RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 DDX54Q8TDD1 881 aaKnown RBP29.27■■■□□ 2.28
UBE2D3-201ENST00000321805 BTAF1O14981 1849 aa29.27■■■□□ 2.28
UBE2D3-201ENST00000321805 ACSBG1Q96GR2 724 aa29.26■■■□□ 2.27
UBE2D3-201ENST00000321805 POLKQ9UBT6 870 aa29.26■■■□□ 2.27
UBE2D3-201ENST00000321805 KAT6BQ8WYB5 2073 aa29.25■■■□□ 2.27
UBE2D3-201ENST00000321805 KIF7Q2M1P5 1343 aa29.25■■■□□ 2.27
UBE2D3-201ENST00000321805 PPM1GO15355 546 aaPredicted RBP29.24■■■□□ 2.27
UBE2D3-201ENST00000321805 TATP17735 454 aaPredicted RBP29.24■■■□□ 2.27
UBE2D3-201ENST00000321805 TXNRD1Q16881 649 aa29.24■■■□□ 2.27
UBE2D3-201ENST00000321805 PROM2Q8N271 834 aa29.24■■■□□ 2.27
UBE2D3-201ENST00000321805 USHBP1Q8N6Y0 703 aa29.24■■■□□ 2.27
UBE2D3-201ENST00000321805 KNSTRNQ9Y448 316 aa29.22■■■□□ 2.27
UBE2D3-201ENST00000321805 DOT1LQ8TEK3 1739 aa29.22■■■□□ 2.27
UBE2D3-201ENST00000321805 PCDH11XQ9BZA7 1347 aa29.2■■■□□ 2.26
UBE2D3-201ENST00000321805 PCDH11YQ9BZA8 1340 aa29.2■■■□□ 2.26
UBE2D3-201ENST00000321805 PKD1L3Q7Z443 1732 aa29.19■■■□□ 2.26
UBE2D3-201ENST00000321805 PLEKHG2Q9H7P9 1386 aa29.18■■■□□ 2.26
UBE2D3-201ENST00000321805 ANO8Q9HCE9 1232 aaPredicted RBP29.17■■■□□ 2.26
UBE2D3-201ENST00000321805 TNNT2P45379 298 aaPredicted RBP29.16■■■□□ 2.26
UBE2D3-201ENST00000321805 MORC1Q86VD1 984 aa29.15■■■□□ 2.26
UBE2D3-201ENST00000321805 PAPPAQ13219 1627 aa29.15■■■□□ 2.26
UBE2D3-201ENST00000321805 EYA1Q99502 592 aa29.14■■■□□ 2.26
UBE2D3-201ENST00000321805 CASZ1Q86V15 1759 aa29.13■■■□□ 2.25
UBE2D3-201ENST00000321805 STK32BQ9NY57 414 aa29.13■■■□□ 2.25
UBE2D3-201ENST00000321805 PRIM1P49642 420 aaKnown RBP29.12■■■□□ 2.25
UBE2D3-201ENST00000321805 EIF4A2Q14240 407 aaKnown RBP29.12■■■□□ 2.25
UBE2D3-201ENST00000321805 AMER1Q5JTC6 1135 aaPredicted RBP29.12■■■□□ 2.25
UBE2D3-201ENST00000321805 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.12■■■□□ 2.25
UBE2D3-201ENST00000321805 SLC27A3Q5K4L6 730 aa29.11■■■□□ 2.25
UBE2D3-201ENST00000321805 SYTL4Q96C24 671 aaPredicted RBP29.11■■■□□ 2.25
UBE2D3-201ENST00000321805 SLC15A2Q16348 729 aa29.1■■■□□ 2.25
UBE2D3-201ENST00000321805 LY75O60449 1722 aa29.09■■■□□ 2.25
UBE2D3-201ENST00000321805 SPG7Q9UQ90 795 aa29.09■■■□□ 2.25
UBE2D3-201ENST00000321805 SPON1Q9HCB6 807 aa29.08■■■□□ 2.25
UBE2D3-201ENST00000321805 IGSF1Q8N6C5 1336 aa29.08■■■□□ 2.25
UBE2D3-201ENST00000321805 CYP27B1O15528 508 aa29.07■■■□□ 2.24
UBE2D3-201ENST00000321805 PER1O15534 1290 aaPredicted RBP29.06■■■□□ 2.24
UBE2D3-201ENST00000321805 NPC1L1Q9UHC9 1359 aa29.04■■■□□ 2.24
UBE2D3-201ENST00000321805 NKX1-1Q15270 411 aaPredicted RBP29.04■■■□□ 2.24
UBE2D3-201ENST00000321805 LRRC4BQ9NT99 713 aa29.03■■■□□ 2.24
UBE2D3-201ENST00000321805 TOGARAM1Q9Y4F4 1720 aa29.03■■■□□ 2.24
UBE2D3-201ENST00000321805 QSER1Q2KHR3 1735 aa29.01■■■□□ 2.23
UBE2D3-201ENST00000321805 ITGB4P16144 1822 aa29■■■□□ 2.23
UBE2D3-201ENST00000321805 HMGB2P26583 209 aaKnown RBP29■■■□□ 2.23
UBE2D3-201ENST00000321805 IFNL2Q8IZJ0 200 aa28.98■■■□□ 2.23
UBE2D3-201ENST00000321805 ZNF827Q17R98 1081 aa28.96■■■□□ 2.23
UBE2D3-201ENST00000321805 AKT1S1Q96B36 256 aa28.96■■■□□ 2.23
UBE2D3-201ENST00000321805 PHKG2P15735 406 aa28.95■■■□□ 2.22
UBE2D3-201ENST00000321805 PDGFDQ9GZP0 370 aaPredicted RBP28.95■■■□□ 2.22
UBE2D3-201ENST00000321805 CCNL1Q9UK58 526 aaPredicted RBP28.95■■■□□ 2.22
UBE2D3-201ENST00000321805 KDRP35968 1356 aa28.94■■■□□ 2.22
UBE2D3-201ENST00000321805 MTFR1LQ9H019 292 aa28.94■■■□□ 2.22
UBE2D3-201ENST00000321805 PPP1R1BQ9UD71 204 aaPredicted RBP28.94■■■□□ 2.22
UBE2D3-201ENST00000321805 PALLDQ8WX93 1383 aa28.93■■■□□ 2.22
UBE2D3-201ENST00000321805 IL13P35225 146 aa28.93■■■□□ 2.22
UBE2D3-201ENST00000321805 MPRIPQ6WCQ1 1025 aa28.93■■■□□ 2.22
UBE2D3-201ENST00000321805 SMARCC1Q92922 1105 aaPredicted RBP28.93■■■□□ 2.22
UBE2D3-201ENST00000321805 ZBTB7AO95365 584 aa28.92■■■□□ 2.22
UBE2D3-201ENST00000321805 AMOTQ4VCS5 1084 aa28.92■■■□□ 2.22
UBE2D3-201ENST00000321805 PLEKHO1Q53GL0 409 aaPredicted RBP28.92■■■□□ 2.22
UBE2D3-201ENST00000321805 CC2D1BQ5T0F9 858 aaKnown RBP28.92■■■□□ 2.22
UBE2D3-201ENST00000321805 MTHFSP49914 203 aa28.91■■■□□ 2.22
UBE2D3-201ENST00000321805 HSP90AB1P08238 724 aaKnown RBP28.9■■■□□ 2.22
UBE2D3-201ENST00000321805 C5P01031 1676 aa28.89■■■□□ 2.22
UBE2D3-201ENST00000321805 TUBGCP6Q96RT7 1819 aa28.89■■■□□ 2.22
UBE2D3-201ENST00000321805 PTGER2P43116 358 aa28.88■■■□□ 2.21
UBE2D3-201ENST00000321805 SLC16A10Q8TF71 515 aa28.88■■■□□ 2.21
UBE2D3-201ENST00000321805 PIGBQ92521 554 aa28.88■■■□□ 2.21
UBE2D3-201ENST00000321805 TMOD3Q9NYL9 352 aa28.88■■■□□ 2.21
UBE2D3-201ENST00000321805 SULT6B1Q6IMI4 303 aa28.87■■■□□ 2.21
UBE2D3-201ENST00000321805 AEBP1Q8IUX7 1158 aa28.87■■■□□ 2.21
UBE2D3-201ENST00000321805 TFCP2L1Q9NZI6 479 aa28.87■■■□□ 2.21
UBE2D3-201ENST00000321805 TAF1LQ8IZX4 1826 aa28.87■■■□□ 2.21
UBE2D3-201ENST00000321805 KCNQ4P56696 695 aa28.86■■■□□ 2.21
UBE2D3-201ENST00000321805 DCAF5Q96JK2 942 aa28.85■■■□□ 2.21
UBE2D3-201ENST00000321805 PNPLA7Q6ZV29 1317 aa28.85■■■□□ 2.21
UBE2D3-201ENST00000321805 ERVV-2B6SEH9 535 aa28.84■■■□□ 2.21
UBE2D3-201ENST00000321805 SGIP1Q9BQI5 828 aa28.84■■■□□ 2.21
UBE2D3-201ENST00000321805 ATF5Q9Y2D1 282 aaPredicted RBP28.84■■■□□ 2.21
UBE2D3-201ENST00000321805 ZNF530Q6P9A1 599 aaPredicted RBP28.83■■■□□ 2.21
UBE2D3-201ENST00000321805 COL24A1Q17RW2 1714 aa28.83■■■□□ 2.21
UBE2D3-201ENST00000321805 DIAPH1O60610 1272 aaKnown RBP28.81■■■□□ 2.2
UBE2D3-201ENST00000321805 C1orf141Q5JVX7 400 aa28.81■■■□□ 2.2
UBE2D3-201ENST00000321805 KDM6AO15550 1401 aaPredicted RBP28.8■■■□□ 2.2
UBE2D3-201ENST00000321805 C4BP0C0L5 1744 aa28.8■■■□□ 2.2
UBE2D3-201ENST00000321805 COL3A1P02461 1466 aaPredicted RBP28.79■■■□□ 2.2
UBE2D3-201ENST00000321805 ZNF831Q5JPB2 1677 aa28.77■■■□□ 2.2
UBE2D3-201ENST00000321805 LOC102724428A0A0B4J2F2 783 aa28.77■■■□□ 2.2
UBE2D3-201ENST00000321805 SIK1P57059 783 aa28.77■■■□□ 2.2
UBE2D3-201ENST00000321805 FLAD1Q8NFF5 587 aa28.77■■■□□ 2.2
UBE2D3-201ENST00000321805 ATG3Q9NT62 314 aa28.75■■■□□ 2.19
UBE2D3-201ENST00000321805 ASAP1Q9ULH1 1129 aa28.75■■■□□ 2.19
UBE2D3-201ENST00000321805 MAP3K5Q99683 1374 aa28.75■■■□□ 2.19
UBE2D3-201ENST00000321805 ARXQ96QS3 562 aa28.74■■■□□ 2.19
UBE2D3-201ENST00000321805 SCN11AQ9UI33 1791 aa28.73■■■□□ 2.19
UBE2D3-201ENST00000321805 POLD1P28340 1107 aa28.73■■■□□ 2.19
UBE2D3-201ENST00000321805 AKAP4Q5JQC9 854 aa28.73■■■□□ 2.19
UBE2D3-201ENST00000321805 CABP4P57796 275 aa28.72■■■□□ 2.19
UBE2D3-201ENST00000321805 AK7Q96M32 723 aa28.72■■■□□ 2.19
UBE2D3-201ENST00000321805 UBR3Q6ZT12 1888 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms