RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 RBM33Q96EV2 1170 aaKnown RBP21.97■■□□□ 1.11
DDX28-201ENST00000332395 DAXXQ9UER7 740 aaPredicted RBP21.97■■□□□ 1.11
DDX28-201ENST00000332395 ADGRL3Q9HAR2 1447 aa21.96■■□□□ 1.11
DDX28-201ENST00000332395 SLC4A3P48751 1232 aa21.95■■□□□ 1.1
DDX28-201ENST00000332395 RTF1Q92541 710 aaKnown RBP21.95■■□□□ 1.1
DDX28-201ENST00000332395 GAS2L2Q8NHY3 880 aa21.94■■□□□ 1.1
DDX28-201ENST00000332395 NUCB1Q02818 461 aa21.94■■□□□ 1.1
DDX28-201ENST00000332395 C1orf115Q9H7X2 142 aa21.94■■□□□ 1.1
DDX28-201ENST00000332395 C14orf37Q86TY3 774 aa21.93■■□□□ 1.1
DDX28-201ENST00000332395 NWD1Q149M9 1564 aa21.93■■□□□ 1.1
DDX28-201ENST00000332395 NPHP4O75161 1426 aaPredicted RBP21.92■■□□□ 1.1
DDX28-201ENST00000332395 UPF2Q9HAU5 1272 aaKnown RBP21.91■■□□□ 1.1
DDX28-201ENST00000332395 MIS18AQ9NYP9 233 aa21.9■■□□□ 1.1
DDX28-201ENST00000332395 RTL1A6NKG5 1358 aa21.9■■□□□ 1.1
DDX28-201ENST00000332395 RGS12O14924 1447 aa21.9■■□□□ 1.1
DDX28-201ENST00000332395 LTN1O94822 1766 aa21.9■■□□□ 1.1
DDX28-201ENST00000332395 GCC1Q96CN9 775 aa21.89■■□□□ 1.1
DDX28-201ENST00000332395 TSPYL4Q9UJ04 414 aa21.89■■□□□ 1.1
DDX28-201ENST00000332395 ESCO1Q5FWF5 840 aa21.89■■□□□ 1.09
DDX28-201ENST00000332395 CHD1LQ86WJ1 897 aa21.89■■□□□ 1.09
DDX28-201ENST00000332395 LRRC37A3O60309 1634 aa21.88■■□□□ 1.09
DDX28-201ENST00000332395 HTATSF1O43719 755 aaKnown RBP21.88■■□□□ 1.09
DDX28-201ENST00000332395 INTS3Q68E01 1043 aaKnown RBP21.88■■□□□ 1.09
DDX28-201ENST00000332395 LNPKQ9C0E8 428 aa21.88■■□□□ 1.09
DDX28-201ENST00000332395 SIRT2Q8IXJ6 389 aa21.88■■□□□ 1.09
DDX28-201ENST00000332395 LTV1Q96GA3 475 aaPredicted RBP21.88■■□□□ 1.09
DDX28-201ENST00000332395 TBC1D32Q96NH3 1257 aa21.87■■□□□ 1.09
DDX28-201ENST00000332395 PTPRCP08575 1304 aa21.87■■□□□ 1.09
DDX28-201ENST00000332395 NFAT5O94916 1531 aa21.87■■□□□ 1.09
DDX28-201ENST00000332395 PSME1Q06323 249 aa21.87■■□□□ 1.09
DDX28-201ENST00000332395 GNAT3A8MTJ3 354 aa21.85■■□□□ 1.09
DDX28-201ENST00000332395 SLC4A2P04920 1241 aa21.84■■□□□ 1.09
DDX28-201ENST00000332395 ANKRD45Q5TZF3 282 aa21.84■■□□□ 1.09
DDX28-201ENST00000332395 IP6K1Q92551 441 aa21.84■■□□□ 1.09
DDX28-201ENST00000332395 MAP3K5Q99683 1374 aa21.83■■□□□ 1.09
DDX28-201ENST00000332395 USP35Q9P2H5 1018 aa21.82■■□□□ 1.08
DDX28-201ENST00000332395 MSH6P52701 1360 aa21.81■■□□□ 1.08
DDX28-201ENST00000332395 USHBP1Q8N6Y0 703 aa21.81■■□□□ 1.08
DDX28-201ENST00000332395 KCNH5Q8NCM2 988 aa21.81■■□□□ 1.08
DDX28-201ENST00000332395 BECN1Q14457 450 aa21.8■■□□□ 1.08
DDX28-201ENST00000332395 IL17REQ8NFR9 667 aa21.8■■□□□ 1.08
DDX28-201ENST00000332395 PHRF1Q9P1Y6 1649 aaKnown RBP21.79■■□□□ 1.08
DDX28-201ENST00000332395 ORAI2Q96SN7 254 aa21.79■■□□□ 1.08
DDX28-201ENST00000332395 ATP10DQ9P241 1426 aa21.79■■□□□ 1.08
DDX28-201ENST00000332395 MFAP1P55081 439 aaKnown RBP21.78■■□□□ 1.08
DDX28-201ENST00000332395 BMP2KLQ5H9B9 411 aa21.77■■□□□ 1.08
DDX28-201ENST00000332395 G2E3Q7L622 706 aa21.77■■□□□ 1.08
DDX28-201ENST00000332395 NBPF6Q5VWK0 638 aa21.77■■□□□ 1.07
DDX28-201ENST00000332395 NBPF4Q96M43 638 aa21.77■■□□□ 1.07
DDX28-201ENST00000332395 ANKRD44Q8N8A2 993 aa21.76■■□□□ 1.07
DDX28-201ENST00000332395 ZBTB7CA1YPR0 619 aa21.75■■□□□ 1.07
DDX28-201ENST00000332395 TAF7Q15545 349 aaPredicted RBP21.75■■□□□ 1.07
DDX28-201ENST00000332395 STK31Q9BXU1 1019 aa21.75■■□□□ 1.07
DDX28-201ENST00000332395 C22orf23Q9BZE7 217 aa21.75■■□□□ 1.07
DDX28-201ENST00000332395 DCTPP1Q9H773 170 aa21.75■■□□□ 1.07
DDX28-201ENST00000332395 BABAM1Q9NWV8 329 aa21.75■■□□□ 1.07
DDX28-201ENST00000332395 FAM208AQ9UK61 1670 aaKnown RBP21.75■■□□□ 1.07
DDX28-201ENST00000332395 XPCQ01831 940 aaPredicted RBP21.75■■□□□ 1.07
DDX28-201ENST00000332395 RPAP2Q8IXW5 612 aaPredicted RBP21.75■■□□□ 1.07
DDX28-201ENST00000332395 MEIS3Q99687 375 aa21.75■■□□□ 1.07
DDX28-201ENST00000332395 CEP85Q6P2H3 762 aa21.74■■□□□ 1.07
DDX28-201ENST00000332395 PROSER2Q86WR7 435 aaPredicted RBP21.74■■□□□ 1.07
DDX28-201ENST00000332395 DNAJC5Q9H3Z4 198 aa21.74■■□□□ 1.07
DDX28-201ENST00000332395 SLIT3O75094 1523 aa21.74■■□□□ 1.07
DDX28-201ENST00000332395 CCDC30Q5VVM6 783 aa21.73■■□□□ 1.07
DDX28-201ENST00000332395 SOS1Q07889 1333 aaPredicted RBP21.73■■□□□ 1.07
DDX28-201ENST00000332395 RGPD2P0DJD1 1756 aa21.73■■□□□ 1.07
DDX28-201ENST00000332395 F6X3S4 739 aa21.72■■□□□ 1.07
DDX28-201ENST00000332395 GCP02774 474 aa21.72■■□□□ 1.07
DDX28-201ENST00000332395 CCT4P50991 539 aaKnown RBP21.72■■□□□ 1.07
DDX28-201ENST00000332395 NFKBIBQ15653 356 aa21.72■■□□□ 1.07
DDX28-201ENST00000332395 IL27Q8NEV9 243 aa21.72■■□□□ 1.07
DDX28-201ENST00000332395 SLC4A10Q6U841 1118 aa21.72■■□□□ 1.07
DDX28-201ENST00000332395 TRPM3Q9HCF6 1732 aaPredicted RBP21.72■■□□□ 1.07
DDX28-201ENST00000332395 CEMIPQ8WUJ3 1361 aa21.72■■□□□ 1.07
DDX28-201ENST00000332395 ARHGEF25Q86VW2 580 aa21.71■■□□□ 1.07
DDX28-201ENST00000332395 PRKCSHP14314 528 aaPredicted RBP21.7■■□□□ 1.06
DDX28-201ENST00000332395 KIF1AQ12756 1690 aa21.7■■□□□ 1.06
DDX28-201ENST00000332395 FLIIQ13045 1269 aa21.7■■□□□ 1.06
DDX28-201ENST00000332395 LRRC59Q96AG4 307 aaKnown RBP21.7■■□□□ 1.06
DDX28-201ENST00000332395 TBC1D2Q9BYX2 928 aa21.7■■□□□ 1.06
DDX28-201ENST00000332395 ANO8Q9HCE9 1232 aaPredicted RBP21.7■■□□□ 1.06
DDX28-201ENST00000332395 C1orf167Q5SNV9 1468 aa21.69■■□□□ 1.06
DDX28-201ENST00000332395 MED1Q15648 1581 aaPredicted RBP21.69■■□□□ 1.06
DDX28-201ENST00000332395 LMOD2Q6P5Q4 547 aa21.69■■□□□ 1.06
DDX28-201ENST00000332395 CACNA1FO60840 1977 aa21.68■■□□□ 1.06
DDX28-201ENST00000332395 NECTIN2Q92692 538 aa21.68■■□□□ 1.06
DDX28-201ENST00000332395 C19orf44Q9H6X5 657 aa21.68■■□□□ 1.06
DDX28-201ENST00000332395 PLEKHG5O94827 1062 aa21.67■■□□□ 1.06
DDX28-201ENST00000332395 FKBP5Q13451 457 aaPredicted RBP21.67■■□□□ 1.06
DDX28-201ENST00000332395 KRT28Q7Z3Y7 464 aa21.67■■□□□ 1.06
DDX28-201ENST00000332395 PLEKHM2Q8IWE5 1019 aa21.67■■□□□ 1.06
DDX28-201ENST00000332395 LMO7Q8WWI1 1683 aa21.66■■□□□ 1.06
DDX28-201ENST00000332395 NCAPD2Q15021 1401 aa21.66■■□□□ 1.06
DDX28-201ENST00000332395 LGR6Q9HBX8 967 aa21.65■■□□□ 1.06
DDX28-201ENST00000332395 RBM25P49756 843 aaKnown RBP21.65■■□□□ 1.06
DDX28-201ENST00000332395 HMMRO75330 724 aa21.64■■□□□ 1.06
DDX28-201ENST00000332395 GSPT1P15170 499 aaKnown RBP21.64■■□□□ 1.05
DDX28-201ENST00000332395 PLEKHO1Q53GL0 409 aaPredicted RBP21.64■■□□□ 1.05
DDX28-201ENST00000332395 AKAP4Q5JQC9 854 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms