RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 OVOS2Q6IE36 1432 aa24.78■■□□□ 1.56
SOX2-201ENST00000325404 TTC21AQ8NDW8 1320 aa24.78■■□□□ 1.56
SOX2-201ENST00000325404 FMN2Q9NZ56 1722 aa24.77■■□□□ 1.56
SOX2-201ENST00000325404 INTS3Q68E01 1043 aaKnown RBP24.77■■□□□ 1.56
SOX2-201ENST00000325404 SPRYD3Q8NCJ5 442 aa24.76■■□□□ 1.55
SOX2-201ENST00000325404 RGPD8O14715 1765 aaPredicted RBP24.76■■□□□ 1.55
SOX2-201ENST00000325404 RRS1Q15050 365 aaKnown RBP24.76■■□□□ 1.55
SOX2-201ENST00000325404 KIF2CQ99661 725 aa24.75■■□□□ 1.55
SOX2-201ENST00000325404 ISY1Q9ULR0 285 aaKnown RBP24.75■■□□□ 1.55
SOX2-201ENST00000325404 KIAA0232Q92628 1395 aa24.75■■□□□ 1.55
SOX2-201ENST00000325404 TRAK2O60296 914 aa24.75■■□□□ 1.55
SOX2-201ENST00000325404 GOLGA6L3A6NEY3 463 aa24.74■■□□□ 1.55
SOX2-201ENST00000325404 TBC1D9Q6ZT07 1266 aa24.74■■□□□ 1.55
SOX2-201ENST00000325404 DCTPP1Q9H773 170 aa24.74■■□□□ 1.55
SOX2-201ENST00000325404 PTMSP20962 102 aa24.74■■□□□ 1.55
SOX2-201ENST00000325404 C1orf115Q9H7X2 142 aa24.74■■□□□ 1.55
SOX2-201ENST00000325404 NALCNQ8IZF0 1738 aa24.74■■□□□ 1.55
SOX2-201ENST00000325404 CDC45O75419 566 aa24.73■■□□□ 1.55
SOX2-201ENST00000325404 ELL2O00472 640 aaPredicted RBP24.72■■□□□ 1.55
SOX2-201ENST00000325404 ADGRL3Q9HAR2 1447 aa24.72■■□□□ 1.55
SOX2-201ENST00000325404 CHL1O00533 1208 aa24.71■■□□□ 1.55
SOX2-201ENST00000325404 USP31Q70CQ4 1352 aa24.71■■□□□ 1.55
SOX2-201ENST00000325404 HSP90AB1P08238 724 aaKnown RBP24.7■■□□□ 1.54
SOX2-201ENST00000325404 RPAP2Q8IXW5 612 aaPredicted RBP24.7■■□□□ 1.54
SOX2-201ENST00000325404 RBM33Q96EV2 1170 aaKnown RBP24.7■■□□□ 1.54
SOX2-201ENST00000325404 EIF4A2Q14240 407 aaKnown RBP24.69■■□□□ 1.54
SOX2-201ENST00000325404 PTPRCP08575 1304 aa24.69■■□□□ 1.54
SOX2-201ENST00000325404 RAB3GAP1Q15042 981 aa24.69■■□□□ 1.54
SOX2-201ENST00000325404 ANKRD44Q8N8A2 993 aa24.69■■□□□ 1.54
SOX2-201ENST00000325404 FAM83GA6ND36 823 aa24.68■■□□□ 1.54
SOX2-201ENST00000325404 RGS12O14924 1447 aa24.68■■□□□ 1.54
SOX2-201ENST00000325404 PLEKHM2Q8IWE5 1019 aa24.68■■□□□ 1.54
SOX2-201ENST00000325404 GBP4Q96PP9 640 aa24.68■■□□□ 1.54
SOX2-201ENST00000325404 K7ELQ4 463 aaPredicted RBP24.67■■□□□ 1.54
SOX2-201ENST00000325404 XRCC6P12956 609 aaKnown RBP eCLIP24.67■■□□□ 1.54
SOX2-201ENST00000325404 RGPD1P0DJD0 1748 aa24.67■■□□□ 1.54
SOX2-201ENST00000325404 NWD1Q149M9 1564 aa24.67■■□□□ 1.54
SOX2-201ENST00000325404 ATP10DQ9P241 1426 aa24.66■■□□□ 1.54
SOX2-201ENST00000325404 SKOR2Q2VWA4 1001 aaPredicted RBP24.66■■□□□ 1.54
SOX2-201ENST00000325404 C14orf37Q86TY3 774 aa24.66■■□□□ 1.54
SOX2-201ENST00000325404 PHF8Q9UPP1 1060 aa24.66■■□□□ 1.54
SOX2-201ENST00000325404 MRE11P49959 708 aa24.65■■□□□ 1.54
SOX2-201ENST00000325404 SULT6B1Q6IMI4 303 aa24.65■■□□□ 1.54
SOX2-201ENST00000325404 TNPO1Q92973 898 aaKnown RBP24.65■■□□□ 1.54
SOX2-201ENST00000325404 DCTN1Q14203 1278 aa24.64■■□□□ 1.53
SOX2-201ENST00000325404 TTC22Q5TAA0 569 aa24.64■■□□□ 1.53
SOX2-201ENST00000325404 CLEC17AQ6ZS10 378 aa24.64■■□□□ 1.53
SOX2-201ENST00000325404 GSPT1P15170 499 aaKnown RBP24.63■■□□□ 1.53
SOX2-201ENST00000325404 PIK3C2AO00443 1686 aa24.62■■□□□ 1.53
SOX2-201ENST00000325404 SOX12O15370 315 aa24.62■■□□□ 1.53
SOX2-201ENST00000325404 NLRP6P59044 892 aa24.61■■□□□ 1.53
SOX2-201ENST00000325404 RABEP1Q15276 862 aa24.61■■□□□ 1.53
SOX2-201ENST00000325404 AEBP1Q8IUX7 1158 aa24.61■■□□□ 1.53
SOX2-201ENST00000325404 ARHGEF10O15013 1369 aa24.61■■□□□ 1.53
SOX2-201ENST00000325404 CRB1P82279 1406 aa24.61■■□□□ 1.53
SOX2-201ENST00000325404 CEP85Q6P2H3 762 aa24.6■■□□□ 1.53
SOX2-201ENST00000325404 RTL1A6NKG5 1358 aa24.6■■□□□ 1.53
SOX2-201ENST00000325404 PROSER2Q86WR7 435 aaPredicted RBP24.59■■□□□ 1.53
SOX2-201ENST00000325404 ANO8Q9HCE9 1232 aaPredicted RBP24.59■■□□□ 1.53
SOX2-201ENST00000325404 MAP3K19Q56UN5 1328 aa24.59■■□□□ 1.53
SOX2-201ENST00000325404 PEAK1Q9H792 1746 aa24.58■■□□□ 1.53
SOX2-201ENST00000325404 ESCO1Q5FWF5 840 aa24.58■■□□□ 1.53
SOX2-201ENST00000325404 GZF1Q9H116 711 aaPredicted RBP24.58■■□□□ 1.52
SOX2-201ENST00000325404 CD2BP2O95400 341 aaKnown RBP24.57■■□□□ 1.52
SOX2-201ENST00000325404 HSP90AA1P07900 732 aaKnown RBP24.57■■□□□ 1.52
SOX2-201ENST00000325404 HSP90AB2PQ58FF8 381 aa24.57■■□□□ 1.52
SOX2-201ENST00000325404 ABTB2Q8N961 1025 aa24.57■■□□□ 1.52
SOX2-201ENST00000325404 SBNO1A3KN83 1393 aa24.57■■□□□ 1.52
SOX2-201ENST00000325404 FLT4P35916 1363 aa24.56■■□□□ 1.52
SOX2-201ENST00000325404 USP26Q9BXU7 913 aa24.56■■□□□ 1.52
SOX2-201ENST00000325404 CASC1Q6TDU7 716 aa24.54■■□□□ 1.52
SOX2-201ENST00000325404 MCM10Q7L590 875 aa24.54■■□□□ 1.52
SOX2-201ENST00000325404 MSH6P52701 1360 aa24.54■■□□□ 1.52
SOX2-201ENST00000325404 USP54Q70EL1 1684 aa24.54■■□□□ 1.52
SOX2-201ENST00000325404 HMMRO75330 724 aa24.54■■□□□ 1.52
SOX2-201ENST00000325404 NUTM2GQ5VZR2 741 aa24.54■■□□□ 1.52
SOX2-201ENST00000325404 KDRP35968 1356 aa24.54■■□□□ 1.52
SOX2-201ENST00000325404 AMPHP49418 695 aa24.53■■□□□ 1.52
SOX2-201ENST00000325404 GRPEL1Q9HAV7 217 aa24.53■■□□□ 1.52
SOX2-201ENST00000325404 PSME1Q06323 249 aa24.53■■□□□ 1.52
SOX2-201ENST00000325404 RBM42Q9BTD8 480 aaKnown RBP24.52■■□□□ 1.52
SOX2-201ENST00000325404 OSBPL3Q9H4L5 887 aa24.52■■□□□ 1.52
SOX2-201ENST00000325404 CCT4P50991 539 aaKnown RBP24.52■■□□□ 1.52
SOX2-201ENST00000325404 GAS2L2Q8NHY3 880 aa24.52■■□□□ 1.52
SOX2-201ENST00000325404 KRT24Q2M2I5 525 aa24.51■■□□□ 1.51
SOX2-201ENST00000325404 GOLGA6L22H0YM25 854 aa24.51■■□□□ 1.51
SOX2-201ENST00000325404 HTATSF1O43719 755 aaKnown RBP24.51■■□□□ 1.51
SOX2-201ENST00000325404 C19orf44Q9H6X5 657 aa24.5■■□□□ 1.51
SOX2-201ENST00000325404 HSPA2P54652 639 aa24.5■■□□□ 1.51
SOX2-201ENST00000325404 RRAGDQ9NQL2 400 aaPredicted RBP24.5■■□□□ 1.51
SOX2-201ENST00000325404 MARF1Q9Y4F3 1742 aaKnown RBP24.49■■□□□ 1.51
SOX2-201ENST00000325404 SLC4A2P04920 1241 aa24.49■■□□□ 1.51
SOX2-201ENST00000325404 SDSP20132 328 aa24.49■■□□□ 1.51
SOX2-201ENST00000325404 C16orf71Q8IYS4 520 aaPredicted RBP24.49■■□□□ 1.51
SOX2-201ENST00000325404 MEIS3Q99687 375 aa24.49■■□□□ 1.51
SOX2-201ENST00000325404 IBTKQ9P2D0 1353 aaPredicted RBP24.49■■□□□ 1.51
SOX2-201ENST00000325404 NUCB2P80303 420 aa24.49■■□□□ 1.51
SOX2-201ENST00000325404 ORAI2Q96SN7 254 aa24.49■■□□□ 1.51
SOX2-201ENST00000325404 SOS1Q07889 1333 aaPredicted RBP24.48■■□□□ 1.51
SOX2-201ENST00000325404 REC8O95072 547 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms