RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 ZBTB7BO15156 539 aaPredicted RBP22.17■■□□□ 1.14
SOCS3-201ENST00000330871 PLCB2Q00722 1185 aa22.17■■□□□ 1.14
SOCS3-201ENST00000330871 COL3A1P02461 1466 aaPredicted RBP22.16■■□□□ 1.14
SOCS3-201ENST00000330871 GADD45BO75293 160 aaPredicted RBP22.16■■□□□ 1.14
SOCS3-201ENST00000330871 PDIA4P13667 645 aaKnown RBP22.16■■□□□ 1.14
SOCS3-201ENST00000330871 SPTLC3Q9NUV7 552 aa22.16■■□□□ 1.14
SOCS3-201ENST00000330871 C16orf71Q8IYS4 520 aaPredicted RBP22.15■■□□□ 1.14
SOCS3-201ENST00000330871 ARHGEF28Q8N1W1 1705 aaKnown RBP22.15■■□□□ 1.14
SOCS3-201ENST00000330871 PLEKHM2Q8IWE5 1019 aa22.15■■□□□ 1.14
SOCS3-201ENST00000330871 SRPK2P78362 688 aaKnown RBP22.14■■□□□ 1.13
SOCS3-201ENST00000330871 SAFB2Q14151 953 aaKnown RBP eCLIP22.14■■□□□ 1.13
SOCS3-201ENST00000330871 NUTM2DQ5VT03 806 aaPredicted RBP22.14■■□□□ 1.13
SOCS3-201ENST00000330871 ANKRD7Q92527 254 aa22.14■■□□□ 1.13
SOCS3-201ENST00000330871 DIAPH1O60610 1272 aaKnown RBP22.14■■□□□ 1.13
SOCS3-201ENST00000330871 ZNF428Q96B54 188 aa22.14■■□□□ 1.13
SOCS3-201ENST00000330871 FYB1O15117 783 aa22.13■■□□□ 1.13
SOCS3-201ENST00000330871 BRPF1P55201 1214 aaPredicted RBP22.13■■□□□ 1.13
SOCS3-201ENST00000330871 IPO4Q8TEX9 1081 aaKnown RBP22.13■■□□□ 1.13
SOCS3-201ENST00000330871 SMARCA5O60264 1052 aaPredicted RBP22.12■■□□□ 1.13
SOCS3-201ENST00000330871 TAF3Q5VWG9 929 aa22.12■■□□□ 1.13
SOCS3-201ENST00000330871 NOL8Q76FK4 1167 aaKnown RBP22.12■■□□□ 1.13
SOCS3-201ENST00000330871 SYAP1Q96A49 352 aaPredicted RBP22.12■■□□□ 1.13
SOCS3-201ENST00000330871 TERF2IPQ9NYB0 399 aa22.12■■□□□ 1.13
SOCS3-201ENST00000330871 CDK11BP21127 795 aaKnown RBP22.12■■□□□ 1.13
SOCS3-201ENST00000330871 PYCARDQ9ULZ3 195 aa22.12■■□□□ 1.13
SOCS3-201ENST00000330871 HCLS1P14317 486 aaPredicted RBP22.11■■□□□ 1.13
SOCS3-201ENST00000330871 CHAF1AQ13111 956 aaPredicted RBP22.11■■□□□ 1.13
SOCS3-201ENST00000330871 OTUD7AQ8TE49 926 aaPredicted RBP22.1■■□□□ 1.13
SOCS3-201ENST00000330871 TTC22Q5TAA0 569 aa22.1■■□□□ 1.13
SOCS3-201ENST00000330871 DIAPH3Q9NSV4 1193 aa22.1■■□□□ 1.13
SOCS3-201ENST00000330871 MED14O60244 1454 aa22.1■■□□□ 1.13
SOCS3-201ENST00000330871 INTS3Q68E01 1043 aaKnown RBP22.09■■□□□ 1.13
SOCS3-201ENST00000330871 FCHSD2O94868 740 aa22.09■■□□□ 1.13
SOCS3-201ENST00000330871 BRD1O95696 1058 aa22.08■■□□□ 1.13
SOCS3-201ENST00000330871 KCNJ4P48050 445 aa22.08■■□□□ 1.13
SOCS3-201ENST00000330871 OSCARQ8IYS5 282 aa22.08■■□□□ 1.13
SOCS3-201ENST00000330871 TMX3Q96JJ7 454 aa22.08■■□□□ 1.13
SOCS3-201ENST00000330871 PNPLA6Q8IY17 1366 aa22.08■■□□□ 1.13
SOCS3-201ENST00000330871 ATAD2Q6PL18 1390 aa22.08■■□□□ 1.13
SOCS3-201ENST00000330871 OGFRQ9NZT2 677 aa22.08■■□□□ 1.12
SOCS3-201ENST00000330871 ASXL2Q76L83 1435 aa22.07■■□□□ 1.12
SOCS3-201ENST00000330871 APBB1O00213 710 aa22.07■■□□□ 1.12
SOCS3-201ENST00000330871 NEK4P51957 841 aa22.07■■□□□ 1.12
SOCS3-201ENST00000330871 KIAA1524Q8TCG1 905 aa22.07■■□□□ 1.12
SOCS3-201ENST00000330871 KCNF1Q9H3M0 494 aa22.07■■□□□ 1.12
SOCS3-201ENST00000330871 PHF14O94880 888 aa22.07■■□□□ 1.12
SOCS3-201ENST00000330871 IRX5P78411 483 aaPredicted RBP22.07■■□□□ 1.12
SOCS3-201ENST00000330871 UVSSAQ2YD98 709 aa22.07■■□□□ 1.12
SOCS3-201ENST00000330871 SPC24Q8NBT2 197 aa22.07■■□□□ 1.12
SOCS3-201ENST00000330871 ARHGAP45Q92619 1136 aa22.07■■□□□ 1.12
SOCS3-201ENST00000330871 FEZ1Q99689 392 aa22.07■■□□□ 1.12
SOCS3-201ENST00000330871 STK26Q9P289 416 aa22.07■■□□□ 1.12
SOCS3-201ENST00000330871 USP48Q86UV5 1035 aa22.06■■□□□ 1.12
SOCS3-201ENST00000330871 NEXMIFQ5QGS0 1516 aa22.06■■□□□ 1.12
SOCS3-201ENST00000330871 SDSP20132 328 aa22.06■■□□□ 1.12
SOCS3-201ENST00000330871 NCBP1Q09161 790 aaKnown RBP22.06■■□□□ 1.12
SOCS3-201ENST00000330871 FAM184AQ8NB25 1140 aa22.06■■□□□ 1.12
SOCS3-201ENST00000330871 CAMSAP1Q5T5Y3 1602 aa22.05■■□□□ 1.12
SOCS3-201ENST00000330871 HECW2Q9P2P5 1572 aa22.05■■□□□ 1.12
SOCS3-201ENST00000330871 CTIFO43310 598 aaKnown RBP22.05■■□□□ 1.12
SOCS3-201ENST00000330871 ABCC3O15438 1527 aa22.05■■□□□ 1.12
SOCS3-201ENST00000330871 ELL2O00472 640 aaPredicted RBP22.05■■□□□ 1.12
SOCS3-201ENST00000330871 NAA30Q147X3 362 aaPredicted RBP22.05■■□□□ 1.12
SOCS3-201ENST00000330871 FRMPD1Q5SYB0 1578 aa22.04■■□□□ 1.12
SOCS3-201ENST00000330871 MLH3Q9UHC1 1453 aa22.04■■□□□ 1.12
SOCS3-201ENST00000330871 VAMP4O75379 141 aa22.03■■□□□ 1.12
SOCS3-201ENST00000330871 SLFN14P0C7P3 912 aa22.03■■□□□ 1.12
SOCS3-201ENST00000330871 AP5Z1O43299 807 aa22.03■■□□□ 1.12
SOCS3-201ENST00000330871 HDGFL2Q7Z4V5 671 aaPredicted RBP22.03■■□□□ 1.12
SOCS3-201ENST00000330871 MRPL50Q8N5N7 158 aaKnown RBP22.03■■□□□ 1.12
SOCS3-201ENST00000330871 KDM4AO75164 1064 aa22.02■■□□□ 1.12
SOCS3-201ENST00000330871 CTNNA3Q9UI47 895 aa22.02■■□□□ 1.12
SOCS3-201ENST00000330871 PIK3R4Q99570 1358 aa22.02■■□□□ 1.12
SOCS3-201ENST00000330871 PRKAR2BP31323 418 aa22.02■■□□□ 1.12
SOCS3-201ENST00000330871 ANKRD26Q9UPS8 1709 aa22.02■■□□□ 1.11
SOCS3-201ENST00000330871 PIK3C2BO00750 1634 aa22.01■■□□□ 1.11
SOCS3-201ENST00000330871 ZFYVE9O95405 1425 aa22.01■■□□□ 1.11
SOCS3-201ENST00000330871 MINK1Q8N4C8 1332 aaPredicted RBP22.01■■□□□ 1.11
SOCS3-201ENST00000330871 CD163L1Q9NR16 1453 aa22.01■■□□□ 1.11
SOCS3-201ENST00000330871 POGZQ7Z3K3 1410 aa22■■□□□ 1.11
SOCS3-201ENST00000330871 CASC1Q6TDU7 716 aa22■■□□□ 1.11
SOCS3-201ENST00000330871 GABPB1Q06547 395 aaPredicted RBP22■■□□□ 1.11
SOCS3-201ENST00000330871 PTCH1Q13635 1447 aa22■■□□□ 1.11
SOCS3-201ENST00000330871 IDI1Q13907 227 aa21.99■■□□□ 1.11
SOCS3-201ENST00000330871 TSPYL6Q8N831 410 aa21.99■■□□□ 1.11
SOCS3-201ENST00000330871 FAM135BQ49AJ0 1406 aa21.98■■□□□ 1.11
SOCS3-201ENST00000330871 REC8O95072 547 aa21.98■■□□□ 1.11
SOCS3-201ENST00000330871 CFAP44Q96MT7 982 aa21.98■■□□□ 1.11
SOCS3-201ENST00000330871 PRAM1Q96QH2 718 aa21.98■■□□□ 1.11
SOCS3-201ENST00000330871 NFE2L2Q16236 605 aa21.98■■□□□ 1.11
SOCS3-201ENST00000330871 CCDC183Q5T5S1 534 aa21.98■■□□□ 1.11
SOCS3-201ENST00000330871 GNAI1P63096 354 aa21.97■■□□□ 1.11
SOCS3-201ENST00000330871 SIGLEC1Q9BZZ2 1709 aa21.97■■□□□ 1.11
SOCS3-201ENST00000330871 LRRC7Q96NW7 1537 aa21.97■■□□□ 1.11
SOCS3-201ENST00000330871 ERICH4A6NGS2 130 aa21.97■■□□□ 1.11
SOCS3-201ENST00000330871 CDC42BPGQ6DT37 1551 aa21.96■■□□□ 1.11
SOCS3-201ENST00000330871 C16orf45Q96MC5 204 aaPredicted RBP21.96■■□□□ 1.11
SOCS3-201ENST00000330871 THUMPD2Q9BTF0 503 aaKnown RBP21.96■■□□□ 1.11
SOCS3-201ENST00000330871 DDX41Q9UJV9 622 aaKnown RBP21.96■■□□□ 1.11
SOCS3-201ENST00000330871 ABCC4O15439 1325 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms