RNA–Protein interactions for RNA: ENST00000324856.11

ARID1A-201, Transcript of AT-rich interaction domain 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARID1A, Length 8,577 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-201ENST00000324856 C16orf45Q96MC5 204 aaPredicted RBP21.47■■□□□ 1.03
ARID1A-201ENST00000324856 WIZO95785 1651 aa21.47■■□□□ 1.03
ARID1A-201ENST00000324856 FGFR1OPO95684 399 aaKnown RBP21.46■■□□□ 1.03
ARID1A-201ENST00000324856 DDX46Q7L014 1031 aaKnown RBP21.46■■□□□ 1.03
ARID1A-201ENST00000324856 CCDC113Q9H0I3 377 aa21.46■■□□□ 1.03
ARID1A-201ENST00000324856 CLIP2Q9UDT6 1046 aa21.46■■□□□ 1.03
ARID1A-201ENST00000324856 EIF2S2P20042 333 aaKnown RBP21.46■■□□□ 1.03
ARID1A-201ENST00000324856 KIF4BQ2VIQ3 1234 aa21.46■■□□□ 1.03
ARID1A-201ENST00000324856 WASF1Q92558 559 aa21.46■■□□□ 1.03
ARID1A-201ENST00000324856 USO1O60763 962 aaKnown RBP21.45■■□□□ 1.03
ARID1A-201ENST00000324856 GNAI2P04899 355 aa21.45■■□□□ 1.02
ARID1A-201ENST00000324856 CEP112Q8N8E3 955 aa21.45■■□□□ 1.02
ARID1A-201ENST00000324856 SPECC1Q5M775 1068 aa21.45■■□□□ 1.02
ARID1A-201ENST00000324856 ALS2CR12Q96Q35 445 aa21.45■■□□□ 1.02
ARID1A-201ENST00000324856 TUBB4AP04350 444 aa21.45■■□□□ 1.02
ARID1A-201ENST00000324856 CCDC171Q6TFL3 1326 aa21.45■■□□□ 1.02
ARID1A-201ENST00000324856 TOP1P11387 765 aaKnown RBP21.44■■□□□ 1.02
ARID1A-201ENST00000324856 SUPT6HQ7KZ85 1726 aaKnown RBP21.44■■□□□ 1.02
ARID1A-201ENST00000324856 NSRP1Q9H0G5 558 aaKnown RBP21.44■■□□□ 1.02
ARID1A-201ENST00000324856 TDO2P48775 406 aa21.44■■□□□ 1.02
ARID1A-201ENST00000324856 HOOK3Q86VS8 718 aa21.43■■□□□ 1.02
ARID1A-201ENST00000324856 TTC31Q49AM3 519 aaPredicted RBP21.43■■□□□ 1.02
ARID1A-201ENST00000324856 LTV1Q96GA3 475 aaPredicted RBP21.43■■□□□ 1.02
ARID1A-201ENST00000324856 URI1O94763 535 aaPredicted RBP21.43■■□□□ 1.02
ARID1A-201ENST00000324856 CLCN1P35523 988 aa21.43■■□□□ 1.02
ARID1A-201ENST00000324856 DHX37Q8IY37 1157 aaKnown RBP21.43■■□□□ 1.02
ARID1A-201ENST00000324856 GSTTP1A0A1W2PQM5 241 aa21.43■■□□□ 1.02
ARID1A-201ENST00000324856 TSPYL4Q9UJ04 414 aa21.43■■□□□ 1.02
ARID1A-201ENST00000324856 NEUROD6Q96NK8 337 aa21.42■■□□□ 1.02
ARID1A-201ENST00000324856 VGFO15240 615 aaPredicted RBP21.42■■□□□ 1.02
ARID1A-201ENST00000324856 RBM25P49756 843 aaKnown RBP21.42■■□□□ 1.02
ARID1A-201ENST00000324856 CCDC30Q5VVM6 783 aa21.42■■□□□ 1.02
ARID1A-201ENST00000324856 PDZRN3Q9UPQ7 1066 aa21.42■■□□□ 1.02
ARID1A-201ENST00000324856 CCDC88BA6NC98 1476 aa21.41■■□□□ 1.02
ARID1A-201ENST00000324856 ANAPC15P60006 121 aa21.41■■□□□ 1.02
ARID1A-201ENST00000324856 MSL1Q68DK7 614 aa21.41■■□□□ 1.02
ARID1A-201ENST00000324856 FKBP15Q5T1M5 1219 aa21.41■■□□□ 1.02
ARID1A-201ENST00000324856 BLOC1S2Q6QNY1 142 aa21.4■■□□□ 1.02
ARID1A-201ENST00000324856 RSRC1Q96IZ7 334 aaKnown RBP21.4■■□□□ 1.02
ARID1A-201ENST00000324856 DNAI2Q9GZS0 605 aa21.4■■□□□ 1.02
ARID1A-201ENST00000324856 CCDC57Q2TAC2 916 aa21.4■■□□□ 1.02
ARID1A-201ENST00000324856 SNW1Q13573 536 aaKnown RBP21.4■■□□□ 1.02
ARID1A-201ENST00000324856 RAI14Q9P0K7 980 aa21.4■■□□□ 1.02
ARID1A-201ENST00000324856 CEP83Q9Y592 693 aa21.4■■□□□ 1.02
ARID1A-201ENST00000324856 CCT4P50991 539 aaKnown RBP21.4■■□□□ 1.02
ARID1A-201ENST00000324856 SRRTQ9BXP5 876 aaKnown RBP21.39■■□□□ 1.02
ARID1A-201ENST00000324856 MYH10P35580 1976 aa21.39■■□□□ 1.02
ARID1A-201ENST00000324856 A0A1B0GUA9 196 aa21.39■■□□□ 1.02
ARID1A-201ENST00000324856 KIF20AO95235 890 aa21.39■■□□□ 1.02
ARID1A-201ENST00000324856 XPCQ01831 940 aaPredicted RBP21.39■■□□□ 1.02
ARID1A-201ENST00000324856 NACAP1Q9BZK3 213 aa21.39■■□□□ 1.01
ARID1A-201ENST00000324856 CCDC150Q8NCX0 1101 aa21.39■■□□□ 1.01
ARID1A-201ENST00000324856 FSD2A1L4K1 749 aa21.38■■□□□ 1.01
ARID1A-201ENST00000324856 CCDC94Q9BW85 323 aaPredicted RBP21.38■■□□□ 1.01
ARID1A-201ENST00000324856 TRAK1Q9UPV9 953 aa21.38■■□□□ 1.01
ARID1A-201ENST00000324856 STMN4Q9H169 189 aaPredicted RBP21.38■■□□□ 1.01
ARID1A-201ENST00000324856 SEPT11Q9NVA2 429 aaKnown RBP21.38■■□□□ 1.01
ARID1A-201ENST00000324856 HS1BP3Q53T59 392 aa21.38■■□□□ 1.01
ARID1A-201ENST00000324856 CEP135Q66GS9 1140 aa21.38■■□□□ 1.01
ARID1A-201ENST00000324856 RAPGEF2Q9Y4G8 1499 aa21.38■■□□□ 1.01
ARID1A-201ENST00000324856 TMCO5BA8MYB1 307 aa21.38■■□□□ 1.01
ARID1A-201ENST00000324856 TUBBP07437 444 aa21.38■■□□□ 1.01
ARID1A-201ENST00000324856 TMEM132AQ24JP5 1023 aa21.38■■□□□ 1.01
ARID1A-201ENST00000324856 GOPCQ9HD26 462 aa21.38■■□□□ 1.01
ARID1A-201ENST00000324856 HSF2BPO75031 334 aa21.37■■□□□ 1.01
ARID1A-201ENST00000324856 SREK1Q8WXA9 508 aaKnown RBP21.37■■□□□ 1.01
ARID1A-201ENST00000324856 ZNF428Q96B54 188 aa21.37■■□□□ 1.01
ARID1A-201ENST00000324856 RIC3Q7Z5B4 369 aa21.37■■□□□ 1.01
ARID1A-201ENST00000324856 DDX23Q9BUQ8 820 aaKnown RBP21.37■■□□□ 1.01
ARID1A-201ENST00000324856 CCDC69A6NI79 296 aa21.37■■□□□ 1.01
ARID1A-201ENST00000324856 DNAJC21Q5F1R6 531 aaKnown RBP21.37■■□□□ 1.01
ARID1A-201ENST00000324856 ATP2B1P20020 1258 aa21.37■■□□□ 1.01
ARID1A-201ENST00000324856 CHD1LQ86WJ1 897 aa21.37■■□□□ 1.01
ARID1A-201ENST00000324856 FYB1O15117 783 aa21.37■■□□□ 1.01
ARID1A-201ENST00000324856 SURF6O75683 361 aaKnown RBP21.37■■□□□ 1.01
ARID1A-201ENST00000324856 UVSSAQ2YD98 709 aa21.37■■□□□ 1.01
ARID1A-201ENST00000324856 EBAG9O00559 213 aa21.36■■□□□ 1.01
ARID1A-201ENST00000324856 KIF3CO14782 793 aa21.36■■□□□ 1.01
ARID1A-201ENST00000324856 CLGNO14967 610 aa21.36■■□□□ 1.01
ARID1A-201ENST00000324856 CKAP4Q07065 602 aaKnown RBP21.36■■□□□ 1.01
ARID1A-201ENST00000324856 BCCIPQ9P287 314 aaKnown RBP eCLIP21.36■■□□□ 1.017e-8■■□□□ 14.5
ARID1A-201ENST00000324856 CTNNA3Q9UI47 895 aa21.36■■□□□ 1.01
ARID1A-201ENST00000324856 SH2B1Q9NRF2 756 aaPredicted RBP21.36■■□□□ 1.01
ARID1A-201ENST00000324856 TOP2AP11388 1531 aaKnown RBP21.36■■□□□ 1.01
ARID1A-201ENST00000324856 UBE4AQ14139 1066 aa21.35■■□□□ 1.01
ARID1A-201ENST00000324856 GBP6Q6ZN66 633 aa21.35■■□□□ 1.01
ARID1A-201ENST00000324856 STX1AQ16623 288 aa21.35■■□□□ 1.01
ARID1A-201ENST00000324856 MPNDQ8N594 471 aa21.35■■□□□ 1.01
ARID1A-201ENST00000324856 FBF1Q8TES7 1133 aa21.35■■□□□ 1.01
ARID1A-201ENST00000324856 DHX29Q7Z478 1369 aaKnown RBP21.35■■□□□ 1.01
ARID1A-201ENST00000324856 HLTFQ14527 1009 aaKnown RBP eCLIP21.35■■□□□ 1.01
ARID1A-201ENST00000324856 ZSCAN25Q6NSZ9 544 aa21.35■■□□□ 1.01
ARID1A-201ENST00000324856 AK9Q5TCS8 1911 aa21.34■■□□□ 1.01
ARID1A-201ENST00000324856 RASSF4Q9H2L5 321 aa21.34■■□□□ 1.01
ARID1A-201ENST00000324856 ZFYP08048 801 aaPredicted RBP21.34■■□□□ 1.01
ARID1A-201ENST00000324856 IKQ13123 557 aaPredicted RBP21.34■■□□□ 1.01
ARID1A-201ENST00000324856 SARNPP82979 210 aaKnown RBP21.34■■□□□ 1.01
ARID1A-201ENST00000324856 YEATS4O95619 227 aa21.34■■□□□ 1.01
ARID1A-201ENST00000324856 CCDC6Q16204 474 aa21.34■■□□□ 1.01
ARID1A-201ENST00000324856 TTC14Q96N46 770 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms