RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 MSH6P52701 1360 aa20.25■□□□□ 0.83
PGBD2-201ENST00000329291 USHBP1Q8N6Y0 703 aa20.24■□□□□ 0.83
PGBD2-201ENST00000329291 IP6K1Q92551 441 aa20.24■□□□□ 0.83
PGBD2-201ENST00000329291 DDX19BQ9UMR2 479 aa20.23■□□□□ 0.83
PGBD2-201ENST00000329291 NFAT5O94916 1531 aa20.23■□□□□ 0.83
PGBD2-201ENST00000329291 ZBTB7CA1YPR0 619 aa20.22■□□□□ 0.83
PGBD2-201ENST00000329291 ZBTB40Q9NUA8 1239 aa20.22■□□□□ 0.83
PGBD2-201ENST00000329291 LMOD2Q6P5Q4 547 aa20.21■□□□□ 0.83
PGBD2-201ENST00000329291 TRPM3Q9HCF6 1732 aaPredicted RBP20.21■□□□□ 0.83
PGBD2-201ENST00000329291 LTN1O94822 1766 aa20.2■□□□□ 0.82
PGBD2-201ENST00000329291 NBPF6Q5VWK0 638 aa20.2■□□□□ 0.82
PGBD2-201ENST00000329291 ARHGAP45Q92619 1136 aa20.2■□□□□ 0.82
PGBD2-201ENST00000329291 NBPF4Q96M43 638 aa20.2■□□□□ 0.82
PGBD2-201ENST00000329291 RWDD1Q9H446 243 aaPredicted RBP20.2■□□□□ 0.82
PGBD2-201ENST00000329291 GCP02774 474 aa20.2■□□□□ 0.82
PGBD2-201ENST00000329291 C8orf34Q49A92 452 aa20.2■□□□□ 0.82
PGBD2-201ENST00000329291 GAS2L2Q8NHY3 880 aa20.2■□□□□ 0.82
PGBD2-201ENST00000329291 RTF1Q92541 710 aaKnown RBP20.2■□□□□ 0.82
PGBD2-201ENST00000329291 NPM2Q86SE8 214 aaKnown RBP20.19■□□□□ 0.82
PGBD2-201ENST00000329291 DDX17Q92841 729 aaKnown RBP20.19■□□□□ 0.82
PGBD2-201ENST00000329291 PDZRN3Q9UPQ7 1066 aa20.18■□□□□ 0.82
PGBD2-201ENST00000329291 SLIT3O75094 1523 aa20.18■□□□□ 0.82
PGBD2-201ENST00000329291 USP19O94966 1318 aa20.17■□□□□ 0.82
PGBD2-201ENST00000329291 ARHGEF25Q86VW2 580 aa20.17■□□□□ 0.82
PGBD2-201ENST00000329291 IL17REQ8NFR9 667 aa20.17■□□□□ 0.82
PGBD2-201ENST00000329291 LRRC59Q96AG4 307 aaKnown RBP20.17■□□□□ 0.82
PGBD2-201ENST00000329291 NPHP3Q7Z494 1330 aa20.16■□□□□ 0.82
PGBD2-201ENST00000329291 ZBTB7BO15156 539 aaPredicted RBP20.16■□□□□ 0.82
PGBD2-201ENST00000329291 FAM161AQ3B820 660 aa20.16■□□□□ 0.82
PGBD2-201ENST00000329291 PHRF1Q9P1Y6 1649 aaKnown RBP20.16■□□□□ 0.82
PGBD2-201ENST00000329291 KIAA0232Q92628 1395 aa20.16■□□□□ 0.82
PGBD2-201ENST00000329291 GNAT3A8MTJ3 354 aa20.15■□□□□ 0.82
PGBD2-201ENST00000329291 ANP32AP39687 249 aaKnown RBP20.15■□□□□ 0.82
PGBD2-201ENST00000329291 TSPYL4Q9UJ04 414 aa20.15■□□□□ 0.82
PGBD2-201ENST00000329291 ABCC4O15439 1325 aa20.15■□□□□ 0.82
PGBD2-201ENST00000329291 HDAC1Q13547 482 aaPredicted RBP20.15■□□□□ 0.82
PGBD2-201ENST00000329291 ZNF335Q9H4Z2 1342 aaPredicted RBP20.14■□□□□ 0.82
PGBD2-201ENST00000329291 HTATSF1O43719 755 aaKnown RBP20.14■□□□□ 0.81
PGBD2-201ENST00000329291 XIRP1Q702N8 1843 aaKnown RBP20.14■□□□□ 0.81
PGBD2-201ENST00000329291 AXIN2Q9Y2T1 843 aa20.14■□□□□ 0.81
PGBD2-201ENST00000329291 ALS2Q96Q42 1657 aa20.13■□□□□ 0.81
PGBD2-201ENST00000329291 IPO9Q96P70 1041 aaKnown RBP20.13■□□□□ 0.81
PGBD2-201ENST00000329291 C1orf115Q9H7X2 142 aa20.11■□□□□ 0.81
PGBD2-201ENST00000329291 MAP3K5Q99683 1374 aa20.11■□□□□ 0.81
PGBD2-201ENST00000329291 API5Q9BZZ5 524 aaKnown RBP20.1■□□□□ 0.81
PGBD2-201ENST00000329291 RGS12O14924 1447 aa20.08■□□□□ 0.81
PGBD2-201ENST00000329291 TNS3Q68CZ2 1445 aa20.08■□□□□ 0.81
PGBD2-201ENST00000329291 SLC4A2P04920 1241 aa20.08■□□□□ 0.81
PGBD2-201ENST00000329291 SMC5Q8IY18 1101 aa20.08■□□□□ 0.81
PGBD2-201ENST00000329291 ANP32EQ9BTT0 268 aa20.08■□□□□ 0.81
PGBD2-201ENST00000329291 ZC3H6P61129 1189 aaKnown RBP20.08■□□□□ 0.8
PGBD2-201ENST00000329291 G2E3Q7L622 706 aa20.08■□□□□ 0.8
PGBD2-201ENST00000329291 ANKRD24Q8TF21 1146 aa20.08■□□□□ 0.8
PGBD2-201ENST00000329291 LGR6Q9HBX8 967 aa20.08■□□□□ 0.8
PGBD2-201ENST00000329291 RGPD2P0DJD1 1756 aa20.08■□□□□ 0.8
PGBD2-201ENST00000329291 SIRT2Q8IXJ6 389 aa20.07■□□□□ 0.8
PGBD2-201ENST00000329291 PXDNQ92626 1479 aa20.07■□□□□ 0.8
PGBD2-201ENST00000329291 TAF7Q15545 349 aaPredicted RBP20.06■□□□□ 0.8
PGBD2-201ENST00000329291 BRINP3Q76B58 766 aa20.06■□□□□ 0.8
PGBD2-201ENST00000329291 MED1Q15648 1581 aaPredicted RBP20.06■□□□□ 0.8
PGBD2-201ENST00000329291 HAP1P54257 671 aaPredicted RBP20.06■□□□□ 0.8
PGBD2-201ENST00000329291 LRRC37A3O60309 1634 aa20.05■□□□□ 0.8
PGBD2-201ENST00000329291 INTS3Q68E01 1043 aaKnown RBP20.05■□□□□ 0.8
PGBD2-201ENST00000329291 SLAIN2Q9P270 581 aa20.05■□□□□ 0.8
PGBD2-201ENST00000329291 NOP58Q9Y2X3 529 aaKnown RBP20.05■□□□□ 0.8
PGBD2-201ENST00000329291 SEC24BO95487 1268 aa20.05■□□□□ 0.8
PGBD2-201ENST00000329291 CABLES1Q8TDN4 633 aa20.05■□□□□ 0.8
PGBD2-201ENST00000329291 SPATA31A3Q5VYP0 1347 aa20.05■□□□□ 0.8
PGBD2-201ENST00000329291 CEMIPQ8WUJ3 1361 aa20.02■□□□□ 0.8
PGBD2-201ENST00000329291 NECTIN2Q92692 538 aa20.02■□□□□ 0.8
PGBD2-201ENST00000329291 PTPRCP08575 1304 aa20.01■□□□□ 0.79
PGBD2-201ENST00000329291 NUCB1Q02818 461 aa20.01■□□□□ 0.79
PGBD2-201ENST00000329291 NCAPD2Q15021 1401 aa20.01■□□□□ 0.79
PGBD2-201ENST00000329291 ZNF530Q6P9A1 599 aaPredicted RBP20■□□□□ 0.79
PGBD2-201ENST00000329291 MPRIPQ6WCQ1 1025 aa20■□□□□ 0.79
PGBD2-201ENST00000329291 CHMP4BQ9H444 224 aaKnown RBP20■□□□□ 0.79
PGBD2-201ENST00000329291 ZBTB47Q9UFB7 747 aaPredicted RBP20■□□□□ 0.79
PGBD2-201ENST00000329291 F6X3S4 739 aa20■□□□□ 0.79
PGBD2-201ENST00000329291 PLEKHO1Q53GL0 409 aaPredicted RBP20■□□□□ 0.79
PGBD2-201ENST00000329291 ERICH6Q7L0X2 663 aa19.99■□□□□ 0.79
PGBD2-201ENST00000329291 BABAM1Q9NWV8 329 aa19.99■□□□□ 0.79
PGBD2-201ENST00000329291 KCNQ3O43525 872 aa19.99■□□□□ 0.79
PGBD2-201ENST00000329291 AKAP4Q5JQC9 854 aa19.99■□□□□ 0.79
PGBD2-201ENST00000329291 ERBB3P21860 1342 aa19.98■□□□□ 0.79
PGBD2-201ENST00000329291 AMOTQ4VCS5 1084 aa19.97■□□□□ 0.79
PGBD2-201ENST00000329291 LNPKQ9C0E8 428 aa19.97■□□□□ 0.79
PGBD2-201ENST00000329291 SOS2Q07890 1332 aaPredicted RBP19.97■□□□□ 0.79
PGBD2-201ENST00000329291 CAMTA1Q9Y6Y1 1673 aa19.97■□□□□ 0.79
PGBD2-201ENST00000329291 RGPD5Q99666 1765 aa19.96■□□□□ 0.79
PGBD2-201ENST00000329291 CCDC30Q5VVM6 783 aa19.96■□□□□ 0.79
PGBD2-201ENST00000329291 CHD1LQ86WJ1 897 aa19.96■□□□□ 0.79
PGBD2-201ENST00000329291 MEIS3Q99687 375 aa19.96■□□□□ 0.79
PGBD2-201ENST00000329291 CHRNA2Q15822 529 aa19.96■□□□□ 0.79
PGBD2-201ENST00000329291 STK31Q9BXU1 1019 aa19.96■□□□□ 0.79
PGBD2-201ENST00000329291 ABCC6O95255 1503 aa19.96■□□□□ 0.79
PGBD2-201ENST00000329291 EIF4A1P60842 406 aaKnown RBP19.95■□□□□ 0.78
PGBD2-201ENST00000329291 SLC4A10Q6U841 1118 aa19.95■□□□□ 0.78
PGBD2-201ENST00000329291 CRYBG1Q9Y4K1 1723 aa19.95■□□□□ 0.78
PGBD2-201ENST00000329291 RNMTO43148 476 aaKnown RBP19.94■□□□□ 0.78
PGBD2-201ENST00000329291 ANKRD45Q5TZF3 282 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms