RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 FLT4P35916 1363 aa11.31□□□□□ -0.6
COPB2-201ENST00000333188 BTBD11A6QL63 1104 aa11.31□□□□□ -0.6
COPB2-201ENST00000333188 ATP7BP35670 1465 aa11.31□□□□□ -0.6
COPB2-201ENST00000333188 C8orf34Q49A92 452 aa11.3□□□□□ -0.6
COPB2-201ENST00000333188 SIRT1Q96EB6 747 aa11.3□□□□□ -0.6
COPB2-201ENST00000333188 IFT172Q9UG01 1749 aa11.3□□□□□ -0.6
COPB2-201ENST00000333188 TTC21AQ8NDW8 1320 aa11.3□□□□□ -0.6
COPB2-201ENST00000333188 PRAMEF22A3QJZ6 481 aa11.3□□□□□ -0.6
COPB2-201ENST00000333188 PIP4K2BP78356 416 aa11.3□□□□□ -0.6
COPB2-201ENST00000333188 TOM1L2Q6ZVM7 507 aa11.3□□□□□ -0.6
COPB2-201ENST00000333188 FAM135BQ49AJ0 1406 aa11.3□□□□□ -0.6
COPB2-201ENST00000333188 MYO3AQ8NEV4 1616 aa11.3□□□□□ -0.6
COPB2-201ENST00000333188 PTCD1O75127 700 aaKnown RBP11.29□□□□□ -0.6
COPB2-201ENST00000333188 NOL8Q76FK4 1167 aaKnown RBP11.29□□□□□ -0.6
COPB2-201ENST00000333188 IL1RAPL2Q9NP60 686 aa11.29□□□□□ -0.6
COPB2-201ENST00000333188 NUTM2BA6NNL0 878 aaPredicted RBP11.28□□□□□ -0.6
COPB2-201ENST00000333188 NUTM2EB1AL46 878 aaPredicted RBP11.28□□□□□ -0.6
COPB2-201ENST00000333188 MAP4K4O95819 1239 aaPredicted RBP11.28□□□□□ -0.6
COPB2-201ENST00000333188 NUTM2AQ8IVF1 878 aaPredicted RBP11.28□□□□□ -0.6
COPB2-201ENST00000333188 ZBTB40Q9NUA8 1239 aa11.28□□□□□ -0.6
COPB2-201ENST00000333188 TAF7Q15545 349 aaPredicted RBP11.28□□□□□ -0.6
COPB2-201ENST00000333188 OTUD7AQ8TE49 926 aaPredicted RBP11.28□□□□□ -0.6
COPB2-201ENST00000333188 TMEM94Q12767 1356 aa11.28□□□□□ -0.6
COPB2-201ENST00000333188 TRIM6-TRIM34B2RNG4 842 aa11.28□□□□□ -0.6
COPB2-201ENST00000333188 PLEKHO1Q53GL0 409 aaPredicted RBP11.28□□□□□ -0.6
COPB2-201ENST00000333188 ZNF335Q9H4Z2 1342 aaPredicted RBP11.28□□□□□ -0.6
COPB2-201ENST00000333188 PNPLA6Q8IY17 1366 aa11.28□□□□□ -0.6
COPB2-201ENST00000333188 CHL1O00533 1208 aa11.27□□□□□ -0.61
COPB2-201ENST00000333188 CHD1LQ86WJ1 897 aa11.27□□□□□ -0.61
COPB2-201ENST00000333188 KCNH5Q8NCM2 988 aa11.27□□□□□ -0.61
COPB2-201ENST00000333188 RILPL2Q969X0 211 aa11.27□□□□□ -0.61
COPB2-201ENST00000333188 CHMP3Q9Y3E7 222 aa11.27□□□□□ -0.61
COPB2-201ENST00000333188 IL16Q14005 1332 aa11.27□□□□□ -0.61
COPB2-201ENST00000333188 ZBTB7BO15156 539 aaPredicted RBP11.27□□□□□ -0.61
COPB2-201ENST00000333188 ADAMTS2O95450 1211 aa11.27□□□□□ -0.61
COPB2-201ENST00000333188 FLIIQ13045 1269 aa11.27□□□□□ -0.61
COPB2-201ENST00000333188 ALDH1L2Q3SY69 923 aa11.27□□□□□ -0.61
COPB2-201ENST00000333188 IP6K1Q92551 441 aa11.27□□□□□ -0.61
COPB2-201ENST00000333188 CHPF2Q9P2E5 772 aa11.27□□□□□ -0.61
COPB2-201ENST00000333188 CCDC30Q5VVM6 783 aa11.26□□□□□ -0.61
COPB2-201ENST00000333188 NFATC2IPQ8NCF5 419 aa11.26□□□□□ -0.61
COPB2-201ENST00000333188 DDRGK1Q96HY6 314 aa11.26□□□□□ -0.61
COPB2-201ENST00000333188 LRRC7Q96NW7 1537 aa11.26□□□□□ -0.61
COPB2-201ENST00000333188 SBNO1A3KN83 1393 aa11.26□□□□□ -0.61
COPB2-201ENST00000333188 CT47B1P0C2W7 299 aaPredicted RBP11.25□□□□□ -0.61
COPB2-201ENST00000333188 PI4KAP2A4QPH2 592 aa11.25□□□□□ -0.61
COPB2-201ENST00000333188 PI4KAP1Q8N8J0 262 aa11.25□□□□□ -0.61
COPB2-201ENST00000333188 C9orf78Q9NZ63 289 aaPredicted RBP11.25□□□□□ -0.61
COPB2-201ENST00000333188 NPHP4O75161 1426 aaPredicted RBP11.25□□□□□ -0.61
COPB2-201ENST00000333188 NEURL4Q96JN8 1562 aa11.24□□□□□ -0.61
COPB2-201ENST00000333188 SIL1Q9H173 461 aa11.24□□□□□ -0.61
COPB2-201ENST00000333188 LRRFIP2Q9Y608 721 aaKnown RBP11.24□□□□□ -0.61
COPB2-201ENST00000333188 TTC5Q8N0Z6 440 aa11.24□□□□□ -0.61
COPB2-201ENST00000333188 CCDC85AQ96PX6 553 aaPredicted RBP11.24□□□□□ -0.61
COPB2-201ENST00000333188 AATKQ6ZMQ8 1374 aa11.23□□□□□ -0.61
COPB2-201ENST00000333188 MAP2P11137 1827 aaKnown RBP11.23□□□□□ -0.61
COPB2-201ENST00000333188 TATP17735 454 aaPredicted RBP11.23□□□□□ -0.61
COPB2-201ENST00000333188 CADPS2Q86UW7 1296 aa11.23□□□□□ -0.61
COPB2-201ENST00000333188 SURF6O75683 361 aaKnown RBP11.23□□□□□ -0.61
COPB2-201ENST00000333188 UBTFL1P0CB47 393 aaPredicted RBP11.23□□□□□ -0.61
COPB2-201ENST00000333188 ZNF853P0CG23 659 aa11.23□□□□□ -0.61
COPB2-201ENST00000333188 TAOK2Q9UL54 1235 aa11.23□□□□□ -0.61
COPB2-201ENST00000333188 SIRT2Q8IXJ6 389 aa11.22□□□□□ -0.61
COPB2-201ENST00000333188 NUTM1Q86Y26 1132 aa11.22□□□□□ -0.61
COPB2-201ENST00000333188 C22orf23Q9BZE7 217 aa11.22□□□□□ -0.61
COPB2-201ENST00000333188 RIMS1Q86UR5 1692 aaKnown RBP11.22□□□□□ -0.61
COPB2-201ENST00000333188 CWF19L2Q2TBE0 894 aaKnown RBP11.22□□□□□ -0.61
COPB2-201ENST00000333188 FOXD4L5Q5VV16 416 aaPredicted RBP11.22□□□□□ -0.61
COPB2-201ENST00000333188 RIC3Q7Z5B4 369 aa11.22□□□□□ -0.61
COPB2-201ENST00000333188 FOXD4L4Q8WXT5 416 aaPredicted RBP11.22□□□□□ -0.61
COPB2-201ENST00000333188 USP19O94966 1318 aa11.21□□□□□ -0.61
COPB2-201ENST00000333188 FAM177BA6PVY3 158 aa11.21□□□□□ -0.61
COPB2-201ENST00000333188 BECN1Q14457 450 aa11.21□□□□□ -0.61
COPB2-201ENST00000333188 PROSER3Q2NL68 480 aa11.21□□□□□ -0.61
COPB2-201ENST00000333188 GZF1Q9H116 711 aaPredicted RBP11.21□□□□□ -0.61
COPB2-201ENST00000333188 CHMP4BQ9H444 224 aaKnown RBP11.21□□□□□ -0.61
COPB2-201ENST00000333188 ATP5J2-PTCD1G3V325 749 aa11.21□□□□□ -0.62
COPB2-201ENST00000333188 IGSF1Q8N6C5 1336 aa11.21□□□□□ -0.62
COPB2-201ENST00000333188 ARHGEF25Q86VW2 580 aa11.2□□□□□ -0.62
COPB2-201ENST00000333188 IQSEC2Q5JU85 1478 aa11.2□□□□□ -0.62
COPB2-201ENST00000333188 MSH6P52701 1360 aa11.2□□□□□ -0.62
COPB2-201ENST00000333188 SRGAP3O43295 1099 aa11.2□□□□□ -0.62
COPB2-201ENST00000333188 CABP4P57796 275 aa11.2□□□□□ -0.62
COPB2-201ENST00000333188 COL3A1P02461 1466 aaPredicted RBP11.2□□□□□ -0.62
COPB2-201ENST00000333188 GNAI2P04899 355 aa11.2□□□□□ -0.62
COPB2-201ENST00000333188 RBM42Q9BTD8 480 aaKnown RBP11.2□□□□□ -0.62
COPB2-201ENST00000333188 SLAIN2Q9P270 581 aa11.2□□□□□ -0.62
COPB2-201ENST00000333188 DLC1Q96QB1 1528 aa11.19□□□□□ -0.62
COPB2-201ENST00000333188 DTNBO60941 627 aa11.19□□□□□ -0.62
COPB2-201ENST00000333188 HMMRO75330 724 aa11.19□□□□□ -0.62
COPB2-201ENST00000333188 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.19□□□□□ -0.62
COPB2-201ENST00000333188 PNMA6EA0A0J9YXQ4 647 aa11.19□□□□□ -0.62
COPB2-201ENST00000333188 HSP90AB1P08238 724 aaKnown RBP11.19□□□□□ -0.62
COPB2-201ENST00000333188 FOXD4L6Q3SYB3 417 aaPredicted RBP11.19□□□□□ -0.62
COPB2-201ENST00000333188 FOXD4L3Q6VB84 417 aaPredicted RBP11.19□□□□□ -0.62
COPB2-201ENST00000333188 TECPR2O15040 1411 aa11.19□□□□□ -0.62
COPB2-201ENST00000333188 DEKP35659 375 aaKnown RBP11.19□□□□□ -0.62
COPB2-201ENST00000333188 SRCIN1Q9C0H9 1055 aa11.19□□□□□ -0.62
COPB2-201ENST00000333188 MAP3K5Q99683 1374 aa11.19□□□□□ -0.62
COPB2-201ENST00000333188 CDK12Q9NYV4 1490 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms