RNA–Protein interactions for RNA: ENST00000329410.3

C16orf54-201, Transcript of chromosome 16 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C16orf54, Length 2,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C16orf54-201ENST00000329410 CHL1O00533 1208 aa19.55■□□□□ 0.72
C16orf54-201ENST00000329410 NLRP6P59044 892 aa19.55■□□□□ 0.72
C16orf54-201ENST00000329410 BECN1Q14457 450 aa19.55■□□□□ 0.72
C16orf54-201ENST00000329410 MTHFSDQ2M296 383 aaKnown RBP19.55■□□□□ 0.72
C16orf54-201ENST00000329410 TTC21AQ8NDW8 1320 aa19.55■□□□□ 0.72
C16orf54-201ENST00000329410 API5Q9BZZ5 524 aaKnown RBP19.54■□□□□ 0.72
C16orf54-201ENST00000329410 HSP90AA2PQ14568 343 aaPredicted RBP19.53■□□□□ 0.72
C16orf54-201ENST00000329410 SPRYD3Q8NCJ5 442 aa19.53■□□□□ 0.72
C16orf54-201ENST00000329410 EYA1Q99502 592 aa19.53■□□□□ 0.72
C16orf54-201ENST00000329410 TBC1D2Q9BYX2 928 aa19.53■□□□□ 0.72
C16orf54-201ENST00000329410 C22orf23Q9BZE7 217 aa19.53■□□□□ 0.72
C16orf54-201ENST00000329410 RRP9O43818 475 aaKnown RBP19.52■□□□□ 0.72
C16orf54-201ENST00000329410 RGPD1P0DJD0 1748 aa19.52■□□□□ 0.72
C16orf54-201ENST00000329410 FLT4P35916 1363 aa19.52■□□□□ 0.72
C16orf54-201ENST00000329410 C14orf37Q86TY3 774 aa19.51■□□□□ 0.71
C16orf54-201ENST00000329410 LTV1Q96GA3 475 aaPredicted RBP19.51■□□□□ 0.71
C16orf54-201ENST00000329410 CHMP4BQ9H444 224 aaKnown RBP19.51■□□□□ 0.71
C16orf54-201ENST00000329410 PODXL2Q9NZ53 605 aa19.51■□□□□ 0.71
C16orf54-201ENST00000329410 SBNO1A3KN83 1393 aa19.51■□□□□ 0.71
C16orf54-201ENST00000329410 GCC1Q96CN9 775 aa19.5■□□□□ 0.71
C16orf54-201ENST00000329410 RTF1Q92541 710 aaKnown RBP19.49■□□□□ 0.71
C16orf54-201ENST00000329410 PIK3C2AO00443 1686 aa19.49■□□□□ 0.71
C16orf54-201ENST00000329410 ABTB2Q8N961 1025 aa19.49■□□□□ 0.71
C16orf54-201ENST00000329410 CRB1P82279 1406 aa19.49■□□□□ 0.71
C16orf54-201ENST00000329410 CEP170BQ9Y4F5 1589 aaPredicted RBP19.49■□□□□ 0.71
C16orf54-201ENST00000329410 ARHGEF10O15013 1369 aa19.49■□□□□ 0.71
C16orf54-201ENST00000329410 FMN2Q9NZ56 1722 aa19.48■□□□□ 0.71
C16orf54-201ENST00000329410 SLC4A2P04920 1241 aa19.48■□□□□ 0.71
C16orf54-201ENST00000329410 TSPYL4Q9UJ04 414 aa19.48■□□□□ 0.71
C16orf54-201ENST00000329410 HSP90AA1P07900 732 aaKnown RBP19.47■□□□□ 0.71
C16orf54-201ENST00000329410 NAP1L5Q96NT1 182 aaPredicted RBP19.47■□□□□ 0.71
C16orf54-201ENST00000329410 RGS12O14924 1447 aa19.46■□□□□ 0.71
C16orf54-201ENST00000329410 INTS3Q68E01 1043 aaKnown RBP19.46■□□□□ 0.71
C16orf54-201ENST00000329410 XRN1Q8IZH2 1706 aaKnown RBP19.46■□□□□ 0.71
C16orf54-201ENST00000329410 IGSF1Q8N6C5 1336 aa19.46■□□□□ 0.71
C16orf54-201ENST00000329410 G2E3Q7L622 706 aa19.45■□□□□ 0.7
C16orf54-201ENST00000329410 HOXC9P31274 260 aa19.45■□□□□ 0.7
C16orf54-201ENST00000329410 KIAA0232Q92628 1395 aa19.45■□□□□ 0.7
C16orf54-201ENST00000329410 PLEKHG5O94827 1062 aa19.44■□□□□ 0.7
C16orf54-201ENST00000329410 L1TD1Q5T7N2 865 aaKnown RBP19.44■□□□□ 0.7
C16orf54-201ENST00000329410 ANTXR1Q9H6X2 564 aa19.44■□□□□ 0.7
C16orf54-201ENST00000329410 KDRP35968 1356 aa19.44■□□□□ 0.7
C16orf54-201ENST00000329410 MSH6P52701 1360 aa19.44■□□□□ 0.7
C16orf54-201ENST00000329410 F6X3S4 739 aa19.44■□□□□ 0.7
C16orf54-201ENST00000329410 APBB1O00213 710 aa19.44■□□□□ 0.7
C16orf54-201ENST00000329410 BMP2KLQ5H9B9 411 aa19.44■□□□□ 0.7
C16orf54-201ENST00000329410 USHBP1Q8N6Y0 703 aa19.44■□□□□ 0.7
C16orf54-201ENST00000329410 SLC4A10Q6U841 1118 aa19.43■□□□□ 0.7
C16orf54-201ENST00000329410 NECTIN2Q92692 538 aa19.43■□□□□ 0.7
C16orf54-201ENST00000329410 MEIS3Q99687 375 aa19.43■□□□□ 0.7
C16orf54-201ENST00000329410 HAP1P54257 671 aaPredicted RBP19.42■□□□□ 0.7
C16orf54-201ENST00000329410 C16orf71Q8IYS4 520 aaPredicted RBP19.42■□□□□ 0.7
C16orf54-201ENST00000329410 SETD1BQ9UPS6 1966 aaKnown RBP19.42■□□□□ 0.7
C16orf54-201ENST00000329410 GAS2L2Q8NHY3 880 aa19.41■□□□□ 0.7
C16orf54-201ENST00000329410 ZBTB7CA1YPR0 619 aa19.41■□□□□ 0.7
C16orf54-201ENST00000329410 DCTPP1Q9H773 170 aa19.4■□□□□ 0.7
C16orf54-201ENST00000329410 ANKARQ7Z5J8 1434 aa19.4■□□□□ 0.7
C16orf54-201ENST00000329410 PHF8Q9UPP1 1060 aa19.4■□□□□ 0.7
C16orf54-201ENST00000329410 PTPRCP08575 1304 aa19.4■□□□□ 0.7
C16orf54-201ENST00000329410 CEP85Q6P2H3 762 aa19.39■□□□□ 0.7
C16orf54-201ENST00000329410 TBC1D9Q6ZT07 1266 aa19.39■□□□□ 0.7
C16orf54-201ENST00000329410 ATP10DQ9P241 1426 aa19.39■□□□□ 0.69
C16orf54-201ENST00000329410 ANKRD44Q8N8A2 993 aa19.39■□□□□ 0.69
C16orf54-201ENST00000329410 OTUD7AQ8TE49 926 aaPredicted RBP19.39■□□□□ 0.69
C16orf54-201ENST00000329410 SMARCA5O60264 1052 aaPredicted RBP19.39■□□□□ 0.69
C16orf54-201ENST00000329410 ANKLE2Q86XL3 938 aa19.39■□□□□ 0.69
C16orf54-201ENST00000329410 KIF24Q5T7B8 1368 aa19.38■□□□□ 0.69
C16orf54-201ENST00000329410 MARF1Q9Y4F3 1742 aaKnown RBP19.38■□□□□ 0.69
C16orf54-201ENST00000329410 RTL1A6NKG5 1358 aa19.38■□□□□ 0.69
C16orf54-201ENST00000329410 GNAT3A8MTJ3 354 aa19.38■□□□□ 0.69
C16orf54-201ENST00000329410 GSPT1P15170 499 aaKnown RBP19.38■□□□□ 0.69
C16orf54-201ENST00000329410 CLCN1P35523 988 aa19.38■□□□□ 0.69
C16orf54-201ENST00000329410 PLEKHM2Q8IWE5 1019 aa19.38■□□□□ 0.69
C16orf54-201ENST00000329410 IL17REQ8NFR9 667 aa19.38■□□□□ 0.69
C16orf54-201ENST00000329410 ESCO1Q5FWF5 840 aa19.37■□□□□ 0.69
C16orf54-201ENST00000329410 RBM25P49756 843 aaKnown RBP19.36■□□□□ 0.69
C16orf54-201ENST00000329410 XPCQ01831 940 aaPredicted RBP19.35■□□□□ 0.69
C16orf54-201ENST00000329410 RPAP2Q8IXW5 612 aaPredicted RBP19.35■□□□□ 0.69
C16orf54-201ENST00000329410 NWD1Q149M9 1564 aa19.34■□□□□ 0.69
C16orf54-201ENST00000329410 PSME1Q06323 249 aa19.34■□□□□ 0.69
C16orf54-201ENST00000329410 HSCBQ8IWL3 235 aa19.34■□□□□ 0.69
C16orf54-201ENST00000329410 STK31Q9BXU1 1019 aa19.34■□□□□ 0.69
C16orf54-201ENST00000329410 FKBP5Q13451 457 aaPredicted RBP19.33■□□□□ 0.68
C16orf54-201ENST00000329410 KIF2CQ99661 725 aa19.33■□□□□ 0.68
C16orf54-201ENST00000329410 RBM42Q9BTD8 480 aaKnown RBP19.32■□□□□ 0.68
C16orf54-201ENST00000329410 CHD2O14647 1828 aaKnown RBP19.32■□□□□ 0.68
C16orf54-201ENST00000329410 MAP3K5Q99683 1374 aa19.32■□□□□ 0.68
C16orf54-201ENST00000329410 NBPF6Q5VWK0 638 aa19.32■□□□□ 0.68
C16orf54-201ENST00000329410 NBPF4Q96M43 638 aa19.32■□□□□ 0.68
C16orf54-201ENST00000329410 FLIIQ13045 1269 aa19.31■□□□□ 0.68
C16orf54-201ENST00000329410 HTATSF1O43719 755 aaKnown RBP19.31■□□□□ 0.68
C16orf54-201ENST00000329410 CDC45O75419 566 aa19.31■□□□□ 0.68
C16orf54-201ENST00000329410 TTC22Q5TAA0 569 aa19.31■□□□□ 0.68
C16orf54-201ENST00000329410 CD2BP2O95400 341 aaKnown RBP19.3■□□□□ 0.68
C16orf54-201ENST00000329410 TAF7Q15545 349 aaPredicted RBP19.3■□□□□ 0.68
C16orf54-201ENST00000329410 CCDC30Q5VVM6 783 aa19.3■□□□□ 0.68
C16orf54-201ENST00000329410 LRRC59Q96AG4 307 aaKnown RBP19.3■□□□□ 0.68
C16orf54-201ENST00000329410 ORAI2Q96SN7 254 aa19.3■□□□□ 0.68
C16orf54-201ENST00000329410 LTN1O94822 1766 aa19.3■□□□□ 0.68
C16orf54-201ENST00000329410 CCT4P50991 539 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms