RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 ZNF830Q96NB3 372 aaPredicted RBP9.5□□□□□ -0.89
CD46-201ENST00000322875 C1orf115Q9H7X2 142 aa9.5□□□□□ -0.89
CD46-201ENST00000322875 ATP10DQ9P241 1426 aa9.5□□□□□ -0.89
CD46-201ENST00000322875 VAMP4O75379 141 aa9.5□□□□□ -0.89
CD46-201ENST00000322875 PTMAP06454 111 aaKnown RBP9.5□□□□□ -0.89
CD46-201ENST00000322875 C17orf53Q8N3J3 647 aaPredicted RBP9.5□□□□□ -0.89
CD46-201ENST00000322875 TTC12Q9H892 705 aaPredicted RBP9.5□□□□□ -0.89
CD46-201ENST00000322875 RTL1A6NKG5 1358 aa9.49□□□□□ -0.89
CD46-201ENST00000322875 ABCA9Q8IUA7 1624 aa9.49□□□□□ -0.89
CD46-201ENST00000322875 FAM177BA6PVY3 158 aa9.49□□□□□ -0.89
CD46-201ENST00000322875 SYAP1Q96A49 352 aaPredicted RBP9.49□□□□□ -0.89
CD46-201ENST00000322875 INTS4Q96HW7 963 aaKnown RBP9.49□□□□□ -0.89
CD46-201ENST00000322875 KCNF1Q9H3M0 494 aa9.49□□□□□ -0.89
CD46-201ENST00000322875 ARAP3Q8WWN8 1544 aa9.49□□□□□ -0.89
CD46-201ENST00000322875 FAM135BQ49AJ0 1406 aa9.49□□□□□ -0.89
CD46-201ENST00000322875 RIOK3O14730 519 aaKnown RBP9.49□□□□□ -0.89
CD46-201ENST00000322875 ADCY5O95622 1261 aa9.49□□□□□ -0.89
CD46-201ENST00000322875 U2AF2P26368 475 aaKnown RBP eCLIP9.49□□□□□ -0.895e-9■■■□□ 14.8
CD46-201ENST00000322875 DNTTIP2Q5QJE6 756 aaKnown RBP9.49□□□□□ -0.89
CD46-201ENST00000322875 TMX3Q96JJ7 454 aa9.49□□□□□ -0.89
CD46-201ENST00000322875 FUCA2Q9BTY2 467 aa9.49□□□□□ -0.89
CD46-201ENST00000322875 OGFRQ9NZT2 677 aa9.49□□□□□ -0.89
CD46-201ENST00000322875 LMTK2Q8IWU2 1503 aa9.48□□□□□ -0.89
CD46-201ENST00000322875 SPDYE4A6NLX3 237 aa9.48□□□□□ -0.89
CD46-201ENST00000322875 PHF14O94880 888 aa9.48□□□□□ -0.89
CD46-201ENST00000322875 SDSP20132 328 aa9.48□□□□□ -0.89
CD46-201ENST00000322875 RPAP1Q9BWH6 1393 aaPredicted RBP9.48□□□□□ -0.89
CD46-201ENST00000322875 GABPB1Q06547 395 aaPredicted RBP9.48□□□□□ -0.89
CD46-201ENST00000322875 AEBP2Q6ZN18 517 aaPredicted RBP9.48□□□□□ -0.89
CD46-201ENST00000322875 C14orf93Q9H972 538 aaKnown RBP9.48□□□□□ -0.89
CD46-201ENST00000322875 USP25Q9UHP3 1055 aa9.48□□□□□ -0.89
CD46-201ENST00000322875 GADD45BO75293 160 aaPredicted RBP9.48□□□□□ -0.89
CD46-201ENST00000322875 ARHGEF40Q8TER5 1519 aa9.48□□□□□ -0.89
CD46-201ENST00000322875 KDM4AO75164 1064 aa9.47□□□□□ -0.89
CD46-201ENST00000322875 SLFN14P0C7P3 912 aa9.47□□□□□ -0.89
CD46-201ENST00000322875 C16orf71Q8IYS4 520 aaPredicted RBP9.47□□□□□ -0.89
CD46-201ENST00000322875 DIAPH3Q9NSV4 1193 aa9.47□□□□□ -0.89
CD46-201ENST00000322875 CTNNA3Q9UI47 895 aa9.47□□□□□ -0.89
CD46-201ENST00000322875 AP5Z1O43299 807 aa9.47□□□□□ -0.89
CD46-201ENST00000322875 ZNF853P0CG23 659 aa9.47□□□□□ -0.89
CD46-201ENST00000322875 MCM2P49736 904 aa9.47□□□□□ -0.89
CD46-201ENST00000322875 FAM53CQ9NYF3 392 aa9.47□□□□□ -0.89
CD46-201ENST00000322875 NCBP1Q09161 790 aaKnown RBP9.46□□□□□ -0.89
CD46-201ENST00000322875 CD163L1Q9NR16 1453 aa9.46□□□□□ -0.89
CD46-201ENST00000322875 RGS12O14924 1447 aa9.46□□□□□ -0.89
CD46-201ENST00000322875 REC8O95072 547 aa9.46□□□□□ -0.89
CD46-201ENST00000322875 OTUD7AQ8TE49 926 aaPredicted RBP9.46□□□□□ -0.89
CD46-201ENST00000322875 PYCARDQ9ULZ3 195 aa9.46□□□□□ -0.89
CD46-201ENST00000322875 NEO1Q92859 1461 aa9.46□□□□□ -0.9
CD46-201ENST00000322875 CLTCQ00610 1675 aaKnown RBP9.46□□□□□ -0.9
CD46-201ENST00000322875 SLC20A2Q08357 652 aa9.46□□□□□ -0.9
CD46-201ENST00000322875 USP48Q86UV5 1035 aa9.46□□□□□ -0.9
CD46-201ENST00000322875 DDX41Q9UJV9 622 aaKnown RBP9.46□□□□□ -0.9
CD46-201ENST00000322875 MORC2Q9Y6X9 1032 aaPredicted RBP9.46□□□□□ -0.9
CD46-201ENST00000322875 TCHHQ07283 1943 aa9.46□□□□□ -0.9
CD46-201ENST00000322875 CCDC183Q5T5S1 534 aa9.45□□□□□ -0.9
CD46-201ENST00000322875 ANKRD44Q8N8A2 993 aa9.45□□□□□ -0.9
CD46-201ENST00000322875 IPO4Q8TEX9 1081 aaKnown RBP9.45□□□□□ -0.9
CD46-201ENST00000322875 OSBPL3Q9H4L5 887 aa9.45□□□□□ -0.9
CD46-201ENST00000322875 ATP7AQ04656 1500 aa9.45□□□□□ -0.9
CD46-201ENST00000322875 A0A1W2PP64 1363 aa9.45□□□□□ -0.9
CD46-201ENST00000322875 CAMSAP1Q5T5Y3 1602 aa9.45□□□□□ -0.9
CD46-201ENST00000322875 ERC2O15083 957 aa9.45□□□□□ -0.9
CD46-201ENST00000322875 SMARCA5O60264 1052 aaPredicted RBP9.45□□□□□ -0.9
CD46-201ENST00000322875 MX1P20591 662 aa9.45□□□□□ -0.9
CD46-201ENST00000322875 TSPYL6Q8N831 410 aa9.45□□□□□ -0.9
CD46-201ENST00000322875 NAP1L2Q9ULW6 460 aaPredicted RBP9.45□□□□□ -0.9
CD46-201ENST00000322875 FRMPD1Q5SYB0 1578 aa9.45□□□□□ -0.9
CD46-201ENST00000322875 TPM3P06753 285 aa9.44□□□□□ -0.9
CD46-201ENST00000322875 KIF20BQ96Q89 1820 aa9.44□□□□□ -0.9
CD46-201ENST00000322875 FCHSD2O94868 740 aa9.44□□□□□ -0.9
CD46-201ENST00000322875 MPNDQ8N594 471 aa9.44□□□□□ -0.9
CD46-201ENST00000322875 TRAK1Q9UPV9 953 aa9.44□□□□□ -0.9
CD46-201ENST00000322875 U2SURPO15042 1029 aaKnown RBP9.43□□□□□ -0.9
CD46-201ENST00000322875 ATAD2Q6PL18 1390 aa9.43□□□□□ -0.9
CD46-201ENST00000322875 DLG5Q8TDM6 1919 aa9.43□□□□□ -0.9
CD46-201ENST00000322875 PIK3C2BO00750 1634 aa9.43□□□□□ -0.9
CD46-201ENST00000322875 ZFYVE9O95405 1425 aa9.43□□□□□ -0.9
CD46-201ENST00000322875 SPAG9O60271 1321 aaKnown RBP9.43□□□□□ -0.9
CD46-201ENST00000322875 HCLS1P14317 486 aaPredicted RBP9.43□□□□□ -0.9
CD46-201ENST00000322875 ANAPC15P60006 121 aa9.43□□□□□ -0.9
CD46-201ENST00000322875 EFCAB2Q5VUJ9 269 aa9.43□□□□□ -0.9
CD46-201ENST00000322875 CASC1Q6TDU7 716 aa9.43□□□□□ -0.9
CD46-201ENST00000322875 SALL3Q9BXA9 1300 aa9.43□□□□□ -0.9
CD46-201ENST00000322875 IGSF3O75054 1194 aa9.43□□□□□ -0.9
CD46-201ENST00000322875 NEK4P51957 841 aa9.43□□□□□ -0.9
CD46-201ENST00000322875 FOXD4L5Q5VV16 416 aaPredicted RBP9.43□□□□□ -0.9
CD46-201ENST00000322875 FOXD4L4Q8WXT5 416 aaPredicted RBP9.43□□□□□ -0.9
CD46-201ENST00000322875 IFT57Q9NWB7 429 aa9.43□□□□□ -0.9
CD46-201ENST00000322875 EVC2Q86UK5 1308 aa9.42□□□□□ -0.9
CD46-201ENST00000322875 ZBTB7CA1YPR0 619 aa9.42□□□□□ -0.9
CD46-201ENST00000322875 IRX5P78411 483 aaPredicted RBP9.42□□□□□ -0.9
CD46-201ENST00000322875 API5Q9BZZ5 524 aaKnown RBP9.42□□□□□ -0.9
CD46-201ENST00000322875 SSH2Q76I76 1423 aa9.42□□□□□ -0.9
CD46-201ENST00000322875 TULP2O00295 520 aa9.42□□□□□ -0.9
CD46-201ENST00000322875 TERF2Q15554 542 aa9.42□□□□□ -0.9
CD46-201ENST00000322875 CEP85Q6P2H3 762 aa9.42□□□□□ -0.9
CD46-201ENST00000322875 RPAP2Q8IXW5 612 aaPredicted RBP9.42□□□□□ -0.9
CD46-201ENST00000322875 CGNQ9P2M7 1197 aaKnown RBP9.42□□□□□ -0.9
CD46-201ENST00000322875 KIAA0232Q92628 1395 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms