RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 TOM1L2Q6ZVM7 507 aa30.26■■■□□ 2.44
TSEN54-201ENST00000333213 NUTM2BA6NNL0 878 aaPredicted RBP30.26■■■□□ 2.43
TSEN54-201ENST00000333213 GNAT3A8MTJ3 354 aa30.26■■■□□ 2.43
TSEN54-201ENST00000333213 NUTM2EB1AL46 878 aaPredicted RBP30.26■■■□□ 2.43
TSEN54-201ENST00000333213 NUTM2AQ8IVF1 878 aaPredicted RBP30.26■■■□□ 2.43
TSEN54-201ENST00000333213 MAP3K5Q99683 1374 aa30.25■■■□□ 2.43
TSEN54-201ENST00000333213 PLEKHO1Q53GL0 409 aaPredicted RBP30.24■■■□□ 2.43
TSEN54-201ENST00000333213 LAS1LQ9Y4W2 734 aaKnown RBP30.24■■■□□ 2.43
TSEN54-201ENST00000333213 JCADQ9P266 1359 aa30.24■■■□□ 2.43
TSEN54-201ENST00000333213 CRB1P82279 1406 aa30.24■■■□□ 2.43
TSEN54-201ENST00000333213 EVA1CP58658 441 aa30.24■■■□□ 2.43
TSEN54-201ENST00000333213 CALD1Q05682 793 aaKnown RBP30.24■■■□□ 2.43
TSEN54-201ENST00000333213 AMOTQ4VCS5 1084 aa30.24■■■□□ 2.43
TSEN54-201ENST00000333213 RAPGEF4Q8WZA2 1011 aa30.24■■■□□ 2.43
TSEN54-201ENST00000333213 TSHZ2Q9NRE2 1034 aa30.24■■■□□ 2.43
TSEN54-201ENST00000333213 IFT57Q9NWB7 429 aa30.24■■■□□ 2.43
TSEN54-201ENST00000333213 HTATSF1O43719 755 aaKnown RBP30.23■■■□□ 2.43
TSEN54-201ENST00000333213 IL17REQ8NFR9 667 aa30.23■■■□□ 2.43
TSEN54-201ENST00000333213 CFAP44Q96MT7 982 aa30.23■■■□□ 2.43
TSEN54-201ENST00000333213 RTF1Q92541 710 aaKnown RBP30.22■■■□□ 2.43
TSEN54-201ENST00000333213 CARD10Q9BWT7 1032 aa30.22■■■□□ 2.43
TSEN54-201ENST00000333213 HSPA1LP34931 641 aa30.21■■■□□ 2.43
TSEN54-201ENST00000333213 MBIPQ9NS73 344 aa30.21■■■□□ 2.43
TSEN54-201ENST00000333213 GNAI1P63096 354 aa30.2■■■□□ 2.43
TSEN54-201ENST00000333213 EXOSC9Q06265 439 aaKnown RBP30.2■■■□□ 2.43
TSEN54-201ENST00000333213 ZNF530Q6P9A1 599 aaPredicted RBP30.2■■■□□ 2.43
TSEN54-201ENST00000333213 TATP17735 454 aaPredicted RBP30.2■■■□□ 2.42
TSEN54-201ENST00000333213 IRX6P78412 446 aaPredicted RBP30.2■■■□□ 2.42
TSEN54-201ENST00000333213 FKBP8Q14318 412 aa30.19■■■□□ 2.42
TSEN54-201ENST00000333213 PLCH1Q4KWH8 1693 aa30.18■■■□□ 2.42
TSEN54-201ENST00000333213 LRRC37A3O60309 1634 aa30.18■■■□□ 2.42
TSEN54-201ENST00000333213 NEFLP07196 543 aa30.18■■■□□ 2.42
TSEN54-201ENST00000333213 AKAP4Q5JQC9 854 aa30.18■■■□□ 2.42
TSEN54-201ENST00000333213 CHL1O00533 1208 aa30.16■■■□□ 2.42
TSEN54-201ENST00000333213 LGR6Q9HBX8 967 aa30.16■■■□□ 2.42
TSEN54-201ENST00000333213 CEMIPQ8WUJ3 1361 aa30.16■■■□□ 2.42
TSEN54-201ENST00000333213 RRP1P56182 461 aaKnown RBP30.15■■■□□ 2.42
TSEN54-201ENST00000333213 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.15■■■□□ 2.42
TSEN54-201ENST00000333213 OVOS2A0A0G2JMS6 1433 aa30.15■■■□□ 2.42
TSEN54-201ENST00000333213 PLEKHG2Q9H7P9 1386 aa30.14■■■□□ 2.42
TSEN54-201ENST00000333213 PKD1L3Q7Z443 1732 aa30.14■■■□□ 2.41
TSEN54-201ENST00000333213 USP35Q9P2H5 1018 aa30.14■■■□□ 2.41
TSEN54-201ENST00000333213 BCAR3O75815 825 aa30.13■■■□□ 2.41
TSEN54-201ENST00000333213 MPRIPQ6WCQ1 1025 aa30.13■■■□□ 2.41
TSEN54-201ENST00000333213 MIS18AQ9NYP9 233 aa30.13■■■□□ 2.41
TSEN54-201ENST00000333213 NRAPQ86VF7 1730 aa30.13■■■□□ 2.41
TSEN54-201ENST00000333213 C1orf141Q5JVX7 400 aa30.12■■■□□ 2.41
TSEN54-201ENST00000333213 SLIT2O94813 1529 aa30.11■■■□□ 2.41
TSEN54-201ENST00000333213 LRP6O75581 1613 aa30.11■■■□□ 2.41
TSEN54-201ENST00000333213 PLIN1O60240 522 aa30.11■■■□□ 2.41
TSEN54-201ENST00000333213 SPG7Q9UQ90 795 aa30.11■■■□□ 2.41
TSEN54-201ENST00000333213 RARSP54136 660 aaKnown RBP30.1■■■□□ 2.41
TSEN54-201ENST00000333213 PARP4Q9UKK3 1724 aaKnown RBP30.1■■■□□ 2.41
TSEN54-201ENST00000333213 CYP27B1O15528 508 aa30.1■■■□□ 2.41
TSEN54-201ENST00000333213 IL2RBP14784 551 aa30.1■■■□□ 2.41
TSEN54-201ENST00000333213 TSPYL6Q8N831 410 aa30.1■■■□□ 2.41
TSEN54-201ENST00000333213 PHKG2P15735 406 aa30.09■■■□□ 2.41
TSEN54-201ENST00000333213 SPATA31A6Q5VVP1 1343 aa30.09■■■□□ 2.41
TSEN54-201ENST00000333213 RNMTO43148 476 aaKnown RBP30.08■■■□□ 2.41
TSEN54-201ENST00000333213 C8orf58Q8NAV2 365 aa30.08■■■□□ 2.41
TSEN54-201ENST00000333213 ADAMTS7Q9UKP4 1686 aa30.07■■■□□ 2.4
TSEN54-201ENST00000333213 CT47B1P0C2W7 299 aaPredicted RBP30.07■■■□□ 2.4
TSEN54-201ENST00000333213 VIRMAQ69YN4 1812 aaKnown RBP30.06■■■□□ 2.4
TSEN54-201ENST00000333213 NWD2Q9ULI1 1742 aa30.06■■■□□ 2.4
TSEN54-201ENST00000333213 KRT24Q2M2I5 525 aa30.06■■■□□ 2.4
TSEN54-201ENST00000333213 KDM6AO15550 1401 aaPredicted RBP30.05■■■□□ 2.4
TSEN54-201ENST00000333213 IFNL2Q8IZJ0 200 aa30.05■■■□□ 2.4
TSEN54-201ENST00000333213 TSPYL4Q9UJ04 414 aa30.05■■■□□ 2.4
TSEN54-201ENST00000333213 VAMP4O75379 141 aa30.04■■■□□ 2.4
TSEN54-201ENST00000333213 TAF7Q15545 349 aaPredicted RBP30.04■■■□□ 2.4
TSEN54-201ENST00000333213 ZCRB1Q8TBF4 217 aaKnown RBP30.04■■■□□ 2.4
TSEN54-201ENST00000333213 C8orf37Q96NL8 207 aa30.04■■■□□ 2.4
TSEN54-201ENST00000333213 BCL2L13Q9BXK5 485 aa30.04■■■□□ 2.4
TSEN54-201ENST00000333213 ELL2O00472 640 aaPredicted RBP30.04■■■□□ 2.4
TSEN54-201ENST00000333213 DISP2A7MBM2 1401 aa30.03■■■□□ 2.4
TSEN54-201ENST00000333213 SHANK3Q9BYB0 1731 aa30.03■■■□□ 2.4
TSEN54-201ENST00000333213 BCL9LQ86UU0 1499 aa30.01■■■□□ 2.39
TSEN54-201ENST00000333213 SPATA31A1Q5TZJ5 1347 aa30.01■■■□□ 2.39
TSEN54-201ENST00000333213 TWISTNBQ3B726 338 aaPredicted RBP30■■■□□ 2.39
TSEN54-201ENST00000333213 NGLY1Q96IV0 654 aa30■■■□□ 2.39
TSEN54-201ENST00000333213 SSH1Q8WYL5 1049 aa30■■■□□ 2.39
TSEN54-201ENST00000333213 SCN11AQ9UI33 1791 aa29.99■■■□□ 2.39
TSEN54-201ENST00000333213 C20orf194Q5TEA3 1177 aa29.99■■■□□ 2.39
TSEN54-201ENST00000333213 PCDH11XQ9BZA7 1347 aa29.99■■■□□ 2.39
TSEN54-201ENST00000333213 PCDH11YQ9BZA8 1340 aa29.99■■■□□ 2.39
TSEN54-201ENST00000333213 TEFQ10587 303 aa29.98■■■□□ 2.39
TSEN54-201ENST00000333213 FNBP4Q8N3X1 1017 aaPredicted RBP29.98■■■□□ 2.39
TSEN54-201ENST00000333213 BABAM1Q9NWV8 329 aa29.98■■■□□ 2.39
TSEN54-201ENST00000333213 UNC5CLQ8IV45 518 aa29.98■■■□□ 2.39
TSEN54-201ENST00000333213 SIPA1L3O60292 1781 aaPredicted RBP29.97■■■□□ 2.39
TSEN54-201ENST00000333213 SPATA31A5Q5VU36 1347 aa29.97■■■□□ 2.39
TSEN54-201ENST00000333213 SPATA31A7Q8IWB4 1347 aa29.97■■■□□ 2.39
TSEN54-201ENST00000333213 DCAF5Q96JK2 942 aa29.96■■■□□ 2.39
TSEN54-201ENST00000333213 WNK3Q9BYP7 1800 aa29.95■■■□□ 2.38
TSEN54-201ENST00000333213 KCNQ3O43525 872 aa29.94■■■□□ 2.38
TSEN54-201ENST00000333213 DDX54Q8TDD1 881 aaKnown RBP29.94■■■□□ 2.38
TSEN54-201ENST00000333213 KDM3BQ7LBC6 1761 aa29.94■■■□□ 2.38
TSEN54-201ENST00000333213 ZNF428Q96B54 188 aa29.93■■■□□ 2.38
TSEN54-201ENST00000333213 SMC4Q9NTJ3 1288 aa29.93■■■□□ 2.38
TSEN54-201ENST00000333213 BTBD11A6QL63 1104 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms