RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 ALDH1L2Q3SY69 923 aa13.28□□□□□ -0.28
CUL4A-201ENST00000326335 ZNF330Q9Y3S2 320 aaPredicted RBP13.28□□□□□ -0.28
CUL4A-201ENST00000326335 TRIM6-TRIM34B2RNG4 842 aa13.28□□□□□ -0.28
CUL4A-201ENST00000326335 HOXC9P31274 260 aa13.28□□□□□ -0.28
CUL4A-201ENST00000326335 NBPF6Q5VWK0 638 aa13.28□□□□□ -0.28
CUL4A-201ENST00000326335 NBPF4Q96M43 638 aa13.28□□□□□ -0.28
CUL4A-201ENST00000326335 CPSF1Q10570 1443 aaKnown RBP13.28□□□□□ -0.28
CUL4A-201ENST00000326335 NLRP2Q9NX02 1062 aa13.27□□□□□ -0.28
CUL4A-201ENST00000326335 IL16Q14005 1332 aa13.27□□□□□ -0.28
CUL4A-201ENST00000326335 ATP7BP35670 1465 aa13.27□□□□□ -0.29
CUL4A-201ENST00000326335 NUCB1Q02818 461 aa13.27□□□□□ -0.29
CUL4A-201ENST00000326335 HDGFL1Q5TGJ6 251 aa13.27□□□□□ -0.29
CUL4A-201ENST00000326335 HSCBQ8IWL3 235 aa13.27□□□□□ -0.29
CUL4A-201ENST00000326335 TBC1D32Q96NH3 1257 aa13.27□□□□□ -0.29
CUL4A-201ENST00000326335 PRAMEF22A3QJZ6 481 aa13.26□□□□□ -0.29
CUL4A-201ENST00000326335 CT47B1P0C2W7 299 aaPredicted RBP13.26□□□□□ -0.29
CUL4A-201ENST00000326335 TEFQ10587 303 aa13.26□□□□□ -0.29
CUL4A-201ENST00000326335 ZNF530Q6P9A1 599 aaPredicted RBP13.26□□□□□ -0.29
CUL4A-201ENST00000326335 MSH6P52701 1360 aa13.26□□□□□ -0.29
CUL4A-201ENST00000326335 PLEKHG3A1L390 1219 aa13.26□□□□□ -0.29
CUL4A-201ENST00000326335 SMC5Q8IY18 1101 aa13.26□□□□□ -0.29
CUL4A-201ENST00000326335 TBX22Q9Y458 520 aa13.26□□□□□ -0.29
CUL4A-201ENST00000326335 USP6P35125 1406 aa13.26□□□□□ -0.29
CUL4A-201ENST00000326335 GNAT3A8MTJ3 354 aa13.26□□□□□ -0.29
CUL4A-201ENST00000326335 HAP1P54257 671 aaPredicted RBP13.26□□□□□ -0.29
CUL4A-201ENST00000326335 SLC39A6Q13433 755 aa13.26□□□□□ -0.29
CUL4A-201ENST00000326335 HDAC1Q13547 482 aaPredicted RBP13.26□□□□□ -0.29
CUL4A-201ENST00000326335 IL17REQ8NFR9 667 aa13.26□□□□□ -0.29
CUL4A-201ENST00000326335 TBC1D9Q6ZT07 1266 aa13.25□□□□□ -0.29
CUL4A-201ENST00000326335 CHL1O00533 1208 aa13.25□□□□□ -0.29
CUL4A-201ENST00000326335 ZNF853P0CG23 659 aa13.25□□□□□ -0.29
CUL4A-201ENST00000326335 OS9Q13438 667 aaPredicted RBP13.25□□□□□ -0.29
CUL4A-201ENST00000326335 KAT6BQ8WYB5 2073 aa13.25□□□□□ -0.29
CUL4A-201ENST00000326335 CD2BP2O95400 341 aaKnown RBP13.23□□□□□ -0.29
CUL4A-201ENST00000326335 MYL6BP14649 208 aa13.23□□□□□ -0.29
CUL4A-201ENST00000326335 FLIIQ13045 1269 aa13.23□□□□□ -0.29
CUL4A-201ENST00000326335 NUTM1Q86Y26 1132 aa13.23□□□□□ -0.29
CUL4A-201ENST00000326335 LARP6Q9BRS8 491 aaKnown RBP13.23□□□□□ -0.29
CUL4A-201ENST00000326335 LRRFIP2Q9Y608 721 aaKnown RBP13.23□□□□□ -0.29
CUL4A-201ENST00000326335 GSE1Q14687 1217 aa13.23□□□□□ -0.29
CUL4A-201ENST00000326335 SPATA31D1Q6ZQQ2 1576 aa13.23□□□□□ -0.29
CUL4A-201ENST00000326335 GAS2L2Q8NHY3 880 aa13.22□□□□□ -0.29
CUL4A-201ENST00000326335 PLEKHG1Q9ULL1 1385 aa13.22□□□□□ -0.29
CUL4A-201ENST00000326335 PNMA6EA0A0J9YXQ4 647 aa13.22□□□□□ -0.29
CUL4A-201ENST00000326335 NCLP19338 710 aaKnown RBP13.22□□□□□ -0.29
CUL4A-201ENST00000326335 DDX54Q8TDD1 881 aaKnown RBP13.22□□□□□ -0.29
CUL4A-201ENST00000326335 FLT4P35916 1363 aa13.21□□□□□ -0.29
CUL4A-201ENST00000326335 CHPF2Q9P2E5 772 aa13.21□□□□□ -0.29
CUL4A-201ENST00000326335 GSPT1P15170 499 aaKnown RBP13.21□□□□□ -0.29
CUL4A-201ENST00000326335 CEP85Q6P2H3 762 aa13.21□□□□□ -0.29
CUL4A-201ENST00000326335 CHAMP1Q96JM3 812 aa13.21□□□□□ -0.29
CUL4A-201ENST00000326335 GOLGB1Q14789 3259 aaKnown RBP13.2□□□□□ -0.3
CUL4A-201ENST00000326335 C1orf141Q5JVX7 400 aa13.2□□□□□ -0.3
CUL4A-201ENST00000326335 TAOK2Q9UL54 1235 aa13.2□□□□□ -0.3
CUL4A-201ENST00000326335 AXIN2Q9Y2T1 843 aa13.2□□□□□ -0.3
CUL4A-201ENST00000326335 BTBD11A6QL63 1104 aa13.2□□□□□ -0.3
CUL4A-201ENST00000326335 TAF7Q15545 349 aaPredicted RBP13.2□□□□□ -0.3
CUL4A-201ENST00000326335 SIL1Q9H173 461 aa13.2□□□□□ -0.3
CUL4A-201ENST00000326335 KIF13AQ9H1H9 1805 aa13.19□□□□□ -0.3
CUL4A-201ENST00000326335 PI4KAP2A4QPH2 592 aa13.19□□□□□ -0.3
CUL4A-201ENST00000326335 SURF6O75683 361 aaKnown RBP13.19□□□□□ -0.3
CUL4A-201ENST00000326335 GCP02774 474 aa13.19□□□□□ -0.3
CUL4A-201ENST00000326335 PI4KAP1Q8N8J0 262 aa13.19□□□□□ -0.3
CUL4A-201ENST00000326335 DLC1Q96QB1 1528 aa13.19□□□□□ -0.3
CUL4A-201ENST00000326335 RIMS1Q86UR5 1692 aaKnown RBP13.19□□□□□ -0.3
CUL4A-201ENST00000326335 AGLP35573 1532 aa13.19□□□□□ -0.3
CUL4A-201ENST00000326335 PLEKHM2Q8IWE5 1019 aa13.18□□□□□ -0.3
CUL4A-201ENST00000326335 GCC1Q96CN9 775 aa13.18□□□□□ -0.3
CUL4A-201ENST00000326335 ABCC4O15439 1325 aa13.18□□□□□ -0.3
CUL4A-201ENST00000326335 KRT28Q7Z3Y7 464 aa13.18□□□□□ -0.3
CUL4A-201ENST00000326335 CCDC30Q5VVM6 783 aa13.18□□□□□ -0.3
CUL4A-201ENST00000326335 ANKRD24Q8TF21 1146 aa13.18□□□□□ -0.3
CUL4A-201ENST00000326335 CDK12Q9NYV4 1490 aaPredicted RBP13.18□□□□□ -0.3
CUL4A-201ENST00000326335 UBTFL1P0CB47 393 aaPredicted RBP13.17□□□□□ -0.3
CUL4A-201ENST00000326335 SDSP20132 328 aa13.17□□□□□ -0.3
CUL4A-201ENST00000326335 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.17□□□□□ -0.3
CUL4A-201ENST00000326335 NRXN3Q9Y4C0 1643 aa13.17□□□□□ -0.3
CUL4A-201ENST00000326335 AATKQ6ZMQ8 1374 aa13.17□□□□□ -0.3
CUL4A-201ENST00000326335 CWF19L2Q2TBE0 894 aaKnown RBP13.17□□□□□ -0.3
CUL4A-201ENST00000326335 ANO2Q9NQ90 1003 aa13.17□□□□□ -0.3
CUL4A-201ENST00000326335 PROSER3Q2NL68 480 aa13.17□□□□□ -0.3
CUL4A-201ENST00000326335 GNAI2P04899 355 aa13.16□□□□□ -0.3
CUL4A-201ENST00000326335 NBPF7P0C2Y1 421 aaPredicted RBP13.16□□□□□ -0.3
CUL4A-201ENST00000326335 STRN4Q9NRL3 753 aa13.16□□□□□ -0.3
CUL4A-201ENST00000326335 MED14O60244 1454 aa13.16□□□□□ -0.3
CUL4A-201ENST00000326335 ATF3P18847 181 aa13.16□□□□□ -0.3
CUL4A-201ENST00000326335 KIF20BQ96Q89 1820 aa13.16□□□□□ -0.3
CUL4A-201ENST00000326335 SRGAP3O43295 1099 aa13.16□□□□□ -0.3
CUL4A-201ENST00000326335 PA2G4Q9UQ80 394 aaKnown RBP13.16□□□□□ -0.3
CUL4A-201ENST00000326335 SBNO1A3KN83 1393 aa13.16□□□□□ -0.3
CUL4A-201ENST00000326335 TTC21AQ8NDW8 1320 aa13.15□□□□□ -0.3
CUL4A-201ENST00000326335 UPF3BQ9BZI7 483 aaKnown RBP13.15□□□□□ -0.3
CUL4A-201ENST00000326335 C9orf78Q9NZ63 289 aaPredicted RBP13.15□□□□□ -0.3
CUL4A-201ENST00000326335 CDC45O75419 566 aa13.15□□□□□ -0.3
CUL4A-201ENST00000326335 CDC42BPGQ6DT37 1551 aa13.15□□□□□ -0.3
CUL4A-201ENST00000326335 ANKRD44Q8N8A2 993 aa13.15□□□□□ -0.3
CUL4A-201ENST00000326335 KLHDC4Q8TBB5 520 aa13.15□□□□□ -0.3
CUL4A-201ENST00000326335 CHMP4BQ9H444 224 aaKnown RBP13.15□□□□□ -0.3
CUL4A-201ENST00000326335 CHMP3Q9Y3E7 222 aa13.15□□□□□ -0.3
CUL4A-201ENST00000326335 CEP170BQ9Y4F5 1589 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms