y2D9 606 aa9.2□□□□□ -0.94
TRIM2-201ENST00000338700 TRAPPC8Q9Y2L5 1435 aa9.2□□□□□ -0.94
TRIM2-201ENST00000338700 IGHMBP2P38935 993 aaKnown RBP9.2□□□□□ -0.94
TRIM2-201ENST00000338700 NEK4P51957 841 aa9.2□□□□□ -0.94
TRIM2-201ENST00000338700 ATF7IPQ6VMQ6 1270 aa9.19□□□□□ -0.94
TRIM2-201ENST00000338700 ZNF428Q96B54 188 aa9.19□□□□□ -0.94
TRIM2-201ENST00000338700 CYP46A1Q9Y6A2 500 aa9.19□□□□□ -0.94
TRIM2-201ENST00000338700 TRIM22Q8IYM9 498 aa9.19□□□□□ -0.94
TRIM2-201ENST00000338700 TARBP1Q13395 1621 aaKnown RBP9.19□□□□□ -0.94
TRIM2-201ENST00000338700 CEP126Q9P2H0 1117 aa9.19□□□□□ -0.94
TRIM2-201ENST00000338700 KDM6BO15054 1643 aa9.18□□□□□ -0.94
TRIM2-201ENST00000338700 KRT18P05783 430 aaKnown RBP9.18□□□□□ -0.94
TRIM2-201ENST00000338700 POLD1P28340 1107 aa9.18□□□□□ -0.94
TRIM2-201ENST00000338700 AACSQ86V21 672 aa9.18□□□□□ -0.94
TRIM2-201ENST00000338700 NOS1P29475 1434 aa9.18□□□□□ -0.94
TRIM2-201ENST00000338700 KINO60870 393 aaKnown RBP9.18□□□□□ -0.94
TRIM2-201ENST00000338700 BCAR3O75815 825 aa9.18□□□□□ -0.94
TRIM2-201ENST00000338700 MVPQ14764 893 aaKnown RBP9.18□□□□□ -0.94
TRIM2-201ENST00000338700 MAGEC2Q9UBF1 373 aaPredicted RBP9.18□□□□□ -0.94
TRIM2-201ENST00000338700 ATP2B1P20020 1258 aa9.18□□□□□ -0.94
TRIM2-201ENST00000338700 AMOTQ4VCS5 1084 aa9.18□□□□□ -0.94
TRIM2-201ENST00000338700 SOGA3Q5TF21 947 aa9.18□□□□□ -0.94
TRIM2-201ENST00000338700 SRGAP3O43295 1099 aa9.17□□□□□ -0.94
TRIM2-201ENST00000338700 FKBP4Q02790 459 aaKnown RBP eCLIP9.17□□□□□ -0.94
TRIM2-201ENST00000338700 BICDL1Q6ZP65 573 aa9.17□□□□□ -0.94
TRIM2-201ENST00000338700 JMYQ8N9B5 988 aa9.17□□□□□ -0.94
TRIM2-201ENST00000338700 PIP4K2AP48426 406 aaPredicted RBP9.17□□□□□ -0.94
TRIM2-201ENST00000338700 AEBP1Q8IUX7 1158 aa9.17□□□□□ -0.94
TRIM2-201ENST00000338700 CTNNA3Q9UI47 895 aa9.17□□□□□ -0.94
TRIM2-201ENST00000338700 STK38Q15208 465 aa9.17□□□□□ -0.94
TRIM2-201ENST00000338700 KCNA6P17658 529 aa9.17□□□□□ -0.94
TRIM2-201ENST00000338700 FILIP1LQ4L180 1135 aa9.17□□□□□ -0.94
TRIM2-201ENST00000338700 PDILTQ8N807 584 aa9.17□□□□□ -0.94
TRIM2-201ENST00000338700 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.17□□□□□ -0.941e-18■■■■■ 447.2
TRIM2-201ENST00000338700 MAP3K1Q13233 1512 aa9.17□□□□□ -0.94
TRIM2-201ENST00000338700 RAI14Q9P0K7 980 aa9.16□□□□□ -0.94
TRIM2-201ENST00000338700 MBD3O95983 291 aa9.16□□□□□ -0.94
TRIM2-201ENST00000338700 TMPOP42166 694 aaKnown RBP9.16□□□□□ -0.94
TRIM2-201ENST00000338700 SETQ01105 290 aaPredicted RBP9.16□□□□□ -0.94
TRIM2-201ENST00000338700 CCDC173Q0VFZ6 552 aa9.16□□□□□ -0.94
TRIM2-201ENST00000338700 MPRIPQ6WCQ1 1025 aa9.16□□□□□ -0.94
TRIM2-201ENST00000338700 ZSCAN29Q8IWY8 852 aaPredicted RBP9.16□□□□□ -0.94
TRIM2-201ENST00000338700 C16orf71Q8IYS4 520 aaPredicted RBP9.16□□□□□ -0.94
TRIM2-201ENST00000338700 NAIPQ13075 1403 aa9.16□□□□□ -0.94
TRIM2-201ENST00000338700 TDO2P48775 406 aa9.16□□□□□ -0.94
TRIM2-201ENST00000338700 ZFYVE27Q5T4F4 411 aa9.16□□□□□ -0.94
TRIM2-201ENST00000338700 NCOA1Q15788 1441 aa9.16□□□□□ -0.94
TRIM2-201ENST00000338700 MAP4K4O95819 1239 aaPredicted RBP9.16□□□□□ -0.94
TRIM2-201ENST00000338700 STK11IPQ8N1F8 1099 aa9.16□□□□□ -0.94
TRIM2-201ENST00000338700 CDKL5O76039 1030 aa9.16□□□□□ -0.94
TRIM2-201ENST00000338700 RDXP35241 583 aaKnown RBP9.16□□□□□ -0.94
TRIM2-201ENST00000338700 CDR1P51861 262 aa9.16□□□□□ -0.94
TRIM2-201ENST00000338700 TMOD2Q9NZR1 351 aa9.16□□□□□ -0.94
TRIM2-201ENST00000338700 IFT57Q9NWB7 429 aa9.15□□□□□ -0.94
TRIM2-201ENST00000338700 LRP2BPQ9P2M1 347 aa9.15□□□□□ -0.94
TRIM2-201ENST00000338700 NOL7Q9UMY1 257 aaKnown RBP9.15□□□□□ -0.94
TRIM2-201ENST00000338700 CHD1LQ86WJ1 897 aa9.15□□□□□ -0.94
TRIM2-201ENST00000338700 RPAP2Q8IXW5 612 aaPredicted RBP9.15□□□□□ -0.94
TRIM2-201ENST00000338700 SMARCE1Q969G3 411 aa9.15□□□□□ -0.94
TRIM2-201ENST00000338700 RUFY1Q96T51 708 aa9.15□□□□□ -0.94
TRIM2-201ENST00000338700 AKAP2Q9Y2D5 859 aa9.15□□□□□ -0.94
TRIM2-201ENST00000338700 HSP90AB2PQ58FF8 381 aa9.15□□□□□ -0.94
TRIM2-201ENST00000338700 NUP133Q8WUM0 1156 aa9.15□□□□□ -0.94
TRIM2-201ENST00000338700 CHRNA2Q15822 529 aa9.15□□□□□ -0.95
TRIM2-201ENST00000338700 LARP1Q6PKG0 1096 aaKnown RBP9.15□□□□□ -0.95
TRIM2-201ENST00000338700 PAXIP1Q6ZW49 1069 aaPredicted RBP9.15□□□□□ -0.95
TRIM2-201ENST00000338700 MNS1Q8NEH6 495 aa9.15□□□□□ -0.95
TRIM2-201ENST00000338700 UBAC1Q9BSL1 405 aa9.15□□□□□ -0.95
TRIM2-201ENST00000338700 DISP1Q96F81 1524 aa9.14□□□□□ -0.95
TRIM2-201ENST00000338700 SYCP1Q15431 976 aa9.14□□□□□ -0.95
TRIM2-201ENST00000338700 ADGRF5Q8IZF2 1346 aa9.14□□□□□ -0.95
TRIM2-201ENST00000338700 DDB1Q16531 1140 aa9.14□□□□□ -0.95
TRIM2-201ENST00000338700 DUSP27Q5VZP5 1158 aa9.14□□□□□ -0.95
TRIM2-201ENST00000338700 PATL2C9JE40 543 aaKnown RBP9.14□□□□□ -0.95
TRIM2-201ENST00000338700 KRT32Q14532 448 aa9.14□□□□□ -0.95
TRIM2-201ENST00000338700 TAF7Q15545 349 aaPredicted RBP9.14□□□□□ -0.95
TRIM2-201ENST00000338700 ACBD3Q9H3P7 528 aa9.14□□□□□ -0.95
TRIM2-201ENST00000338700 TBX22Q9Y458 520 aa9.14□□□□□ -0.95
TRIM2-201ENST00000338700 STK3Q13188 491 aa9.14□□□□□ -0.95
TRIM2-201ENST00000338700 METTL24Q5JXM2 366 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms