RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 EN1Q05925 392 aaPredicted RBP15.31■□□□□ 0.04
SLC28A1-202ENST00000338602 SPG7Q9UQ90 795 aa15.3■□□□□ 0.04
SLC28A1-202ENST00000338602 RGPD2P0DJD1 1756 aa15.3■□□□□ 0.04
SLC28A1-202ENST00000338602 PARD3Q8TEW0 1356 aa15.3■□□□□ 0.04
SLC28A1-202ENST00000338602 MEGF6O75095 1541 aa15.29■□□□□ 0.04
SLC28A1-202ENST00000338602 PCDH11XQ9BZA7 1347 aa15.28■□□□□ 0.04
SLC28A1-202ENST00000338602 PCDH11YQ9BZA8 1340 aa15.28■□□□□ 0.04
SLC28A1-202ENST00000338602 ACSBG1Q96GR2 724 aa15.27■□□□□ 0.04
SLC28A1-202ENST00000338602 CFAP53Q96M91 514 aa15.27■□□□□ 0.04
SLC28A1-202ENST00000338602 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.27■□□□□ 0.04
SLC28A1-202ENST00000338602 IGSF1Q8N6C5 1336 aa15.27■□□□□ 0.03
SLC28A1-202ENST00000338602 NCAPD2Q15021 1401 aa15.27■□□□□ 0.03
SLC28A1-202ENST00000338602 PLSCR1O15162 318 aa15.26■□□□□ 0.03
SLC28A1-202ENST00000338602 EZH2Q15910 746 aaKnown RBP15.26■□□□□ 0.03
SLC28A1-202ENST00000338602 CAMKK2Q96RR4 588 aa15.26■□□□□ 0.03
SLC28A1-202ENST00000338602 TNS1Q9HBL0 1735 aaKnown RBP15.26■□□□□ 0.03
SLC28A1-202ENST00000338602 DIAPH1O60610 1272 aaKnown RBP15.25■□□□□ 0.03
SLC28A1-202ENST00000338602 IL13P35225 146 aa15.25■□□□□ 0.03
SLC28A1-202ENST00000338602 PLEKHG2Q9H7P9 1386 aa15.25■□□□□ 0.03
SLC28A1-202ENST00000338602 DDX10Q13206 875 aaKnown RBP15.24■□□□□ 0.03
SLC28A1-202ENST00000338602 PLEKHO1Q53GL0 409 aaPredicted RBP15.24■□□□□ 0.03
SLC28A1-202ENST00000338602 SYTL4Q96C24 671 aaPredicted RBP15.24■□□□□ 0.03
SLC28A1-202ENST00000338602 SBF2Q86WG5 1849 aa15.24■□□□□ 0.03
SLC28A1-202ENST00000338602 KCNQ2O43526 872 aa15.24■□□□□ 0.03
SLC28A1-202ENST00000338602 AMOTQ4VCS5 1084 aa15.24■□□□□ 0.03
SLC28A1-202ENST00000338602 NBPF14Q5TI25 921 aa15.24■□□□□ 0.03
SLC28A1-202ENST00000338602 SULT6B1Q6IMI4 303 aa15.24■□□□□ 0.03
SLC28A1-202ENST00000338602 KAT6BQ8WYB5 2073 aa15.23■□□□□ 0.03
SLC28A1-202ENST00000338602 IFNL2Q8IZJ0 200 aa15.23■□□□□ 0.03
SLC28A1-202ENST00000338602 PPP2R1AP30153 589 aa15.22■□□□□ 0.03
SLC28A1-202ENST00000338602 PRIM1P49642 420 aaKnown RBP15.22■□□□□ 0.03
SLC28A1-202ENST00000338602 R3HDM1Q15032 1099 aaKnown RBP15.22■□□□□ 0.03
SLC28A1-202ENST00000338602 PTF1AQ7RTS3 328 aa15.22■□□□□ 0.03
SLC28A1-202ENST00000338602 NUDCQ9Y266 331 aa15.22■□□□□ 0.03
SLC28A1-202ENST00000338602 CYP27B1O15528 508 aa15.21■□□□□ 0.02
SLC28A1-202ENST00000338602 HSP90AB1P08238 724 aaKnown RBP15.21■□□□□ 0.02
SLC28A1-202ENST00000338602 DCAF8L1A6NGE4 600 aa15.2■□□□□ 0.02
SLC28A1-202ENST00000338602 U2SURPO15042 1029 aaKnown RBP15.2■□□□□ 0.02
SLC28A1-202ENST00000338602 NHSQ6T4R5 1651 aa15.2■□□□□ 0.02
SLC28A1-202ENST00000338602 NKX1-1Q15270 411 aaPredicted RBP15.19■□□□□ 0.02
SLC28A1-202ENST00000338602 RALBP1Q15311 655 aa15.19■□□□□ 0.02
SLC28A1-202ENST00000338602 C1orf141Q5JVX7 400 aa15.19■□□□□ 0.02
SLC28A1-202ENST00000338602 AEBP1Q8IUX7 1158 aa15.19■□□□□ 0.02
SLC28A1-202ENST00000338602 KDRP35968 1356 aa15.18■□□□□ 0.02
SLC28A1-202ENST00000338602 PKD1L3Q7Z443 1732 aa15.18■□□□□ 0.02
SLC28A1-202ENST00000338602 PHKG2P15735 406 aa15.18■□□□□ 0.02
SLC28A1-202ENST00000338602 HMGB2P26583 209 aaKnown RBP15.18■□□□□ 0.02
SLC28A1-202ENST00000338602 TXNRD1Q16881 649 aa15.18■□□□□ 0.02
SLC28A1-202ENST00000338602 ZNF530Q6P9A1 599 aaPredicted RBP15.18■□□□□ 0.02
SLC28A1-202ENST00000338602 SHANK3Q9BYB0 1731 aa15.17■□□□□ 0.02
SLC28A1-202ENST00000338602 RGPD3A6NKT7 1758 aaPredicted RBP15.17■□□□□ 0.02
SLC28A1-202ENST00000338602 RGPD4Q7Z3J3 1758 aa15.17■□□□□ 0.02
SLC28A1-202ENST00000338602 SENP3-EIF4A1A0A087X0R7 540 aa15.17■□□□□ 0.02
SLC28A1-202ENST00000338602 HMOX1P09601 288 aa15.17■□□□□ 0.02
SLC28A1-202ENST00000338602 MPRIPQ6WCQ1 1025 aa15.17■□□□□ 0.02
SLC28A1-202ENST00000338602 ZNF316A6NFI3 1004 aaPredicted RBP15.15■□□□□ 0.02
SLC28A1-202ENST00000338602 SLC27A3Q5K4L6 730 aa15.15■□□□□ 0.02
SLC28A1-202ENST00000338602 DCAF5Q96JK2 942 aa15.15■□□□□ 0.02
SLC28A1-202ENST00000338602 TMOD3Q9NYL9 352 aa15.15■□□□□ 0.02
SLC28A1-202ENST00000338602 DOT1LQ8TEK3 1739 aa15.15■□□□□ 0.02
SLC28A1-202ENST00000338602 PROM2Q8N271 834 aa15.14■□□□□ 0.01
SLC28A1-202ENST00000338602 SMARCC1Q92922 1105 aaPredicted RBP15.14■□□□□ 0.01
SLC28A1-202ENST00000338602 STK32BQ9NY57 414 aa15.14■□□□□ 0.01
SLC28A1-202ENST00000338602 BTAF1O14981 1849 aa15.14■□□□□ 0.01
SLC28A1-202ENST00000338602 ERVV-2B6SEH9 535 aa15.13■□□□□ 0.01
SLC28A1-202ENST00000338602 COL3A1P02461 1466 aaPredicted RBP15.13■□□□□ 0.01
SLC28A1-202ENST00000338602 U2AF1L5P0DN76 240 aaPredicted RBP15.13■□□□□ 0.01
SLC28A1-202ENST00000338602 U2AF1Q01081 240 aaKnown RBP eCLIP15.13■□□□□ 0.01
SLC28A1-202ENST00000338602 RREB1Q92766 1687 aa15.13■□□□□ 0.01
SLC28A1-202ENST00000338602 AKAP4Q5JQC9 854 aa15.12■□□□□ 0.01
SLC28A1-202ENST00000338602 NEFMP07197 916 aa15.11■□□□□ 0.01
SLC28A1-202ENST00000338602 NUP188Q5SRE5 1749 aa15.11■□□□□ 0.01
SLC28A1-202ENST00000338602 CABP4P57796 275 aa15.11■□□□□ 0.01
SLC28A1-202ENST00000338602 GAS2L2Q8NHY3 880 aa15.11■□□□□ 0.01
SLC28A1-202ENST00000338602 PIGBQ92521 554 aa15.11■□□□□ 0.01
SLC28A1-202ENST00000338602 CCNL1Q9UK58 526 aaPredicted RBP15.11■□□□□ 0.01
SLC28A1-202ENST00000338602 MYBBP1AQ9BQG0 1328 aaKnown RBP15.1■□□□□ 0.01
SLC28A1-202ENST00000338602 FCHSD2O94868 740 aa15.1■□□□□ 0.01
SLC28A1-202ENST00000338602 PNNQ9H307 717 aaKnown RBP15.1■□□□□ 0.01
SLC28A1-202ENST00000338602 PALLDQ8WX93 1383 aa15.09■□□□□ 0.01
SLC28A1-202ENST00000338602 SLC15A2Q16348 729 aa15.09■□□□□ 0.01
SLC28A1-202ENST00000338602 MTHFSDQ2M296 383 aaKnown RBP15.09■□□□□ 0.01
SLC28A1-202ENST00000338602 PRKAR2BP31323 418 aa15.08■□□□□ 0
SLC28A1-202ENST00000338602 ZNF784Q8NCA9 323 aaPredicted RBP15.08■□□□□ 0
SLC28A1-202ENST00000338602 PPP1R1BQ9UD71 204 aaPredicted RBP15.08■□□□□ 0
SLC28A1-202ENST00000338602 RSPH6AQ9H0K4 717 aa15.07■□□□□ 0
SLC28A1-202ENST00000338602 ANO8Q9HCE9 1232 aaPredicted RBP15.07■□□□□ 0
SLC28A1-202ENST00000338602 LRRC4BQ9NT99 713 aa15.07■□□□□ 0
SLC28A1-202ENST00000338602 C1QTNF8P60827 252 aa15.06■□□□□ 0
SLC28A1-202ENST00000338602 PRKRIP1Q9H875 184 aaPredicted RBP15.06■□□□□ 0
SLC28A1-202ENST00000338602 ITGB4P16144 1822 aa15.06■□□□□ 0
SLC28A1-202ENST00000338602 TOGARAM1Q9Y4F4 1720 aa15.05■□□□□ -0
SLC28A1-202ENST00000338602 KDM6AO15550 1401 aaPredicted RBP15.05■□□□□ -0
SLC28A1-202ENST00000338602 GNAT3A8MTJ3 354 aa15.05■□□□□ -0
SLC28A1-202ENST00000338602 NFATC2IPQ8NCF5 419 aa15.05■□□□□ -0
SLC28A1-202ENST00000338602 ASAP1Q9ULH1 1129 aa15.05■□□□□ -0
SLC28A1-202ENST00000338602 LOC102724428A0A0B4J2F2 783 aa15.04■□□□□ -0
SLC28A1-202ENST00000338602 RNMTO43148 476 aaKnown RBP15.04■□□□□ -0
SLC28A1-202ENST00000338602 SIK1P57059 783 aa15.04■□□□□ -0
SLC28A1-202ENST00000338602 ATG3Q9NT62 314 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms