RNA–Protein interactions for RNA: ENST00000327578.9

PCM1-202, Transcript of pericentriolar material 1, humanhuman

TSL 5 BASIC

Gene PCM1, Length 8,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-202ENST00000327578 MIA2Q96PC5 1412 aa16.08■□□□□ 0.16
PCM1-202ENST00000327578 JAKMIP1Q96N16 626 aaKnown RBP16.08■□□□□ 0.16
PCM1-202ENST00000327578 MNAT1P51948 309 aa16.07■□□□□ 0.16
PCM1-202ENST00000327578 RAPGEF4Q8WZA2 1011 aa16.07■□□□□ 0.16
PCM1-202ENST00000327578 LMAN1P49257 510 aa16.07■□□□□ 0.16
PCM1-202ENST00000327578 PIBF1Q8WXW3 757 aa16.07■□□□□ 0.16
PCM1-202ENST00000327578 C16orf45Q96MC5 204 aaPredicted RBP16.07■□□□□ 0.16
PCM1-202ENST00000327578 CCDC88BA6NC98 1476 aa16.07■□□□□ 0.16
PCM1-202ENST00000327578 BRD4O60885 1362 aaPredicted RBP16.07■□□□□ 0.16
PCM1-202ENST00000327578 CWC27Q6UX04 472 aaKnown RBP16.07■□□□□ 0.16
PCM1-202ENST00000327578 CETN2P41208 172 aa16.07■□□□□ 0.16
PCM1-202ENST00000327578 SMC1AQ14683 1233 aaKnown RBP16.07■□□□□ 0.16
PCM1-202ENST00000327578 CCDC183Q5T5S1 534 aa16.07■□□□□ 0.16
PCM1-202ENST00000327578 CLIP2Q9UDT6 1046 aa16.07■□□□□ 0.16
PCM1-202ENST00000327578 POTEJP0CG39 1038 aa16.06■□□□□ 0.16
PCM1-202ENST00000327578 TIGD1Q96MW7 591 aa16.06■□□□□ 0.16
PCM1-202ENST00000327578 PUS7Q96PZ0 661 aaKnown RBP16.06■□□□□ 0.16
PCM1-202ENST00000327578 SERPINA10Q9UK55 444 aa16.06■□□□□ 0.16
PCM1-202ENST00000327578 CTNNBL1Q8WYA6 563 aaPredicted RBP16.06■□□□□ 0.16
PCM1-202ENST00000327578 SPECC1Q5M775 1068 aa16.06■□□□□ 0.16
PCM1-202ENST00000327578 CHD1LQ86WJ1 897 aa16.06■□□□□ 0.16
PCM1-202ENST00000327578 CEP131Q9UPN4 1083 aa16.06■□□□□ 0.16
PCM1-202ENST00000327578 NACADO15069 1562 aa16.06■□□□□ 0.16
PCM1-202ENST00000327578 KLHL10Q6JEL2 608 aa16.06■□□□□ 0.16
PCM1-202ENST00000327578 GIGYF2Q6Y7W6 1299 aaKnown RBP16.06■□□□□ 0.16
PCM1-202ENST00000327578 DNAAF4Q8WXU2 420 aa16.06■□□□□ 0.16
PCM1-202ENST00000327578 TOP1P11387 765 aaKnown RBP16.06■□□□□ 0.16
PCM1-202ENST00000327578 SRRTQ9BXP5 876 aaKnown RBP16.06■□□□□ 0.16
PCM1-202ENST00000327578 CASTP20810 708 aaKnown RBP16.05■□□□□ 0.16
PCM1-202ENST00000327578 ZNF526Q8TF50 670 aaPredicted RBP16.05■□□□□ 0.16
PCM1-202ENST00000327578 DDX23Q9BUQ8 820 aaKnown RBP16.05■□□□□ 0.16
PCM1-202ENST00000327578 TMCO5BA8MYB1 307 aa16.05■□□□□ 0.16
PCM1-202ENST00000327578 CACNA2D4Q7Z3S7 1137 aa16.05■□□□□ 0.16
PCM1-202ENST00000327578 FKBP4Q02790 459 aaKnown RBP eCLIP16.05■□□□□ 0.16
PCM1-202ENST00000327578 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.05■□□□□ 0.16
PCM1-202ENST00000327578 NACAP1Q9BZK3 213 aa16.05■□□□□ 0.16
PCM1-202ENST00000327578 BCAR3O75815 825 aa16.04■□□□□ 0.16
PCM1-202ENST00000327578 SMARCC1Q92922 1105 aaPredicted RBP16.04■□□□□ 0.16
PCM1-202ENST00000327578 WIZO95785 1651 aa16.04■□□□□ 0.16
PCM1-202ENST00000327578 CFAP57Q96MR6 1250 aa16.04■□□□□ 0.16
PCM1-202ENST00000327578 CIZ1Q9ULV3 898 aaPredicted RBP16.04■□□□□ 0.16
PCM1-202ENST00000327578 HLTFQ14527 1009 aaKnown RBP eCLIP16.04■□□□□ 0.165e-7■□□□□ 10.4
PCM1-202ENST00000327578 GNL3LQ9NVN8 582 aaKnown RBP16.04■□□□□ 0.16
PCM1-202ENST00000327578 NUP88Q99567 741 aaPredicted RBP16.03■□□□□ 0.16
PCM1-202ENST00000327578 ZNF76P36508 570 aa16.03■□□□□ 0.16
PCM1-202ENST00000327578 NUTM2GQ5VZR2 741 aa16.03■□□□□ 0.16
PCM1-202ENST00000327578 PAFAH1B1P43034 410 aa16.03■□□□□ 0.16
PCM1-202ENST00000327578 FKBP15Q5T1M5 1219 aa16.03■□□□□ 0.16
PCM1-202ENST00000327578 ZMYND15Q9H091 742 aa16.03■□□□□ 0.16
PCM1-202ENST00000327578 EXOSC9Q06265 439 aaKnown RBP16.03■□□□□ 0.16
PCM1-202ENST00000327578 MTHFSP49914 203 aa16.02■□□□□ 0.16
PCM1-202ENST00000327578 DAAM2Q86T65 1068 aa16.02■□□□□ 0.16
PCM1-202ENST00000327578 SRCIN1Q9C0H9 1055 aa16.02■□□□□ 0.16
PCM1-202ENST00000327578 ANO10Q9NW15 660 aa16.02■□□□□ 0.16
PCM1-202ENST00000327578 ANKRD18BA2A2Z9 1011 aa16.02■□□□□ 0.16
PCM1-202ENST00000327578 TWISTNBQ3B726 338 aaPredicted RBP16.02■□□□□ 0.16
PCM1-202ENST00000327578 LARP1Q6PKG0 1096 aaKnown RBP16.02■□□□□ 0.16
PCM1-202ENST00000327578 HOOK3Q86VS8 718 aa16.02■□□□□ 0.16
PCM1-202ENST00000327578 GGNBP2Q9H3C7 697 aa16.02■□□□□ 0.16
PCM1-202ENST00000327578 PDE3AQ14432 1141 aa16.02■□□□□ 0.16
PCM1-202ENST00000327578 PPP1R12BO60237 982 aaPredicted RBP16.02■□□□□ 0.15
PCM1-202ENST00000327578 SPECC1LQ69YQ0 1117 aa16.02■□□□□ 0.15
PCM1-202ENST00000327578 PPP6R1Q9UPN7 881 aa16.02■□□□□ 0.15
PCM1-202ENST00000327578 CCDC160A6NGH7 325 aa16.01■□□□□ 0.15
PCM1-202ENST00000327578 ZSCAN31Q96LW9 406 aaPredicted RBP16.01■□□□□ 0.15
PCM1-202ENST00000327578 TRIM21P19474 475 aaKnown RBP16.01■□□□□ 0.15
PCM1-202ENST00000327578 TAOK3Q9H2K8 898 aa16.01■□□□□ 0.15
PCM1-202ENST00000327578 MPHOSPH10O00566 681 aaKnown RBP16.01■□□□□ 0.15
PCM1-202ENST00000327578 TDO2P48775 406 aa16.01■□□□□ 0.15
PCM1-202ENST00000327578 MAATS1Q7Z4T9 603 aa16■□□□□ 0.15
PCM1-202ENST00000327578 USO1O60763 962 aaKnown RBP16■□□□□ 0.15
PCM1-202ENST00000327578 TSG101Q99816 390 aa16■□□□□ 0.15
PCM1-202ENST00000327578 C6orf163Q5TEZ5 329 aa16■□□□□ 0.15
PCM1-202ENST00000327578 CCT4P50991 539 aaKnown RBP16■□□□□ 0.15
PCM1-202ENST00000327578 UBAC1Q9BSL1 405 aa16■□□□□ 0.15
PCM1-202ENST00000327578 POTEB2H3BUK9 544 aa15.99■□□□□ 0.15
PCM1-202ENST00000327578 AACSQ86V21 672 aa15.99■□□□□ 0.15
PCM1-202ENST00000327578 CCDC83Q8IWF9 413 aa15.99■□□□□ 0.15
PCM1-202ENST00000327578 TCP11L2Q8N4U5 519 aa15.99■□□□□ 0.15
PCM1-202ENST00000327578 WASF1Q92558 559 aa15.99■□□□□ 0.15
PCM1-202ENST00000327578 CABP2Q9NPB3 220 aa15.99■□□□□ 0.15
PCM1-202ENST00000327578 USP5P45974 858 aa15.99■□□□□ 0.15
PCM1-202ENST00000327578 SLC4A2P04920 1241 aa15.99■□□□□ 0.15
PCM1-202ENST00000327578 BMS1Q14692 1282 aaKnown RBP15.99■□□□□ 0.15
PCM1-202ENST00000327578 ZSCAN25Q6NSZ9 544 aa15.99■□□□□ 0.15
PCM1-202ENST00000327578 NAA15Q9BXJ9 866 aaKnown RBP15.99■□□□□ 0.15
PCM1-202ENST00000327578 ATP2C2O75185 946 aa15.99■□□□□ 0.15
PCM1-202ENST00000327578 TSR2Q969E8 191 aaKnown RBP15.99■□□□□ 0.15
PCM1-202ENST00000327578 CEP135Q66GS9 1140 aa15.99■□□□□ 0.15
PCM1-202ENST00000327578 VPS36Q86VN1 386 aa15.99■□□□□ 0.15
PCM1-202ENST00000327578 MACROD2A1Z1Q3 448 aa15.98■□□□□ 0.15
PCM1-202ENST00000327578 DYNC1I1O14576 645 aa15.98■□□□□ 0.15
PCM1-202ENST00000327578 HSF2BPO75031 334 aa15.98■□□□□ 0.15
PCM1-202ENST00000327578 CPLX3Q8WVH0 158 aa15.98■□□□□ 0.15
PCM1-202ENST00000327578 SNW1Q13573 536 aaKnown RBP15.97■□□□□ 0.15
PCM1-202ENST00000327578 UBE2Q2Q8WVN8 375 aa15.97■□□□□ 0.15
PCM1-202ENST00000327578 HOMER2Q9NSB8 354 aa15.97■□□□□ 0.15
PCM1-202ENST00000327578 GRIPAP1Q4V328 841 aa15.97■□□□□ 0.15
PCM1-202ENST00000327578 KRT32Q14532 448 aa15.97■□□□□ 0.15
PCM1-202ENST00000327578 HSPA4P34932 840 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms