RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 FMNL2Q96PY5 1086 aa20.28■□□□□ 0.84
TRAPPC11-201ENST00000334690 CFAP45Q9UL16 551 aa20.28■□□□□ 0.84
TRAPPC11-201ENST00000334690 STK3Q13188 491 aa20.27■□□□□ 0.84
TRAPPC11-201ENST00000334690 MIS18AQ9NYP9 233 aa20.27■□□□□ 0.84
TRAPPC11-201ENST00000334690 CCP110O43303 1012 aa20.27■□□□□ 0.84
TRAPPC11-201ENST00000334690 ATP2B1P20020 1258 aa20.27■□□□□ 0.84
TRAPPC11-201ENST00000334690 ZSCAN25Q6NSZ9 544 aa20.27■□□□□ 0.84
TRAPPC11-201ENST00000334690 TOM1L2Q6ZVM7 507 aa20.27■□□□□ 0.84
TRAPPC11-201ENST00000334690 NACAP1Q9BZK3 213 aa20.27■□□□□ 0.84
TRAPPC11-201ENST00000334690 FANCAO15360 1455 aa20.27■□□□□ 0.84
TRAPPC11-201ENST00000334690 FYB1O15117 783 aa20.27■□□□□ 0.84
TRAPPC11-201ENST00000334690 ME1P48163 572 aa20.27■□□□□ 0.84
TRAPPC11-201ENST00000334690 CEBPZQ03701 1054 aaKnown RBP20.27■□□□□ 0.84
TRAPPC11-201ENST00000334690 PTPRCP08575 1304 aa20.27■□□□□ 0.84
TRAPPC11-201ENST00000334690 ANKRD36BQ8N2N9 1353 aa20.27■□□□□ 0.84
TRAPPC11-201ENST00000334690 SMC2O95347 1197 aa20.27■□□□□ 0.83
TRAPPC11-201ENST00000334690 PARD3Q8TEW0 1356 aa20.27■□□□□ 0.83
TRAPPC11-201ENST00000334690 TRIM22Q8IYM9 498 aa20.26■□□□□ 0.83
TRAPPC11-201ENST00000334690 PDILTQ8N807 584 aa20.26■□□□□ 0.83
TRAPPC11-201ENST00000334690 ACBD3Q9H3P7 528 aa20.26■□□□□ 0.83
TRAPPC11-201ENST00000334690 SLC3A2P08195 630 aaKnown RBP20.26■□□□□ 0.83
TRAPPC11-201ENST00000334690 TCEAL9Q9UHQ7 104 aa20.26■□□□□ 0.83
TRAPPC11-201ENST00000334690 GNL3LQ9NVN8 582 aaKnown RBP20.26■□□□□ 0.83
TRAPPC11-201ENST00000334690 PDE4CQ08493 712 aa20.26■□□□□ 0.83
TRAPPC11-201ENST00000334690 FILIP1LQ4L180 1135 aa20.25■□□□□ 0.83
TRAPPC11-201ENST00000334690 STRN4Q9NRL3 753 aa20.25■□□□□ 0.83
TRAPPC11-201ENST00000334690 SPATA32Q96LK8 384 aa20.25■□□□□ 0.83
TRAPPC11-201ENST00000334690 PRDM11Q9NQV5 511 aa20.25■□□□□ 0.83
TRAPPC11-201ENST00000334690 NUTM1Q86Y26 1132 aa20.24■□□□□ 0.83
TRAPPC11-201ENST00000334690 UPF3BQ9BZI7 483 aaKnown RBP20.24■□□□□ 0.83
TRAPPC11-201ENST00000334690 PIP4K2AP48426 406 aaPredicted RBP20.24■□□□□ 0.83
TRAPPC11-201ENST00000334690 RRP12Q5JTH9 1297 aaKnown RBP20.24■□□□□ 0.83
TRAPPC11-201ENST00000334690 TXLNAP40222 546 aa20.24■□□□□ 0.83
TRAPPC11-201ENST00000334690 AMOTQ4VCS5 1084 aa20.24■□□□□ 0.83
TRAPPC11-201ENST00000334690 LARP1Q6PKG0 1096 aaKnown RBP20.24■□□□□ 0.83
TRAPPC11-201ENST00000334690 PRAG1Q86YV5 1406 aa20.24■□□□□ 0.83
TRAPPC11-201ENST00000334690 TTC21BQ7Z4L5 1316 aa20.23■□□□□ 0.83
TRAPPC11-201ENST00000334690 FAM177BA6PVY3 158 aa20.23■□□□□ 0.83
TRAPPC11-201ENST00000334690 NUP62CLQ9H1M0 184 aa20.23■□□□□ 0.83
TRAPPC11-201ENST00000334690 ATP10BO94823 1461 aa20.23■□□□□ 0.83
TRAPPC11-201ENST00000334690 NUP153P49790 1475 aaKnown RBP20.23■□□□□ 0.83
TRAPPC11-201ENST00000334690 TCOF1Q13428 1488 aaKnown RBP20.23■□□□□ 0.83
TRAPPC11-201ENST00000334690 ARHGAP45Q92619 1136 aa20.23■□□□□ 0.83
TRAPPC11-201ENST00000334690 SMARCA5O60264 1052 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC11-201ENST00000334690 HSP90B2PQ58FF3 399 aa20.22■□□□□ 0.83
TRAPPC11-201ENST00000334690 DDX54Q8TDD1 881 aaKnown RBP20.22■□□□□ 0.83
TRAPPC11-201ENST00000334690 TBC1D32Q96NH3 1257 aa20.22■□□□□ 0.83
TRAPPC11-201ENST00000334690 RAPGEF6Q8TEU7 1601 aa20.22■□□□□ 0.83
TRAPPC11-201ENST00000334690 IGHDP01880 384 aa20.22■□□□□ 0.83
TRAPPC11-201ENST00000334690 SPC24Q8NBT2 197 aa20.22■□□□□ 0.83
TRAPPC11-201ENST00000334690 CASTP20810 708 aaKnown RBP20.22■□□□□ 0.83
TRAPPC11-201ENST00000334690 CTDP1Q9Y5B0 961 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC11-201ENST00000334690 CDKL5O76039 1030 aa20.22■□□□□ 0.83
TRAPPC11-201ENST00000334690 HDAC1Q13547 482 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC11-201ENST00000334690 ASXL1Q8IXJ9 1541 aa20.22■□□□□ 0.83
TRAPPC11-201ENST00000334690 FBXO31Q5XUX0 539 aaPredicted RBP20.21■□□□□ 0.83
TRAPPC11-201ENST00000334690 KDM5BQ9UGL1 1544 aa20.21■□□□□ 0.83
TRAPPC11-201ENST00000334690 FKBP4Q02790 459 aaKnown RBP eCLIP20.21■□□□□ 0.83
TRAPPC11-201ENST00000334690 PLEKHH1Q9ULM0 1364 aa20.2■□□□□ 0.82
TRAPPC11-201ENST00000334690 ZSCAN30Q86W11 494 aa20.2■□□□□ 0.82
TRAPPC11-201ENST00000334690 MPHOSPH8Q99549 860 aa20.2■□□□□ 0.82
TRAPPC11-201ENST00000334690 DENND4BO75064 1496 aaPredicted RBP20.2■□□□□ 0.82
TRAPPC11-201ENST00000334690 SH2B1Q9NRF2 756 aaPredicted RBP20.2■□□□□ 0.82
TRAPPC11-201ENST00000334690 F6X3S4 739 aa20.2■□□□□ 0.82
TRAPPC11-201ENST00000334690 NCBP3Q53F19 620 aaKnown RBP20.2■□□□□ 0.82
TRAPPC11-201ENST00000334690 SMARCE1Q969G3 411 aa20.2■□□□□ 0.82
TRAPPC11-201ENST00000334690 CEP57L1Q8IYX8 460 aa20.19■□□□□ 0.82
TRAPPC11-201ENST00000334690 FLIIQ13045 1269 aa20.19■□□□□ 0.82
TRAPPC11-201ENST00000334690 DNAAF4Q8WXU2 420 aa20.19■□□□□ 0.82
TRAPPC11-201ENST00000334690 PLCH2O75038 1416 aa20.19■□□□□ 0.82
TRAPPC11-201ENST00000334690 OFD1O75665 1012 aa20.19■□□□□ 0.82
TRAPPC11-201ENST00000334690 ZC3H6P61129 1189 aaKnown RBP20.19■□□□□ 0.82
TRAPPC11-201ENST00000334690 DUOX2Q9NRD8 1548 aa20.19■□□□□ 0.82
TRAPPC11-201ENST00000334690 DBF4Q9UBU7 674 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC11-201ENST00000334690 DACH1Q9UI36 760 aa20.18■□□□□ 0.82
TRAPPC11-201ENST00000334690 CCDC43Q96MW1 224 aaKnown RBP20.18■□□□□ 0.82
TRAPPC11-201ENST00000334690 TESK2Q96S53 571 aa20.18■□□□□ 0.82
TRAPPC11-201ENST00000334690 KDM4AO75164 1064 aa20.18■□□□□ 0.82
TRAPPC11-201ENST00000334690 TBC1D9Q6ZT07 1266 aa20.18■□□□□ 0.82
TRAPPC11-201ENST00000334690 ITSN2Q9NZM3 1697 aa20.18■□□□□ 0.82
TRAPPC11-201ENST00000334690 SERPINC1P01008 464 aa20.17■□□□□ 0.82
TRAPPC11-201ENST00000334690 PUS7Q96PZ0 661 aaKnown RBP20.17■□□□□ 0.82
TRAPPC11-201ENST00000334690 SYCE3A1L190 88 aa20.17■□□□□ 0.82
TRAPPC11-201ENST00000334690 NAP1L1P55209 391 aaKnown RBP20.17■□□□□ 0.82
TRAPPC11-201ENST00000334690 MAP3K11Q16584 847 aa20.17■□□□□ 0.82
TRAPPC11-201ENST00000334690 MBIPQ9NS73 344 aa20.17■□□□□ 0.82
TRAPPC11-201ENST00000334690 AMOTL2Q9Y2J4 779 aa20.17■□□□□ 0.82
TRAPPC11-201ENST00000334690 LRRFIP2Q9Y608 721 aaKnown RBP20.17■□□□□ 0.82
TRAPPC11-201ENST00000334690 POLR3AO14802 1390 aaPredicted RBP20.17■□□□□ 0.82
TRAPPC11-201ENST00000334690 TNPO1Q92973 898 aaKnown RBP20.17■□□□□ 0.82
TRAPPC11-201ENST00000334690 RUFY1Q96T51 708 aa20.17■□□□□ 0.82
TRAPPC11-201ENST00000334690 SCAND2PQ9GZW5 306 aaPredicted RBP20.17■□□□□ 0.82
TRAPPC11-201ENST00000334690 PHF8Q9UPP1 1060 aa20.17■□□□□ 0.82
TRAPPC11-201ENST00000334690 U3KPZ7 1027 aaPredicted RBP20.17■□□□□ 0.82
TRAPPC11-201ENST00000334690 CCDC69A6NI79 296 aa20.16■□□□□ 0.82
TRAPPC11-201ENST00000334690 SETQ01105 290 aaPredicted RBP20.16■□□□□ 0.82
TRAPPC11-201ENST00000334690 PRPF40BQ6NWY9 871 aaKnown RBP20.15■□□□□ 0.82
TRAPPC11-201ENST00000334690 CCDC112Q8NEF3 446 aa20.15■□□□□ 0.82
TRAPPC11-201ENST00000334690 PCDHB15Q9Y5E8 787 aa20.15■□□□□ 0.82
TRAPPC11-201ENST00000334690 MTMR7Q9Y216 660 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms