RNA–Protein interactions for RNA: ENST00000331559.9

MEIS3-201, Transcript of Meis homeobox 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MEIS3, Length 2,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-201ENST00000331559 CRB1P82279 1406 aa29.33■■■□□ 2.29
MEIS3-201ENST00000331559 MCM10Q7L590 875 aa29.33■■■□□ 2.29
MEIS3-201ENST00000331559 SMC5Q8IY18 1101 aa29.33■■■□□ 2.29
MEIS3-201ENST00000331559 RTF1Q92541 710 aaKnown RBP29.32■■■□□ 2.28
MEIS3-201ENST00000331559 MTHFSDQ2M296 383 aaKnown RBP29.3■■■□□ 2.28
MEIS3-201ENST00000331559 HTATSF1O43719 755 aaKnown RBP29.3■■■□□ 2.28
MEIS3-201ENST00000331559 NWD1Q149M9 1564 aa29.29■■■□□ 2.28
MEIS3-201ENST00000331559 ZBTB7BO15156 539 aaPredicted RBP29.29■■■□□ 2.28
MEIS3-201ENST00000331559 NUTM2GQ5VZR2 741 aa29.29■■■□□ 2.28
MEIS3-201ENST00000331559 C14orf37Q86TY3 774 aa29.26■■■□□ 2.27
MEIS3-201ENST00000331559 ESCO1Q5FWF5 840 aa29.24■■■□□ 2.27
MEIS3-201ENST00000331559 PSME1Q06323 249 aa29.24■■■□□ 2.27
MEIS3-201ENST00000331559 NFAT5O94916 1531 aa29.23■■■□□ 2.27
MEIS3-201ENST00000331559 LRRC37A3O60309 1634 aa29.22■■■□□ 2.27
MEIS3-201ENST00000331559 FOXO3O43524 673 aa29.22■■■□□ 2.27
MEIS3-201ENST00000331559 KCNH5Q8NCM2 988 aa29.21■■■□□ 2.27
MEIS3-201ENST00000331559 RBM33Q96EV2 1170 aaKnown RBP29.21■■■□□ 2.27
MEIS3-201ENST00000331559 PTPRCP08575 1304 aa29.21■■■□□ 2.27
MEIS3-201ENST00000331559 TSPYL4Q9UJ04 414 aa29.21■■■□□ 2.27
MEIS3-201ENST00000331559 LTN1O94822 1766 aa29.2■■■□□ 2.27
MEIS3-201ENST00000331559 IP6K1Q92551 441 aa29.2■■■□□ 2.27
MEIS3-201ENST00000331559 NUCB1Q02818 461 aa29.2■■■□□ 2.26
MEIS3-201ENST00000331559 GCC1Q96CN9 775 aa29.2■■■□□ 2.26
MEIS3-201ENST00000331559 UPF2Q9HAU5 1272 aaKnown RBP29.18■■■□□ 2.26
MEIS3-201ENST00000331559 PHRF1Q9P1Y6 1649 aaKnown RBP29.18■■■□□ 2.26
MEIS3-201ENST00000331559 GNAT3A8MTJ3 354 aa29.18■■■□□ 2.26
MEIS3-201ENST00000331559 KRT24Q2M2I5 525 aa29.18■■■□□ 2.26
MEIS3-201ENST00000331559 INTS3Q68E01 1043 aaKnown RBP29.18■■■□□ 2.26
MEIS3-201ENST00000331559 MAP3K5Q99683 1374 aa29.16■■■□□ 2.26
MEIS3-201ENST00000331559 RGS12O14924 1447 aa29.15■■■□□ 2.26
MEIS3-201ENST00000331559 BABAM1Q9NWV8 329 aa29.15■■■□□ 2.26
MEIS3-201ENST00000331559 FRAT2O75474 233 aaPredicted RBP29.14■■■□□ 2.26
MEIS3-201ENST00000331559 TBC1D32Q96NH3 1257 aa29.14■■■□□ 2.26
MEIS3-201ENST00000331559 GSE1Q14687 1217 aa29.14■■■□□ 2.25
MEIS3-201ENST00000331559 CHD1LQ86WJ1 897 aa29.14■■■□□ 2.25
MEIS3-201ENST00000331559 LTV1Q96GA3 475 aaPredicted RBP29.14■■■□□ 2.25
MEIS3-201ENST00000331559 BECN1Q14457 450 aa29.13■■■□□ 2.25
MEIS3-201ENST00000331559 SOS1Q07889 1333 aaPredicted RBP29.13■■■□□ 2.25
MEIS3-201ENST00000331559 SLIT3O75094 1523 aa29.11■■■□□ 2.25
MEIS3-201ENST00000331559 KIF1AQ12756 1690 aa29.11■■■□□ 2.25
MEIS3-201ENST00000331559 PROSER2Q86WR7 435 aaPredicted RBP29.11■■■□□ 2.25
MEIS3-201ENST00000331559 C1orf115Q9H7X2 142 aa29.11■■■□□ 2.25
MEIS3-201ENST00000331559 MSH6P52701 1360 aa29.1■■■□□ 2.25
MEIS3-201ENST00000331559 MIS18AQ9NYP9 233 aa29.1■■■□□ 2.25
MEIS3-201ENST00000331559 ORAI2Q96SN7 254 aa29.08■■■□□ 2.25
MEIS3-201ENST00000331559 SLC4A2P04920 1241 aa29.08■■■□□ 2.25
MEIS3-201ENST00000331559 LNPKQ9C0E8 428 aa29.07■■■□□ 2.24
MEIS3-201ENST00000331559 SIRT2Q8IXJ6 389 aa29.06■■■□□ 2.24
MEIS3-201ENST00000331559 DNAJC5Q9H3Z4 198 aa29.05■■■□□ 2.24
MEIS3-201ENST00000331559 C19orf44Q9H6X5 657 aa29.05■■■□□ 2.24
MEIS3-201ENST00000331559 C1orf167Q5SNV9 1468 aa29.05■■■□□ 2.24
MEIS3-201ENST00000331559 TAF7Q15545 349 aaPredicted RBP29.05■■■□□ 2.24
MEIS3-201ENST00000331559 IL17REQ8NFR9 667 aa29.05■■■□□ 2.24
MEIS3-201ENST00000331559 STK31Q9BXU1 1019 aa29.05■■■□□ 2.24
MEIS3-201ENST00000331559 TRPM3Q9HCF6 1732 aaPredicted RBP29.04■■■□□ 2.24
MEIS3-201ENST00000331559 ANKRD45Q5TZF3 282 aa29.04■■■□□ 2.24
MEIS3-201ENST00000331559 USHBP1Q8N6Y0 703 aa29.03■■■□□ 2.24
MEIS3-201ENST00000331559 GCP02774 474 aa29.03■■■□□ 2.24
MEIS3-201ENST00000331559 CCDC30Q5VVM6 783 aa29.02■■■□□ 2.24
MEIS3-201ENST00000331559 NBPF6Q5VWK0 638 aa29.02■■■□□ 2.24
MEIS3-201ENST00000331559 ARHGEF25Q86VW2 580 aa29.02■■■□□ 2.24
MEIS3-201ENST00000331559 RPAP2Q8IXW5 612 aaPredicted RBP29.02■■■□□ 2.24
MEIS3-201ENST00000331559 NBPF4Q96M43 638 aa29.02■■■□□ 2.24
MEIS3-201ENST00000331559 MST1RQ04912 1400 aa29.02■■■□□ 2.24
MEIS3-201ENST00000331559 SLKQ9H2G2 1235 aaPredicted RBP29.01■■■□□ 2.23
MEIS3-201ENST00000331559 CCT4P50991 539 aaKnown RBP29■■■□□ 2.23
MEIS3-201ENST00000331559 ANKRD44Q8N8A2 993 aa29■■■□□ 2.23
MEIS3-201ENST00000331559 TBC1D2Q9BYX2 928 aa29■■■□□ 2.23
MEIS3-201ENST00000331559 CEMIPQ8WUJ3 1361 aa29■■■□□ 2.23
MEIS3-201ENST00000331559 ATP10DQ9P241 1426 aa29■■■□□ 2.23
MEIS3-201ENST00000331559 KRT28Q7Z3Y7 464 aa29■■■□□ 2.23
MEIS3-201ENST00000331559 NCAPD2Q15021 1401 aa28.99■■■□□ 2.23
MEIS3-201ENST00000331559 FAM208AQ9UK61 1670 aaKnown RBP28.99■■■□□ 2.23
MEIS3-201ENST00000331559 BMP2KLQ5H9B9 411 aa28.99■■■□□ 2.23
MEIS3-201ENST00000331559 NCOA3Q9Y6Q9 1424 aa28.99■■■□□ 2.23
MEIS3-201ENST00000331559 ZBTB7CA1YPR0 619 aa28.98■■■□□ 2.23
MEIS3-201ENST00000331559 ANTXR1Q9H6X2 564 aa28.98■■■□□ 2.23
MEIS3-201ENST00000331559 DCTPP1Q9H773 170 aa28.98■■■□□ 2.23
MEIS3-201ENST00000331559 DCCP43146 1447 aa28.98■■■□□ 2.23
MEIS3-201ENST00000331559 MED1Q15648 1581 aaPredicted RBP28.98■■■□□ 2.23
MEIS3-201ENST00000331559 IL27Q8NEV9 243 aa28.97■■■□□ 2.23
MEIS3-201ENST00000331559 XPCQ01831 940 aaPredicted RBP28.96■■■□□ 2.23
MEIS3-201ENST00000331559 MFAP1P55081 439 aaKnown RBP28.96■■■□□ 2.23
MEIS3-201ENST00000331559 G2E3Q7L622 706 aa28.96■■■□□ 2.23
MEIS3-201ENST00000331559 AMOTQ4VCS5 1084 aa28.95■■■□□ 2.22
MEIS3-201ENST00000331559 PLEKHO1Q53GL0 409 aaPredicted RBP28.95■■■□□ 2.22
MEIS3-201ENST00000331559 CEP85Q6P2H3 762 aa28.95■■■□□ 2.22
MEIS3-201ENST00000331559 C22orf23Q9BZE7 217 aa28.95■■■□□ 2.22
MEIS3-201ENST00000331559 LMO7Q8WWI1 1683 aa28.94■■■□□ 2.22
MEIS3-201ENST00000331559 LMOD2Q6P5Q4 547 aa28.94■■■□□ 2.22
MEIS3-201ENST00000331559 CACNA1FO60840 1977 aa28.93■■■□□ 2.22
MEIS3-201ENST00000331559 AKAP4Q5JQC9 854 aa28.93■■■□□ 2.22
MEIS3-201ENST00000331559 CHMP4AQ9BY43 222 aa28.93■■■□□ 2.22
MEIS3-201ENST00000331559 CAMTA1Q9Y6Y1 1673 aa28.93■■■□□ 2.22
MEIS3-201ENST00000331559 ATF3P18847 181 aa28.93■■■□□ 2.22
MEIS3-201ENST00000331559 MEIS3Q99687 375 aa28.93■■■□□ 2.22
MEIS3-201ENST00000331559 FLIIQ13045 1269 aa28.92■■■□□ 2.22
MEIS3-201ENST00000331559 RGPD2P0DJD1 1756 aa28.91■■■□□ 2.22
MEIS3-201ENST00000331559 ALS2Q96Q42 1657 aa28.91■■■□□ 2.22
MEIS3-201ENST00000331559 ANKRD24Q8TF21 1146 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms