RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 PCMTD1Q96MG8 357 aaPredicted RBP18.73■□□□□ 0.59
HDAC5-202ENST00000336057 PER1O15534 1290 aaPredicted RBP18.73■□□□□ 0.59
HDAC5-202ENST00000336057 MYL6BP14649 208 aa18.73■□□□□ 0.59
HDAC5-202ENST00000336057 STK38Q15208 465 aa18.73■□□□□ 0.59
HDAC5-202ENST00000336057 CCDC158Q5M9N0 1113 aa18.73■□□□□ 0.59
HDAC5-202ENST00000336057 TBC1D9Q6ZT07 1266 aa18.73■□□□□ 0.59
HDAC5-202ENST00000336057 KIAA0556O60303 1618 aa18.72■□□□□ 0.59
HDAC5-202ENST00000336057 UPF3BQ9BZI7 483 aaKnown RBP18.72■□□□□ 0.59
HDAC5-202ENST00000336057 F6X3S4 739 aa18.72■□□□□ 0.59
HDAC5-202ENST00000336057 C8orf34Q49A92 452 aa18.72■□□□□ 0.59
HDAC5-202ENST00000336057 PTPRCP08575 1304 aa18.71■□□□□ 0.59
HDAC5-202ENST00000336057 POLR3AO14802 1390 aaPredicted RBP18.71■□□□□ 0.59
HDAC5-202ENST00000336057 PZPP20742 1482 aa18.71■□□□□ 0.59
HDAC5-202ENST00000336057 SSFA2P28290 1259 aa18.71■□□□□ 0.59
HDAC5-202ENST00000336057 SART3Q15020 963 aaKnown RBP18.71■□□□□ 0.59
HDAC5-202ENST00000336057 ARGLU1Q9NWB6 273 aaPredicted RBP18.71■□□□□ 0.59
HDAC5-202ENST00000336057 XBP1P17861 261 aa18.71■□□□□ 0.59
HDAC5-202ENST00000336057 MBIPQ9NS73 344 aa18.71■□□□□ 0.59
HDAC5-202ENST00000336057 SPG7Q9UQ90 795 aa18.71■□□□□ 0.59
HDAC5-202ENST00000336057 SYCE3A1L190 88 aa18.71■□□□□ 0.59
HDAC5-202ENST00000336057 GLRX3O76003 335 aaKnown RBP18.71■□□□□ 0.59
HDAC5-202ENST00000336057 PPP6R1Q9UPN7 881 aa18.71■□□□□ 0.59
HDAC5-202ENST00000336057 PDIA4P13667 645 aaKnown RBP18.71■□□□□ 0.58
HDAC5-202ENST00000336057 TAF7Q15545 349 aaPredicted RBP18.71■□□□□ 0.58
HDAC5-202ENST00000336057 PLEKHH1Q9ULM0 1364 aa18.7■□□□□ 0.58
HDAC5-202ENST00000336057 CABP4P57796 275 aa18.7■□□□□ 0.58
HDAC5-202ENST00000336057 ZSCAN30Q86W11 494 aa18.7■□□□□ 0.58
HDAC5-202ENST00000336057 MPNDQ8N594 471 aa18.7■□□□□ 0.58
HDAC5-202ENST00000336057 FMNL2Q96PY5 1086 aa18.7■□□□□ 0.58
HDAC5-202ENST00000336057 CASTP20810 708 aaKnown RBP18.7■□□□□ 0.58
HDAC5-202ENST00000336057 EIF2AK4Q9P2K8 1649 aaKnown RBP18.7■□□□□ 0.58
HDAC5-202ENST00000336057 SHANK2Q9UPX8 1470 aa18.7■□□□□ 0.58
HDAC5-202ENST00000336057 TTC39AQ5SRH9 613 aa18.69■□□□□ 0.58
HDAC5-202ENST00000336057 KIF6Q6ZMV9 814 aa18.69■□□□□ 0.58
HDAC5-202ENST00000336057 SMC2O95347 1197 aa18.69■□□□□ 0.58
HDAC5-202ENST00000336057 KRT32Q14532 448 aa18.69■□□□□ 0.58
HDAC5-202ENST00000336057 ARHGAP45Q92619 1136 aa18.69■□□□□ 0.58
HDAC5-202ENST00000336057 BRMS1Q9HCU9 246 aa18.69■□□□□ 0.58
HDAC5-202ENST00000336057 TEX35Q5T0J7 233 aa18.69■□□□□ 0.58
HDAC5-202ENST00000336057 SPATA32Q96LK8 384 aa18.69■□□□□ 0.58
HDAC5-202ENST00000336057 PIK3C2GO75747 1445 aa18.69■□□□□ 0.58
HDAC5-202ENST00000336057 NUCB1Q02818 461 aa18.68■□□□□ 0.58
HDAC5-202ENST00000336057 ADAMTS12P58397 1594 aa18.68■□□□□ 0.58
HDAC5-202ENST00000336057 DNMT1P26358 1616 aaKnown RBP18.68■□□□□ 0.58
HDAC5-202ENST00000336057 FYB1O15117 783 aa18.67■□□□□ 0.58
HDAC5-202ENST00000336057 KDM4AO75164 1064 aa18.67■□□□□ 0.58
HDAC5-202ENST00000336057 ME1P48163 572 aa18.67■□□□□ 0.58
HDAC5-202ENST00000336057 PDILTQ8N807 584 aa18.67■□□□□ 0.58
HDAC5-202ENST00000336057 RBM10P98175 930 aaKnown RBP18.67■□□□□ 0.58
HDAC5-202ENST00000336057 ANKLE2Q86XL3 938 aa18.67■□□□□ 0.58
HDAC5-202ENST00000336057 KCNH5Q8NCM2 988 aa18.67■□□□□ 0.58
HDAC5-202ENST00000336057 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.67■□□□□ 0.586e-7■■■■□ 23.4
HDAC5-202ENST00000336057 NUP62CLQ9H1M0 184 aa18.67■□□□□ 0.58
HDAC5-202ENST00000336057 UHRF1BP1Q6BDS2 1440 aa18.67■□□□□ 0.58
HDAC5-202ENST00000336057 JMYQ8N9B5 988 aa18.66■□□□□ 0.58
HDAC5-202ENST00000336057 BCL11BQ9C0K0 894 aaPredicted RBP18.66■□□□□ 0.58
HDAC5-202ENST00000336057 LRRFIP2Q9Y608 721 aaKnown RBP18.66■□□□□ 0.58
HDAC5-202ENST00000336057 CFAP45Q9UL16 551 aa18.66■□□□□ 0.58
HDAC5-202ENST00000336057 FAM83GA6ND36 823 aa18.66■□□□□ 0.58
HDAC5-202ENST00000336057 CNNM1Q9NRU3 951 aa18.66■□□□□ 0.58
HDAC5-202ENST00000336057 ATP2B1P20020 1258 aa18.65■□□□□ 0.58
HDAC5-202ENST00000336057 RBM42Q9BTD8 480 aaKnown RBP18.65■□□□□ 0.58
HDAC5-202ENST00000336057 DENND4BO75064 1496 aaPredicted RBP18.65■□□□□ 0.58
HDAC5-202ENST00000336057 TEX14Q8IWB6 1497 aa18.65■□□□□ 0.58
HDAC5-202ENST00000336057 FLIIQ13045 1269 aa18.65■□□□□ 0.58
HDAC5-202ENST00000336057 CEP89Q96ST8 783 aa18.65■□□□□ 0.58
HDAC5-202ENST00000336057 TTC21BQ7Z4L5 1316 aa18.65■□□□□ 0.58
HDAC5-202ENST00000336057 TTC22Q5TAA0 569 aa18.64■□□□□ 0.58
HDAC5-202ENST00000336057 PRPF40BQ6NWY9 871 aaKnown RBP18.64■□□□□ 0.57
HDAC5-202ENST00000336057 CCDC83Q8IWF9 413 aa18.64■□□□□ 0.57
HDAC5-202ENST00000336057 COL17A1Q9UMD9 1497 aaPredicted RBP18.64■□□□□ 0.57
HDAC5-202ENST00000336057 CCDC57Q2TAC2 916 aa18.63■□□□□ 0.57
HDAC5-202ENST00000336057 POGZQ7Z3K3 1410 aa18.63■□□□□ 0.57
HDAC5-202ENST00000336057 RAD21O60216 631 aa18.63■□□□□ 0.57
HDAC5-202ENST00000336057 CARD14Q9BXL6 1004 aa18.63■□□□□ 0.57
HDAC5-202ENST00000336057 RRP12Q5JTH9 1297 aaKnown RBP18.62■□□□□ 0.57
HDAC5-202ENST00000336057 DNAAF4Q8WXU2 420 aa18.62■□□□□ 0.57
HDAC5-202ENST00000336057 CEP126Q9P2H0 1117 aa18.62■□□□□ 0.57
HDAC5-202ENST00000336057 FBLN1P23142 703 aa18.62■□□□□ 0.57
HDAC5-202ENST00000336057 FAM177BA6PVY3 158 aa18.62■□□□□ 0.57
HDAC5-202ENST00000336057 CCP110O43303 1012 aa18.62■□□□□ 0.57
HDAC5-202ENST00000336057 FKBP4Q02790 459 aaKnown RBP eCLIP18.62■□□□□ 0.57
HDAC5-202ENST00000336057 CTNNA3Q9UI47 895 aa18.62■□□□□ 0.57
HDAC5-202ENST00000336057 TRAPPC8Q9Y2L5 1435 aa18.62■□□□□ 0.57
HDAC5-202ENST00000336057 UQCRHLA0A096LP55 91 aa18.61■□□□□ 0.57
HDAC5-202ENST00000336057 UQCRHP07919 91 aa18.61■□□□□ 0.57
HDAC5-202ENST00000336057 RLBP1P12271 317 aa18.61■□□□□ 0.57
HDAC5-202ENST00000336057 BAG4O95429 457 aaKnown RBP18.61■□□□□ 0.57
HDAC5-202ENST00000336057 MAP3K11Q16584 847 aa18.61■□□□□ 0.57
HDAC5-202ENST00000336057 FERMT3Q86UX7 667 aa18.61■□□□□ 0.57
HDAC5-202ENST00000336057 PUS7Q96PZ0 661 aaKnown RBP18.61■□□□□ 0.57
HDAC5-202ENST00000336057 SH2B1Q9NRF2 756 aaPredicted RBP18.61■□□□□ 0.57
HDAC5-202ENST00000336057 XPCQ01831 940 aaPredicted RBP18.61■□□□□ 0.57
HDAC5-202ENST00000336057 TOM1L2Q6ZVM7 507 aa18.61■□□□□ 0.57
HDAC5-202ENST00000336057 DHX8Q14562 1220 aaKnown RBP18.61■□□□□ 0.57
HDAC5-202ENST00000336057 LARP1Q6PKG0 1096 aaKnown RBP18.61■□□□□ 0.57
HDAC5-202ENST00000336057 USHBP1Q8N6Y0 703 aa18.61■□□□□ 0.57
HDAC5-202ENST00000336057 STRN4Q9NRL3 753 aa18.61■□□□□ 0.57
HDAC5-202ENST00000336057 TNNQ9UQP3 1299 aa18.61■□□□□ 0.57
HDAC5-202ENST00000336057 RBM33Q96EV2 1170 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms