RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 TRIM26Q12899 539 aaPredicted RBP34.11■■■■□ 3.05
CDKN3-202ENST00000335183 ZCRB1Q8TBF4 217 aaKnown RBP34.11■■■■□ 3.05
CDKN3-202ENST00000335183 PRIM1P49642 420 aaKnown RBP34.1■■■■□ 3.05
CDKN3-202ENST00000335183 SLC27A3Q5K4L6 730 aa34.1■■■■□ 3.05
CDKN3-202ENST00000335183 LY75O60449 1722 aa34.1■■■■□ 3.05
CDKN3-202ENST00000335183 TUBGCP6Q96RT7 1819 aa34.09■■■■□ 3.05
CDKN3-202ENST00000335183 ARXQ96QS3 562 aa34.09■■■■□ 3.05
CDKN3-202ENST00000335183 AKT1S1Q96B36 256 aa34.08■■■■□ 3.05
CDKN3-202ENST00000335183 SMG6Q86US8 1419 aaKnown RBP34.07■■■■□ 3.04
CDKN3-202ENST00000335183 NBPF6Q5VWK0 638 aa34.07■■■■□ 3.04
CDKN3-202ENST00000335183 USHBP1Q8N6Y0 703 aa34.07■■■■□ 3.04
CDKN3-202ENST00000335183 NBPF4Q96M43 638 aa34.07■■■■□ 3.04
CDKN3-202ENST00000335183 KCNQ4P56696 695 aa34.06■■■■□ 3.04
CDKN3-202ENST00000335183 NSD2O96028 1365 aa34.04■■■■□ 3.04
CDKN3-202ENST00000335183 CDCA8Q53HL2 280 aa34.04■■■■□ 3.04
CDKN3-202ENST00000335183 RAPGEF4Q8WZA2 1011 aa34.02■■■■□ 3.04
CDKN3-202ENST00000335183 CHD4Q14839 1912 aa34.02■■■■□ 3.04
CDKN3-202ENST00000335183 TFCP2L1Q9NZI6 479 aa34.01■■■■□ 3.03
CDKN3-202ENST00000335183 PNPLA7Q6ZV29 1317 aa34.01■■■■□ 3.03
CDKN3-202ENST00000335183 HSP90AB2PQ58FF8 381 aa33.99■■■■□ 3.03
CDKN3-202ENST00000335183 SLC16A10Q8TF71 515 aa33.99■■■■□ 3.03
CDKN3-202ENST00000335183 CGNL1Q0VF96 1302 aa33.99■■■■□ 3.03
CDKN3-202ENST00000335183 TATP17735 454 aaPredicted RBP33.98■■■■□ 3.03
CDKN3-202ENST00000335183 INSRP06213 1382 aa33.98■■■■□ 3.03
CDKN3-202ENST00000335183 COL24A1Q17RW2 1714 aa33.97■■■■□ 3.03
CDKN3-202ENST00000335183 KLHL34Q8N239 644 aa33.97■■■■□ 3.03
CDKN3-202ENST00000335183 CCNL1Q9UK58 526 aaPredicted RBP33.97■■■■□ 3.03
CDKN3-202ENST00000335183 FLT4P35916 1363 aa33.97■■■■□ 3.03
CDKN3-202ENST00000335183 POLD1P28340 1107 aa33.96■■■■□ 3.03
CDKN3-202ENST00000335183 MAP3K5Q99683 1374 aa33.96■■■■□ 3.03
CDKN3-202ENST00000335183 NSD3Q9BZ95 1437 aa33.94■■■■□ 3.02
CDKN3-202ENST00000335183 CARD14Q9BXL6 1004 aa33.92■■■■□ 3.02
CDKN3-202ENST00000335183 KIF24Q5T7B8 1368 aa33.91■■■■□ 3.02
CDKN3-202ENST00000335183 PCDH11XQ9BZA7 1347 aa33.91■■■■□ 3.02
CDKN3-202ENST00000335183 PCDH11YQ9BZA8 1340 aa33.91■■■■□ 3.02
CDKN3-202ENST00000335183 EMILIN1Q9Y6C2 1016 aa33.89■■■■□ 3.02
CDKN3-202ENST00000335183 C5P01031 1676 aa33.89■■■■□ 3.02
CDKN3-202ENST00000335183 MSH5O43196 834 aa33.88■■■■□ 3.01
CDKN3-202ENST00000335183 MAP2P11137 1827 aaKnown RBP33.88■■■■□ 3.01
CDKN3-202ENST00000335183 ITGB4P16144 1822 aa33.88■■■■□ 3.01
CDKN3-202ENST00000335183 GPR162Q16538 588 aa33.87■■■■□ 3.01
CDKN3-202ENST00000335183 ZNF784Q8NCA9 323 aaPredicted RBP33.87■■■■□ 3.01
CDKN3-202ENST00000335183 TAF1LQ8IZX4 1826 aa33.86■■■■□ 3.01
CDKN3-202ENST00000335183 PKD1L3Q7Z443 1732 aa33.85■■■■□ 3.01
CDKN3-202ENST00000335183 TOGARAM1Q9Y4F4 1720 aa33.85■■■■□ 3.01
CDKN3-202ENST00000335183 PPM1GO15355 546 aaPredicted RBP33.85■■■■□ 3.01
CDKN3-202ENST00000335183 ANKRD26Q9UPS8 1709 aa33.84■■■■□ 3.01
CDKN3-202ENST00000335183 MPRIPQ6WCQ1 1025 aa33.83■■■■□ 3.01
CDKN3-202ENST00000335183 PELP1Q8IZL8 1130 aaKnown RBP33.82■■■■□ 3
CDKN3-202ENST00000335183 CYP27B1O15528 508 aa33.81■■■■□ 3
CDKN3-202ENST00000335183 COL23A1Q86Y22 540 aaPredicted RBP33.81■■■■□ 3
CDKN3-202ENST00000335183 TIMELESSQ9UNS1 1208 aa33.8■■■■□ 3
CDKN3-202ENST00000335183 PALLDQ8WX93 1383 aa33.8■■■■□ 3
CDKN3-202ENST00000335183 POLR3GLQ9BT43 218 aa33.79■■■■□ 3
CDKN3-202ENST00000335183 UTRNP46939 3433 aa33.79■■■■□ 3
CDKN3-202ENST00000335183 NLGN2Q8NFZ4 835 aa33.77■■■■□ 3
CDKN3-202ENST00000335183 MSL1Q68DK7 614 aa33.76■■■□□ 2.99
CDKN3-202ENST00000335183 PCGF6Q9BYE7 350 aa33.75■■■□□ 2.99
CDKN3-202ENST00000335183 NCAPD2Q15021 1401 aa33.74■■■□□ 2.99
CDKN3-202ENST00000335183 WASHC2AQ641Q2 1341 aa33.74■■■□□ 2.99
CDKN3-202ENST00000335183 C4BP0C0L5 1744 aa33.73■■■□□ 2.99
CDKN3-202ENST00000335183 HMGB2P26583 209 aaKnown RBP33.72■■■□□ 2.99
CDKN3-202ENST00000335183 SMARCC1Q92922 1105 aaPredicted RBP33.72■■■□□ 2.99
CDKN3-202ENST00000335183 SPG7Q9UQ90 795 aa33.72■■■□□ 2.99
CDKN3-202ENST00000335183 EYA1Q99502 592 aa33.7■■■□□ 2.99
CDKN3-202ENST00000335183 FLAD1Q8NFF5 587 aa33.69■■■□□ 2.98
CDKN3-202ENST00000335183 PIGBQ92521 554 aa33.68■■■□□ 2.98
CDKN3-202ENST00000335183 POLKQ9UBT6 870 aa33.68■■■□□ 2.98
CDKN3-202ENST00000335183 CLSPNQ9HAW4 1339 aa33.68■■■□□ 2.98
CDKN3-202ENST00000335183 UBR3Q6ZT12 1888 aa33.67■■■□□ 2.98
CDKN3-202ENST00000335183 TNNT2P45379 298 aaPredicted RBP33.67■■■□□ 2.98
CDKN3-202ENST00000335183 NKX1-1Q15270 411 aaPredicted RBP33.67■■■□□ 2.98
CDKN3-202ENST00000335183 AK7Q96M32 723 aa33.67■■■□□ 2.98
CDKN3-202ENST00000335183 PHF14O94880 888 aa33.62■■■□□ 2.97
CDKN3-202ENST00000335183 TMOD3Q9NYL9 352 aa33.62■■■□□ 2.97
CDKN3-202ENST00000335183 YBX3P16989 372 aaKnown RBP eCLIP33.61■■■□□ 2.971e-6■■□□□ 14.5
CDKN3-202ENST00000335183 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.61■■■□□ 2.97
CDKN3-202ENST00000335183 EIF4A2Q14240 407 aaKnown RBP33.6■■■□□ 2.97
CDKN3-202ENST00000335183 IFNL2Q8IZJ0 200 aa33.6■■■□□ 2.97
CDKN3-202ENST00000335183 AMIGO3Q86WK7 504 aa33.59■■■□□ 2.97
CDKN3-202ENST00000335183 LOC102724428A0A0B4J2F2 783 aa33.58■■■□□ 2.97
CDKN3-202ENST00000335183 PHKG2P15735 406 aa33.58■■■□□ 2.97
CDKN3-202ENST00000335183 SIK1P57059 783 aa33.58■■■□□ 2.97
CDKN3-202ENST00000335183 SMIM5Q71RC9 77 aa33.58■■■□□ 2.97
CDKN3-202ENST00000335183 GRIN3BO60391 1043 aa33.57■■■□□ 2.96
CDKN3-202ENST00000335183 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.56■■■□□ 2.96
CDKN3-202ENST00000335183 EIF4G2P78344 907 aaKnown RBP eCLIP33.56■■■□□ 2.96
CDKN3-202ENST00000335183 ASAP1Q9ULH1 1129 aa33.56■■■□□ 2.96
CDKN3-202ENST00000335183 LINC00116Q8NCU8 138 aa33.55■■■□□ 2.96
CDKN3-202ENST00000335183 CD2APQ9Y5K6 639 aa33.55■■■□□ 2.96
CDKN3-202ENST00000335183 HSPA5P11021 654 aaKnown RBP33.54■■■□□ 2.96
CDKN3-202ENST00000335183 C1QTNF8P60827 252 aa33.54■■■□□ 2.96
CDKN3-202ENST00000335183 PANK3Q9H999 370 aa33.53■■■□□ 2.96
CDKN3-202ENST00000335183 ATP6V1AP38606 617 aa33.52■■■□□ 2.96
CDKN3-202ENST00000335183 SSFA2P28290 1259 aa33.51■■■□□ 2.95
CDKN3-202ENST00000335183 SENP3-EIF4A1A0A087X0R7 540 aa33.5■■■□□ 2.95
CDKN3-202ENST00000335183 ITPK1Q13572 414 aa33.5■■■□□ 2.95
CDKN3-202ENST00000335183 GNPATO15228 680 aa33.49■■■□□ 2.95
CDKN3-202ENST00000335183 GIGYF1O75420 1035 aaPredicted RBP33.49■■■□□ 2.95
CDKN3-202ENST00000335183 ATG3Q9NT62 314 aa33.49■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms