RNA–Protein interactions for RNA: ENST00000333149.6

TRIM50-201, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM50, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-201ENST00000333149 CLEC17AQ6ZS10 378 aa22.28■■□□□ 1.16
TRIM50-201ENST00000333149 RPAP2Q8IXW5 612 aaPredicted RBP22.28■■□□□ 1.16
TRIM50-201ENST00000333149 ANKRD44Q8N8A2 993 aa22.28■■□□□ 1.16
TRIM50-201ENST00000333149 ZNF142P52746 1687 aaPredicted RBP22.28■■□□□ 1.16
TRIM50-201ENST00000333149 RGS12O14924 1447 aa22.28■■□□□ 1.16
TRIM50-201ENST00000333149 CD2BP2O95400 341 aaKnown RBP22.28■■□□□ 1.16
TRIM50-201ENST00000333149 GSPT1P15170 499 aaKnown RBP22.28■■□□□ 1.16
TRIM50-201ENST00000333149 SKOR2Q2VWA4 1001 aaPredicted RBP22.28■■□□□ 1.16
TRIM50-201ENST00000333149 PRR36Q9H6K5 1346 aa22.27■■□□□ 1.16
TRIM50-201ENST00000333149 NCKAP5LQ9HCH0 1330 aa22.27■■□□□ 1.16
TRIM50-201ENST00000333149 ATP10DQ9P241 1426 aa22.27■■□□□ 1.16
TRIM50-201ENST00000333149 DCTN1Q14203 1278 aa22.26■■□□□ 1.15
TRIM50-201ENST00000333149 RRAGDQ9NQL2 400 aaPredicted RBP22.26■■□□□ 1.15
TRIM50-201ENST00000333149 EIF4A2Q14240 407 aaKnown RBP22.26■■□□□ 1.15
TRIM50-201ENST00000333149 TTC22Q5TAA0 569 aa22.25■■□□□ 1.15
TRIM50-201ENST00000333149 PTPRCP08575 1304 aa22.24■■□□□ 1.15
TRIM50-201ENST00000333149 SLC26A8Q96RN1 970 aa22.24■■□□□ 1.15
TRIM50-201ENST00000333149 OVOS2A0A0J9YW53 1432 aa22.24■■□□□ 1.15
TRIM50-201ENST00000333149 OVOS2Q6IE36 1432 aa22.24■■□□□ 1.15
TRIM50-201ENST00000333149 TTC21BQ7Z4L5 1316 aa22.23■■□□□ 1.15
TRIM50-201ENST00000333149 RGPD1P0DJD0 1748 aa22.23■■□□□ 1.15
TRIM50-201ENST00000333149 SULT6B1Q6IMI4 303 aa22.23■■□□□ 1.15
TRIM50-201ENST00000333149 ANKLE2Q86XL3 938 aa22.23■■□□□ 1.15
TRIM50-201ENST00000333149 RBM42Q9BTD8 480 aaKnown RBP22.23■■□□□ 1.15
TRIM50-201ENST00000333149 PANK2Q9BZ23 570 aa22.23■■□□□ 1.15
TRIM50-201ENST00000333149 GRPEL1Q9HAV7 217 aa22.23■■□□□ 1.15
TRIM50-201ENST00000333149 PLEKHG3A1L390 1219 aa22.22■■□□□ 1.15
TRIM50-201ENST00000333149 RABEP1Q15276 862 aa22.22■■□□□ 1.15
TRIM50-201ENST00000333149 AEBP1Q8IUX7 1158 aa22.22■■□□□ 1.15
TRIM50-201ENST00000333149 TBX22Q9Y458 520 aa22.22■■□□□ 1.15
TRIM50-201ENST00000333149 CEP85Q6P2H3 762 aa22.21■■□□□ 1.15
TRIM50-201ENST00000333149 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.21■■□□□ 1.15
TRIM50-201ENST00000333149 TOPAZ1Q8N9V7 1692 aa22.2■■□□□ 1.15
TRIM50-201ENST00000333149 RTL1A6NKG5 1358 aa22.2■■□□□ 1.14
TRIM50-201ENST00000333149 USP31Q70CQ4 1352 aa22.2■■□□□ 1.14
TRIM50-201ENST00000333149 NALCNQ8IZF0 1738 aa22.2■■□□□ 1.14
TRIM50-201ENST00000333149 GAS2L2Q8NHY3 880 aa22.2■■□□□ 1.14
TRIM50-201ENST00000333149 USP26Q9BXU7 913 aa22.2■■□□□ 1.14
TRIM50-201ENST00000333149 HSP90AA1P07900 732 aaKnown RBP22.19■■□□□ 1.14
TRIM50-201ENST00000333149 CRB1P82279 1406 aa22.19■■□□□ 1.14
TRIM50-201ENST00000333149 ROBO2Q9HCK4 1378 aa22.19■■□□□ 1.14
TRIM50-201ENST00000333149 KDM4FA0A1W2PPD8 638 aa22.18■■□□□ 1.14
TRIM50-201ENST00000333149 PEAK1Q9H792 1746 aa22.17■■□□□ 1.14
TRIM50-201ENST00000333149 KRT24Q2M2I5 525 aa22.17■■□□□ 1.14
TRIM50-201ENST00000333149 C16orf71Q8IYS4 520 aaPredicted RBP22.17■■□□□ 1.14
TRIM50-201ENST00000333149 ACEP12821 1306 aa22.16■■□□□ 1.14
TRIM50-201ENST00000333149 USP6P35125 1406 aa22.16■■□□□ 1.14
TRIM50-201ENST00000333149 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.16■■□□□ 1.14
TRIM50-201ENST00000333149 CLCN1P35523 988 aa22.16■■□□□ 1.14
TRIM50-201ENST00000333149 SSH2Q76I76 1423 aa22.15■■□□□ 1.14
TRIM50-201ENST00000333149 MCM10Q7L590 875 aa22.15■■□□□ 1.14
TRIM50-201ENST00000333149 DIP2AQ14689 1571 aa22.15■■□□□ 1.14
TRIM50-201ENST00000333149 MSH6P52701 1360 aa22.15■■□□□ 1.14
TRIM50-201ENST00000333149 PTPRUQ92729 1446 aa22.14■■□□□ 1.13
TRIM50-201ENST00000333149 ARHGEF10O15013 1369 aa22.14■■□□□ 1.13
TRIM50-201ENST00000333149 SSFA2P28290 1259 aa22.14■■□□□ 1.13
TRIM50-201ENST00000333149 ARXQ96QS3 562 aa22.14■■□□□ 1.13
TRIM50-201ENST00000333149 IBTKQ9P2D0 1353 aaPredicted RBP22.13■■□□□ 1.13
TRIM50-201ENST00000333149 SDSP20132 328 aa22.13■■□□□ 1.13
TRIM50-201ENST00000333149 HSP90AB2PQ58FF8 381 aa22.13■■□□□ 1.13
TRIM50-201ENST00000333149 GAS2L3Q86XJ1 694 aa22.13■■□□□ 1.13
TRIM50-201ENST00000333149 OSBPL3Q9H4L5 887 aa22.13■■□□□ 1.13
TRIM50-201ENST00000333149 MEIS3Q99687 375 aa22.13■■□□□ 1.13
TRIM50-201ENST00000333149 AMOTL2Q9Y2J4 779 aa22.13■■□□□ 1.13
TRIM50-201ENST00000333149 GOLGA6L22H0YM25 854 aa22.12■■□□□ 1.13
TRIM50-201ENST00000333149 CYP2E1P05181 493 aaPredicted RBP22.12■■□□□ 1.13
TRIM50-201ENST00000333149 OTUD7AQ8TE49 926 aaPredicted RBP22.12■■□□□ 1.13
TRIM50-201ENST00000333149 FOXD4L1Q9NU39 408 aa22.12■■□□□ 1.13
TRIM50-201ENST00000333149 BAG4O95429 457 aaKnown RBP22.11■■□□□ 1.13
TRIM50-201ENST00000333149 NUCB2P80303 420 aa22.11■■□□□ 1.13
TRIM50-201ENST00000333149 CASC1Q6TDU7 716 aa22.11■■□□□ 1.13
TRIM50-201ENST00000333149 KLHL40Q2TBA0 621 aa22.11■■□□□ 1.13
TRIM50-201ENST00000333149 HMMRO75330 724 aa22.1■■□□□ 1.13
TRIM50-201ENST00000333149 SLC4A2P04920 1241 aa22.1■■□□□ 1.13
TRIM50-201ENST00000333149 CWC22Q9HCG8 908 aaKnown RBP22.1■■□□□ 1.13
TRIM50-201ENST00000333149 KDRP35968 1356 aa22.09■■□□□ 1.13
TRIM50-201ENST00000333149 CCT4P50991 539 aaKnown RBP22.09■■□□□ 1.13
TRIM50-201ENST00000333149 TTC21AQ8NDW8 1320 aa22.08■■□□□ 1.13
TRIM50-201ENST00000333149 REC8O95072 547 aa22.08■■□□□ 1.13
TRIM50-201ENST00000333149 SMARCA5O60264 1052 aaPredicted RBP22.07■■□□□ 1.12
TRIM50-201ENST00000333149 MAP3K19Q56UN5 1328 aa22.07■■□□□ 1.12
TRIM50-201ENST00000333149 NPHP4O75161 1426 aaPredicted RBP22.06■■□□□ 1.12
TRIM50-201ENST00000333149 MTHFSDQ2M296 383 aaKnown RBP22.06■■□□□ 1.12
TRIM50-201ENST00000333149 FMN2Q9NZ56 1722 aa22.05■■□□□ 1.12
TRIM50-201ENST00000333149 SBNO1A3KN83 1393 aa22.05■■□□□ 1.12
TRIM50-201ENST00000333149 ST18O60284 1047 aa22.05■■□□□ 1.12
TRIM50-201ENST00000333149 ERC2O15083 957 aa22.04■■□□□ 1.12
TRIM50-201ENST00000333149 HTATSF1O43719 755 aaKnown RBP22.04■■□□□ 1.12
TRIM50-201ENST00000333149 FLT4P35916 1363 aa22.04■■□□□ 1.12
TRIM50-201ENST00000333149 PDE1AP54750 535 aa22.04■■□□□ 1.12
TRIM50-201ENST00000333149 G2E3Q7L622 706 aa22.04■■□□□ 1.12
TRIM50-201ENST00000333149 RTF1Q92541 710 aaKnown RBP22.03■■□□□ 1.12
TRIM50-201ENST00000333149 TSPYL4Q9UJ04 414 aa22.03■■□□□ 1.12
TRIM50-201ENST00000333149 SALL3Q9BXA9 1300 aa22.03■■□□□ 1.12
TRIM50-201ENST00000333149 ESPNB1AK53 854 aa22.02■■□□□ 1.12
TRIM50-201ENST00000333149 DDX49Q9Y6V7 483 aaKnown RBP22.02■■□□□ 1.12
TRIM50-201ENST00000333149 IGSF1Q8N6C5 1336 aa22.02■■□□□ 1.12
TRIM50-201ENST00000333149 KCNA6P17658 529 aa22.02■■□□□ 1.12
TRIM50-201ENST00000333149 XRN1Q8IZH2 1706 aaKnown RBP22.01■■□□□ 1.11
TRIM50-201ENST00000333149 FOXO3O43524 673 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms