RNA–Protein interactions for RNA: ENST00000328913.7

MCF2L2-201, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene MCF2L2, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-201ENST00000328913 SRGAP3O43295 1099 aa18.82■□□□□ 0.6
MCF2L2-201ENST00000328913 CABP4P57796 275 aa18.82■□□□□ 0.6
MCF2L2-201ENST00000328913 TBC1D2BQ9UPU7 963 aa18.82■□□□□ 0.6
MCF2L2-201ENST00000328913 SPG7Q9UQ90 795 aa18.82■□□□□ 0.6
MCF2L2-201ENST00000328913 MAP4K4O95819 1239 aaPredicted RBP18.82■□□□□ 0.6
MCF2L2-201ENST00000328913 RPRD2Q5VT52 1461 aaKnown RBP18.82■□□□□ 0.6
MCF2L2-201ENST00000328913 CEP57L1Q8IYX8 460 aa18.82■□□□□ 0.6
MCF2L2-201ENST00000328913 LEKR1Q6ZMV7 388 aa18.82■□□□□ 0.6
MCF2L2-201ENST00000328913 IL1RAPL2Q9NP60 686 aa18.82■□□□□ 0.6
MCF2L2-201ENST00000328913 SSFA2P28290 1259 aa18.81■□□□□ 0.6
MCF2L2-201ENST00000328913 MAP3K11Q16584 847 aa18.81■□□□□ 0.6
MCF2L2-201ENST00000328913 PDCL2Q8N4E4 241 aa18.81■□□□□ 0.6
MCF2L2-201ENST00000328913 TBC1D32Q96NH3 1257 aa18.81■□□□□ 0.6
MCF2L2-201ENST00000328913 PATL2C9JE40 543 aaKnown RBP18.81■□□□□ 0.6
MCF2L2-201ENST00000328913 ZC3H6P61129 1189 aaKnown RBP18.81■□□□□ 0.6
MCF2L2-201ENST00000328913 KIF6Q6ZMV9 814 aa18.81■□□□□ 0.6
MCF2L2-201ENST00000328913 PTPN23Q9H3S7 1636 aa18.81■□□□□ 0.6
MCF2L2-201ENST00000328913 OFD1O75665 1012 aa18.81■□□□□ 0.6
MCF2L2-201ENST00000328913 PIP4K2AP48426 406 aaPredicted RBP18.81■□□□□ 0.6
MCF2L2-201ENST00000328913 CWC27Q6UX04 472 aaKnown RBP18.81■□□□□ 0.6
MCF2L2-201ENST00000328913 FILIP1Q7Z7B0 1213 aa18.8■□□□□ 0.6
MCF2L2-201ENST00000328913 CEBPAP49715 358 aaPredicted RBP18.8■□□□□ 0.6
MCF2L2-201ENST00000328913 H0YHG0 523 aa18.8■□□□□ 0.6
MCF2L2-201ENST00000328913 EXOC6BQ9Y2D4 811 aa18.8■□□□□ 0.6
MCF2L2-201ENST00000328913 UPF3BQ9BZI7 483 aaKnown RBP18.79■□□□□ 0.6
MCF2L2-201ENST00000328913 KLHL34Q8N239 644 aa18.79■□□□□ 0.6
MCF2L2-201ENST00000328913 KRT32Q14532 448 aa18.79■□□□□ 0.6
MCF2L2-201ENST00000328913 DENND4BO75064 1496 aaPredicted RBP18.79■□□□□ 0.6
MCF2L2-201ENST00000328913 KDM4AO75164 1064 aa18.78■□□□□ 0.6
MCF2L2-201ENST00000328913 ADGRF5Q8IZF2 1346 aa18.78■□□□□ 0.6
MCF2L2-201ENST00000328913 FANCAO15360 1455 aa18.78■□□□□ 0.6
MCF2L2-201ENST00000328913 CBFA2T2O43439 604 aa18.78■□□□□ 0.6
MCF2L2-201ENST00000328913 BRPF1P55201 1214 aaPredicted RBP18.78■□□□□ 0.6
MCF2L2-201ENST00000328913 PHF23Q9BUL5 403 aaPredicted RBP18.78■□□□□ 0.6
MCF2L2-201ENST00000328913 CCDC183Q5T5S1 534 aa18.77■□□□□ 0.6
MCF2L2-201ENST00000328913 AACSQ86V21 672 aa18.77■□□□□ 0.6
MCF2L2-201ENST00000328913 PDCL3Q9H2J4 239 aa18.77■□□□□ 0.6
MCF2L2-201ENST00000328913 MX1P20591 662 aa18.77■□□□□ 0.6
MCF2L2-201ENST00000328913 DACH1Q9UI36 760 aa18.77■□□□□ 0.6
MCF2L2-201ENST00000328913 TRIM27P14373 513 aa18.77■□□□□ 0.59
MCF2L2-201ENST00000328913 BMP2KLQ5H9B9 411 aa18.77■□□□□ 0.59
MCF2L2-201ENST00000328913 SIL1Q9H173 461 aa18.77■□□□□ 0.59
MCF2L2-201ENST00000328913 PPFIBP1Q86W92 1011 aa18.76■□□□□ 0.59
MCF2L2-201ENST00000328913 KCNH5Q8NCM2 988 aa18.76■□□□□ 0.59
MCF2L2-201ENST00000328913 IGHDP01880 384 aa18.76■□□□□ 0.59
MCF2L2-201ENST00000328913 THUMPD2Q9BTF0 503 aaKnown RBP18.76■□□□□ 0.59
MCF2L2-201ENST00000328913 CASTP20810 708 aaKnown RBP18.76■□□□□ 0.59
MCF2L2-201ENST00000328913 TXLNAP40222 546 aa18.76■□□□□ 0.59
MCF2L2-201ENST00000328913 CCDC158Q5M9N0 1113 aa18.76■□□□□ 0.59
MCF2L2-201ENST00000328913 AMOTL2Q9Y2J4 779 aa18.75■□□□□ 0.59
MCF2L2-201ENST00000328913 DHX29Q7Z478 1369 aaKnown RBP18.75■□□□□ 0.59
MCF2L2-201ENST00000328913 PIP4K2BP78356 416 aa18.75■□□□□ 0.59
MCF2L2-201ENST00000328913 ERLIN1O75477 346 aa18.75■□□□□ 0.59
MCF2L2-201ENST00000328913 AXDND1Q5T1B0 1012 aaPredicted RBP18.75■□□□□ 0.59
MCF2L2-201ENST00000328913 KIF2AO00139 706 aaPredicted RBP18.74■□□□□ 0.59
MCF2L2-201ENST00000328913 MCM5P33992 734 aa18.74■□□□□ 0.59
MCF2L2-201ENST00000328913 MAGEC2Q9UBF1 373 aaPredicted RBP18.74■□□□□ 0.59
MCF2L2-201ENST00000328913 CTDP1Q9Y5B0 961 aaPredicted RBP18.74■□□□□ 0.59
MCF2L2-201ENST00000328913 PLEKHH1Q9ULM0 1364 aa18.74■□□□□ 0.59
MCF2L2-201ENST00000328913 KIF1BPQ96EK5 621 aa18.74■□□□□ 0.59
MCF2L2-201ENST00000328913 DCTN1Q14203 1278 aa18.73■□□□□ 0.59
MCF2L2-201ENST00000328913 FERMT3Q86UX7 667 aa18.73■□□□□ 0.59
MCF2L2-201ENST00000328913 TRIM22Q8IYM9 498 aa18.73■□□□□ 0.59
MCF2L2-201ENST00000328913 SCAND2PQ9GZW5 306 aaPredicted RBP18.73■□□□□ 0.59
MCF2L2-201ENST00000328913 EPS15P42566 896 aa18.73■□□□□ 0.59
MCF2L2-201ENST00000328913 KLHL40Q2TBA0 621 aa18.73■□□□□ 0.59
MCF2L2-201ENST00000328913 ZNHIT6Q9NWK9 470 aaKnown RBP18.73■□□□□ 0.59
MCF2L2-201ENST00000328913 SMARCA5O60264 1052 aaPredicted RBP18.73■□□□□ 0.59
MCF2L2-201ENST00000328913 GLRX3O76003 335 aaKnown RBP18.73■□□□□ 0.59
MCF2L2-201ENST00000328913 FYB1O15117 783 aa18.73■□□□□ 0.59
MCF2L2-201ENST00000328913 EIF3JO75822 258 aaKnown RBP18.73■□□□□ 0.59
MCF2L2-201ENST00000328913 FAM177A1Q8N128 213 aaPredicted RBP18.73■□□□□ 0.59
MCF2L2-201ENST00000328913 BAG4O95429 457 aaKnown RBP18.72■□□□□ 0.59
MCF2L2-201ENST00000328913 UBXN4Q92575 508 aa18.72■□□□□ 0.59
MCF2L2-201ENST00000328913 TCEAL9Q9UHQ7 104 aa18.72■□□□□ 0.59
MCF2L2-201ENST00000328913 NUTM1Q86Y26 1132 aa18.72■□□□□ 0.59
MCF2L2-201ENST00000328913 CCDC83Q8IWF9 413 aa18.72■□□□□ 0.59
MCF2L2-201ENST00000328913 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.72■□□□□ 0.59
MCF2L2-201ENST00000328913 SMTNL1A8MU46 457 aa18.72■□□□□ 0.59
MCF2L2-201ENST00000328913 RRP12Q5JTH9 1297 aaKnown RBP18.72■□□□□ 0.59
MCF2L2-201ENST00000328913 TBC1D9Q6ZT07 1266 aa18.71■□□□□ 0.59
MCF2L2-201ENST00000328913 MYL6BP14649 208 aa18.71■□□□□ 0.59
MCF2L2-201ENST00000328913 TTC39AQ5SRH9 613 aa18.71■□□□□ 0.59
MCF2L2-201ENST00000328913 SH2B1Q9NRF2 756 aaPredicted RBP18.71■□□□□ 0.59
MCF2L2-201ENST00000328913 FOXO3O43524 673 aa18.71■□□□□ 0.59
MCF2L2-201ENST00000328913 PHF8Q9UPP1 1060 aa18.71■□□□□ 0.59
MCF2L2-201ENST00000328913 RAB11FIP3O75154 756 aa18.71■□□□□ 0.59
MCF2L2-201ENST00000328913 PTPN14Q15678 1187 aa18.71■□□□□ 0.59
MCF2L2-201ENST00000328913 BTBD11A6QL63 1104 aa18.7■□□□□ 0.58
MCF2L2-201ENST00000328913 USP25Q9UHP3 1055 aa18.7■□□□□ 0.58
MCF2L2-201ENST00000328913 CAMK4Q16566 473 aa18.7■□□□□ 0.58
MCF2L2-201ENST00000328913 NME9Q86XW9 330 aa18.7■□□□□ 0.58
MCF2L2-201ENST00000328913 CTNNA3Q9UI47 895 aa18.7■□□□□ 0.58
MCF2L2-201ENST00000328913 BIVM-ERCC5R4GMW8 1640 aa18.7■□□□□ 0.58
MCF2L2-201ENST00000328913 WASLO00401 505 aaPredicted RBP18.7■□□□□ 0.58
MCF2L2-201ENST00000328913 CLCN1P35523 988 aa18.7■□□□□ 0.58
MCF2L2-201ENST00000328913 CNNM1Q9NRU3 951 aa18.69■□□□□ 0.58
MCF2L2-201ENST00000328913 CDKL5O76039 1030 aa18.69■□□□□ 0.58
MCF2L2-201ENST00000328913 RDXP35241 583 aaKnown RBP18.69■□□□□ 0.58
MCF2L2-201ENST00000328913 CT47A1Q5JQC4 288 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms