RNA–Protein interactions for RNA: ENST00000337554.7

TSPO-202, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPO, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-202ENST00000337554 KCNH5Q8NCM2 988 aa22.9■■□□□ 1.26
TSPO-202ENST00000337554 QRICH2Q9H0J4 1663 aa22.9■■□□□ 1.26
TSPO-202ENST00000337554 NLRP2Q9NX02 1062 aa22.89■■□□□ 1.25
TSPO-202ENST00000337554 ANKRD36BQ8N2N9 1353 aa22.89■■□□□ 1.25
TSPO-202ENST00000337554 USP54Q70EL1 1684 aa22.88■■□□□ 1.25
TSPO-202ENST00000337554 AMIGO3Q86WK7 504 aa22.88■■□□□ 1.25
TSPO-202ENST00000337554 SYTL4Q96C24 671 aaPredicted RBP22.87■■□□□ 1.25
TSPO-202ENST00000337554 CABP2Q9NPB3 220 aa22.87■■□□□ 1.25
TSPO-202ENST00000337554 CABP1Q9NZU7 370 aa22.87■■□□□ 1.25
TSPO-202ENST00000337554 KDM2AQ9Y2K7 1162 aa22.87■■□□□ 1.25
TSPO-202ENST00000337554 C10orf71Q711Q0 1435 aa22.87■■□□□ 1.25
TSPO-202ENST00000337554 DDX54Q8TDD1 881 aaKnown RBP22.86■■□□□ 1.25
TSPO-202ENST00000337554 KCPQ6ZWJ8 1503 aa22.84■■□□□ 1.25
TSPO-202ENST00000337554 SRPK2P78362 688 aaKnown RBP22.84■■□□□ 1.25
TSPO-202ENST00000337554 KIAA1551Q9HCM1 1747 aa22.84■■□□□ 1.25
TSPO-202ENST00000337554 PXDNLA1KZ92 1463 aa22.84■■□□□ 1.25
TSPO-202ENST00000337554 DOT1LQ8TEK3 1739 aa22.83■■□□□ 1.25
TSPO-202ENST00000337554 SMIM5Q71RC9 77 aa22.83■■□□□ 1.25
TSPO-202ENST00000337554 SMC1BQ8NDV3 1235 aa22.82■■□□□ 1.24
TSPO-202ENST00000337554 FLAD1Q8NFF5 587 aa22.82■■□□□ 1.24
TSPO-202ENST00000337554 RRAGCQ9HB90 399 aa22.82■■□□□ 1.24
TSPO-202ENST00000337554 C5P01031 1676 aa22.81■■□□□ 1.24
TSPO-202ENST00000337554 ARHGAP27Q6ZUM4 889 aa22.81■■□□□ 1.24
TSPO-202ENST00000337554 DCAF11Q8TEB1 546 aa22.81■■□□□ 1.24
TSPO-202ENST00000337554 TOGARAM1Q9Y4F4 1720 aa22.81■■□□□ 1.24
TSPO-202ENST00000337554 TTC21BQ7Z4L5 1316 aa22.81■■□□□ 1.24
TSPO-202ENST00000337554 C9orf131Q5VYM1 1079 aa22.8■■□□□ 1.24
TSPO-202ENST00000337554 BCS1LQ9Y276 419 aa22.79■■□□□ 1.24
TSPO-202ENST00000337554 PLEKHG2Q9H7P9 1386 aa22.77■■□□□ 1.24
TSPO-202ENST00000337554 FOXN1O15353 648 aa22.77■■□□□ 1.24
TSPO-202ENST00000337554 ANKRD24Q8TF21 1146 aa22.76■■□□□ 1.23
TSPO-202ENST00000337554 PRDM10Q9NQV6 1147 aa22.76■■□□□ 1.23
TSPO-202ENST00000337554 USP47Q96K76 1375 aa22.76■■□□□ 1.23
TSPO-202ENST00000337554 N4BP2Q86UW6 1770 aaPredicted RBP22.75■■□□□ 1.23
TSPO-202ENST00000337554 KDM2BQ8NHM5 1336 aa22.75■■□□□ 1.23
TSPO-202ENST00000337554 TAF1LQ8IZX4 1826 aa22.75■■□□□ 1.23
TSPO-202ENST00000337554 KIF13BQ9NQT8 1826 aa22.75■■□□□ 1.23
TSPO-202ENST00000337554 PKD1L3Q7Z443 1732 aa22.74■■□□□ 1.23
TSPO-202ENST00000337554 A0A0G2JLW4 131 aa22.73■■□□□ 1.23
TSPO-202ENST00000337554 TNRC6CQ9HCJ0 1690 aaKnown RBP22.73■■□□□ 1.23
TSPO-202ENST00000337554 C4BP0C0L5 1744 aa22.71■■□□□ 1.23
TSPO-202ENST00000337554 TGFB2P61812 414 aa22.7■■□□□ 1.22
TSPO-202ENST00000337554 STAC3Q96MF2 364 aa22.7■■□□□ 1.22
TSPO-202ENST00000337554 UBR3Q6ZT12 1888 aa22.7■■□□□ 1.22
TSPO-202ENST00000337554 KIAA1210Q9ULL0 1709 aa22.69■■□□□ 1.22
TSPO-202ENST00000337554 TTC21AQ8NDW8 1320 aa22.69■■□□□ 1.22
TSPO-202ENST00000337554 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.69■■□□□ 1.22
TSPO-202ENST00000337554 ABHD8Q96I13 439 aa22.69■■□□□ 1.22
TSPO-202ENST00000337554 PHF14O94880 888 aa22.68■■□□□ 1.22
TSPO-202ENST00000337554 RGS19P49795 217 aa22.68■■□□□ 1.22
TSPO-202ENST00000337554 MLLT1Q03111 559 aaPredicted RBP22.67■■□□□ 1.22
TSPO-202ENST00000337554 BRCA1P38398 1863 aaKnown RBP22.66■■□□□ 1.22
TSPO-202ENST00000337554 FCHSD2O94868 740 aa22.66■■□□□ 1.22
TSPO-202ENST00000337554 DPEP1P16444 411 aa22.66■■□□□ 1.22
TSPO-202ENST00000337554 ZNF692Q9BU19 519 aaPredicted RBP22.65■■□□□ 1.22
TSPO-202ENST00000337554 LTN1O94822 1766 aa22.65■■□□□ 1.22
TSPO-202ENST00000337554 MMP10P09238 476 aa22.64■■□□□ 1.21
TSPO-202ENST00000337554 KCNA3P22001 575 aa22.64■■□□□ 1.21
TSPO-202ENST00000337554 AK7Q96M32 723 aa22.64■■□□□ 1.21
TSPO-202ENST00000337554 RNF181Q9P0P0 153 aa22.64■■□□□ 1.21
TSPO-202ENST00000337554 PALLDQ8WX93 1383 aa22.63■■□□□ 1.21
TSPO-202ENST00000337554 CENPJQ9HC77 1338 aaPredicted RBP22.63■■□□□ 1.21
TSPO-202ENST00000337554 NBPF1Q3BBV0 1214 aa22.63■■□□□ 1.21
TSPO-202ENST00000337554 MKRN1Q9UHC7 482 aaKnown RBP22.63■■□□□ 1.21
TSPO-202ENST00000337554 USP31Q70CQ4 1352 aa22.63■■□□□ 1.21
TSPO-202ENST00000337554 ZCRB1Q8TBF4 217 aaKnown RBP22.62■■□□□ 1.21
TSPO-202ENST00000337554 SSFA2P28290 1259 aa22.61■■□□□ 1.21
TSPO-202ENST00000337554 ARFGEF1Q9Y6D6 1849 aa22.61■■□□□ 1.21
TSPO-202ENST00000337554 CTCFP49711 727 aaPredicted RBP22.6■■□□□ 1.21
TSPO-202ENST00000337554 FAM208AQ9UK61 1670 aaKnown RBP22.6■■□□□ 1.21
TSPO-202ENST00000337554 MEGF6O75095 1541 aa22.6■■□□□ 1.21
TSPO-202ENST00000337554 DCAF5Q96JK2 942 aa22.59■■□□□ 1.21
TSPO-202ENST00000337554 NSD3Q9BZ95 1437 aa22.57■■□□□ 1.2
TSPO-202ENST00000337554 VEGFAP15692 232 aaPredicted RBP22.57■■□□□ 1.2
TSPO-202ENST00000337554 HMGB2P26583 209 aaKnown RBP22.57■■□□□ 1.2
TSPO-202ENST00000337554 LBX1P52954 281 aa22.57■■□□□ 1.2
TSPO-202ENST00000337554 CREBZFQ9NS37 354 aa22.57■■□□□ 1.2
TSPO-202ENST00000337554 SBF1O95248 1867 aa22.57■■□□□ 1.2
TSPO-202ENST00000337554 LINC00116Q8NCU8 138 aa22.55■■□□□ 1.2
TSPO-202ENST00000337554 POTECB2RU33 542 aa22.54■■□□□ 1.2
TSPO-202ENST00000337554 TNRC18O15417 2968 aaPredicted RBP22.53■■□□□ 1.2
TSPO-202ENST00000337554 CNTNAP1P78357 1384 aa22.53■■□□□ 1.2
TSPO-202ENST00000337554 KTN1Q86UP2 1357 aaKnown RBP22.53■■□□□ 1.2
TSPO-202ENST00000337554 NME9Q86XW9 330 aa22.53■■□□□ 1.2
TSPO-202ENST00000337554 IP6K1Q92551 441 aa22.53■■□□□ 1.2
TSPO-202ENST00000337554 LTV1Q96GA3 475 aaPredicted RBP22.53■■□□□ 1.2
TSPO-202ENST00000337554 GLTPD2A6NH11 291 aa22.52■■□□□ 1.2
TSPO-202ENST00000337554 WBP1LQ9NX94 342 aa22.52■■□□□ 1.2
TSPO-202ENST00000337554 KDM6AO15550 1401 aaPredicted RBP22.51■■□□□ 1.19
TSPO-202ENST00000337554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.51■■□□□ 1.19
TSPO-202ENST00000337554 MAP2P11137 1827 aaKnown RBP22.5■■□□□ 1.19
TSPO-202ENST00000337554 MPRIPQ6WCQ1 1025 aa22.5■■□□□ 1.19
TSPO-202ENST00000337554 ZC3H4Q9UPT8 1303 aaKnown RBP22.5■■□□□ 1.19
TSPO-202ENST00000337554 CCDC85CA6NKD9 419 aa22.49■■□□□ 1.19
TSPO-202ENST00000337554 HSPA8P11142 646 aaKnown RBP22.49■■□□□ 1.19
TSPO-202ENST00000337554 PIM2Q9P1W9 311 aa22.49■■□□□ 1.19
TSPO-202ENST00000337554 MON2Q7Z3U7 1717 aa22.48■■□□□ 1.19
TSPO-202ENST00000337554 AIDAQ96BJ3 306 aa22.48■■□□□ 1.19
TSPO-202ENST00000337554 GNPATO15228 680 aa22.47■■□□□ 1.19
TSPO-202ENST00000337554 DALRD3Q5D0E6 543 aaKnown RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms