RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 TNS2Q63HR2 1409 aa25.01■■□□□ 1.59
HLA-F-217ENST00000334668 FAM196AQ6ZSG2 479 aa25■■□□□ 1.59
HLA-F-217ENST00000334668 EXOC5O00471 708 aa24.99■■□□□ 1.59
HLA-F-217ENST00000334668 BCL9O00512 1426 aa24.97■■□□□ 1.59
HLA-F-217ENST00000334668 ABCB7O75027 752 aa24.97■■□□□ 1.59
HLA-F-217ENST00000334668 EIF4A2Q14240 407 aaKnown RBP24.97■■□□□ 1.59
HLA-F-217ENST00000334668 MARCH10Q8NA82 808 aaPredicted RBP24.97■■□□□ 1.59
HLA-F-217ENST00000334668 SBF2Q86WG5 1849 aa24.97■■□□□ 1.59
HLA-F-217ENST00000334668 MEGF6O75095 1541 aa24.96■■□□□ 1.59
HLA-F-217ENST00000334668 OVOS2A0A0G2JMS6 1433 aa24.95■■□□□ 1.59
HLA-F-217ENST00000334668 RGPD1P0DJD0 1748 aa24.95■■□□□ 1.59
HLA-F-217ENST00000334668 USHBP1Q8N6Y0 703 aa24.95■■□□□ 1.58
HLA-F-217ENST00000334668 EYA1Q99502 592 aa24.95■■□□□ 1.58
HLA-F-217ENST00000334668 MTHFSP49914 203 aa24.94■■□□□ 1.58
HLA-F-217ENST00000334668 SHANK3Q9BYB0 1731 aa24.93■■□□□ 1.58
HLA-F-217ENST00000334668 TNS1Q9HBL0 1735 aaKnown RBP24.93■■□□□ 1.58
HLA-F-217ENST00000334668 IGSF1Q8N6C5 1336 aa24.9■■□□□ 1.58
HLA-F-217ENST00000334668 DDX10Q13206 875 aaKnown RBP24.9■■□□□ 1.58
HLA-F-217ENST00000334668 KAT6BQ8WYB5 2073 aa24.89■■□□□ 1.58
HLA-F-217ENST00000334668 IL13P35225 146 aa24.89■■□□□ 1.58
HLA-F-217ENST00000334668 RAPGEF4Q8WZA2 1011 aa24.89■■□□□ 1.58
HLA-F-217ENST00000334668 ZCRB1Q8TBF4 217 aaKnown RBP24.88■■□□□ 1.57
HLA-F-217ENST00000334668 PKD1L3Q7Z443 1732 aa24.87■■□□□ 1.57
HLA-F-217ENST00000334668 TRIM37O94972 964 aa24.87■■□□□ 1.57
HLA-F-217ENST00000334668 TATP17735 454 aaPredicted RBP24.87■■□□□ 1.57
HLA-F-217ENST00000334668 CNGB1Q14028 1251 aaPredicted RBP24.87■■□□□ 1.57
HLA-F-217ENST00000334668 PLEKHG2Q9H7P9 1386 aa24.87■■□□□ 1.57
HLA-F-217ENST00000334668 COL3A1P02461 1466 aaPredicted RBP24.86■■□□□ 1.57
HLA-F-217ENST00000334668 PARD3Q8TEW0 1356 aa24.86■■□□□ 1.57
HLA-F-217ENST00000334668 SF3B2Q13435 895 aaKnown RBP24.86■■□□□ 1.57
HLA-F-217ENST00000334668 PPP2R1AP30153 589 aa24.83■■□□□ 1.57
HLA-F-217ENST00000334668 DEFB132Q7Z7B7 95 aa24.83■■□□□ 1.57
HLA-F-217ENST00000334668 KDRP35968 1356 aa24.82■■□□□ 1.56
HLA-F-217ENST00000334668 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.82■■□□□ 1.56
HLA-F-217ENST00000334668 BAG6P46379 1132 aa24.81■■□□□ 1.56
HLA-F-217ENST00000334668 DDX54Q8TDD1 881 aaKnown RBP24.81■■□□□ 1.56
HLA-F-217ENST00000334668 BCL11BQ9C0K0 894 aaPredicted RBP24.81■■□□□ 1.56
HLA-F-217ENST00000334668 NHSQ6T4R5 1651 aa24.81■■□□□ 1.56
HLA-F-217ENST00000334668 ZNF316A6NFI3 1004 aaPredicted RBP24.8■■□□□ 1.56
HLA-F-217ENST00000334668 DIAPH1O60610 1272 aaKnown RBP24.8■■□□□ 1.56
HLA-F-217ENST00000334668 PCDH11XQ9BZA7 1347 aa24.79■■□□□ 1.56
HLA-F-217ENST00000334668 PCDH11YQ9BZA8 1340 aa24.79■■□□□ 1.56
HLA-F-217ENST00000334668 PTF1AQ7RTS3 328 aa24.78■■□□□ 1.56
HLA-F-217ENST00000334668 ZBTB22O15209 634 aa24.77■■□□□ 1.56
HLA-F-217ENST00000334668 CYP27B1O15528 508 aa24.77■■□□□ 1.56
HLA-F-217ENST00000334668 APBA3O96018 575 aa24.77■■□□□ 1.56
HLA-F-217ENST00000334668 AEBP1Q8IUX7 1158 aa24.77■■□□□ 1.56
HLA-F-217ENST00000334668 RGPD3A6NKT7 1758 aaPredicted RBP24.77■■□□□ 1.56
HLA-F-217ENST00000334668 RGPD4Q7Z3J3 1758 aa24.77■■□□□ 1.56
HLA-F-217ENST00000334668 EN1Q05925 392 aaPredicted RBP24.76■■□□□ 1.55
HLA-F-217ENST00000334668 RALBP1Q15311 655 aa24.76■■□□□ 1.55
HLA-F-217ENST00000334668 SULT6B1Q6IMI4 303 aa24.76■■□□□ 1.55
HLA-F-217ENST00000334668 CAMKK2Q96RR4 588 aa24.76■■□□□ 1.55
HLA-F-217ENST00000334668 SPG7Q9UQ90 795 aa24.76■■□□□ 1.55
HLA-F-217ENST00000334668 KCNQ2O43526 872 aa24.75■■□□□ 1.55
HLA-F-217ENST00000334668 DOT1LQ8TEK3 1739 aa24.75■■□□□ 1.55
HLA-F-217ENST00000334668 CFAP53Q96M91 514 aa24.74■■□□□ 1.55
HLA-F-217ENST00000334668 BTAF1O14981 1849 aa24.73■■□□□ 1.55
HLA-F-217ENST00000334668 PLSCR1O15162 318 aa24.73■■□□□ 1.55
HLA-F-217ENST00000334668 NKX1-1Q15270 411 aaPredicted RBP24.73■■□□□ 1.55
HLA-F-217ENST00000334668 ACSBG1Q96GR2 724 aa24.73■■□□□ 1.55
HLA-F-217ENST00000334668 RREB1Q92766 1687 aa24.72■■□□□ 1.55
HLA-F-217ENST00000334668 EZH2Q15910 746 aaKnown RBP24.7■■□□□ 1.54
HLA-F-217ENST00000334668 AMOTQ4VCS5 1084 aa24.7■■□□□ 1.54
HLA-F-217ENST00000334668 PLEKHO1Q53GL0 409 aaPredicted RBP24.7■■□□□ 1.54
HLA-F-217ENST00000334668 TOGARAM1Q9Y4F4 1720 aa24.69■■□□□ 1.54
HLA-F-217ENST00000334668 ITGB4P16144 1822 aa24.69■■□□□ 1.54
HLA-F-217ENST00000334668 HMOX1P09601 288 aa24.68■■□□□ 1.54
HLA-F-217ENST00000334668 PHKG2P15735 406 aa24.68■■□□□ 1.54
HLA-F-217ENST00000334668 IFNL2Q8IZJ0 200 aa24.68■■□□□ 1.54
HLA-F-217ENST00000334668 PRIM1P49642 420 aaKnown RBP24.67■■□□□ 1.54
HLA-F-217ENST00000334668 NUP188Q5SRE5 1749 aa24.66■■□□□ 1.54
HLA-F-217ENST00000334668 U2SURPO15042 1029 aaKnown RBP24.65■■□□□ 1.54
HLA-F-217ENST00000334668 PRKRIP1Q9H875 184 aaPredicted RBP24.65■■□□□ 1.54
HLA-F-217ENST00000334668 NUDCQ9Y266 331 aa24.65■■□□□ 1.54
HLA-F-217ENST00000334668 PROM2Q8N271 834 aa24.64■■□□□ 1.54
HLA-F-217ENST00000334668 MYBBP1AQ9BQG0 1328 aaKnown RBP24.63■■□□□ 1.53
HLA-F-217ENST00000334668 ZNF530Q6P9A1 599 aaPredicted RBP24.63■■□□□ 1.53
HLA-F-217ENST00000334668 HSP90AB1P08238 724 aaKnown RBP24.61■■□□□ 1.53
HLA-F-217ENST00000334668 SYTL4Q96C24 671 aaPredicted RBP24.61■■□□□ 1.53
HLA-F-217ENST00000334668 RSPH6AQ9H0K4 717 aa24.6■■□□□ 1.53
HLA-F-217ENST00000334668 LY75O60449 1722 aa24.6■■□□□ 1.53
HLA-F-217ENST00000334668 VIRMAQ69YN4 1812 aaKnown RBP24.59■■□□□ 1.53
HLA-F-217ENST00000334668 DCAF5Q96JK2 942 aa24.59■■□□□ 1.53
HLA-F-217ENST00000334668 ATF5Q9Y2D1 282 aaPredicted RBP24.59■■□□□ 1.53
HLA-F-217ENST00000334668 SCN11AQ9UI33 1791 aa24.59■■□□□ 1.53
HLA-F-217ENST00000334668 KDM6AO15550 1401 aaPredicted RBP24.59■■□□□ 1.53
HLA-F-217ENST00000334668 FCHSD2O94868 740 aa24.58■■□□□ 1.53
HLA-F-217ENST00000334668 U2AF1L5P0DN76 240 aaPredicted RBP24.58■■□□□ 1.53
HLA-F-217ENST00000334668 U2AF1Q01081 240 aaKnown RBP eCLIP24.58■■□□□ 1.53
HLA-F-217ENST00000334668 TXNRD1Q16881 649 aa24.58■■□□□ 1.53
HLA-F-217ENST00000334668 MTHFSDQ2M296 383 aaKnown RBP24.57■■□□□ 1.52
HLA-F-217ENST00000334668 AKAP4Q5JQC9 854 aa24.57■■□□□ 1.52
HLA-F-217ENST00000334668 C1orf141Q5JVX7 400 aa24.57■■□□□ 1.52
HLA-F-217ENST00000334668 ERVV-2B6SEH9 535 aa24.56■■□□□ 1.52
HLA-F-217ENST00000334668 POLA2Q14181 598 aa24.56■■□□□ 1.52
HLA-F-217ENST00000334668 PIGBQ92521 554 aa24.56■■□□□ 1.52
HLA-F-217ENST00000334668 ADAMTS7Q9UKP4 1686 aa24.56■■□□□ 1.52
HLA-F-217ENST00000334668 PRKAR2BP31323 418 aa24.55■■□□□ 1.52
HLA-F-217ENST00000334668 MPRIPQ6WCQ1 1025 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms