RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 RUNDC1Q96C34 613 aa28■■■□□ 2.07
YBX1-201ENST00000321358 AMOTQ4VCS5 1084 aa27.99■■■□□ 2.07
YBX1-201ENST00000321358 CCDC146Q8IYE0 955 aa27.99■■■□□ 2.07
YBX1-201ENST00000321358 RGPD1P0DJD0 1748 aa27.99■■■□□ 2.07
YBX1-201ENST00000321358 RXRBP28702 533 aa27.98■■■□□ 2.07
YBX1-201ENST00000321358 SPG7Q9UQ90 795 aa27.98■■■□□ 2.07
YBX1-201ENST00000321358 EXOC5O00471 708 aa27.97■■■□□ 2.07
YBX1-201ENST00000321358 PLEKHF1Q96S99 279 aa27.97■■■□□ 2.07
YBX1-201ENST00000321358 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.97■■■□□ 2.075e-12■□□□□ 11.2
YBX1-201ENST00000321358 PLEKHG2Q9H7P9 1386 aa27.96■■■□□ 2.07
YBX1-201ENST00000321358 ZCRB1Q8TBF4 217 aaKnown RBP27.95■■■□□ 2.06
YBX1-201ENST00000321358 GAS2L2Q8NHY3 880 aa27.94■■■□□ 2.06
YBX1-201ENST00000321358 PHACTR3Q96KR7 559 aa27.94■■■□□ 2.06
YBX1-201ENST00000321358 DDB1Q16531 1140 aa27.93■■■□□ 2.06
YBX1-201ENST00000321358 RGPD2P0DJD1 1756 aa27.93■■■□□ 2.06
YBX1-201ENST00000321358 MEGF6O75095 1541 aa27.93■■■□□ 2.06
YBX1-201ENST00000321358 ONECUT3O60422 494 aaPredicted RBP27.92■■■□□ 2.06
YBX1-201ENST00000321358 OVOS2A0A0G2JMS6 1433 aa27.92■■■□□ 2.06
YBX1-201ENST00000321358 DISP2A7MBM2 1401 aa27.91■■■□□ 2.06
YBX1-201ENST00000321358 C1orf141Q5JVX7 400 aa27.9■■■□□ 2.06
YBX1-201ENST00000321358 ZNF530Q6P9A1 599 aaPredicted RBP27.9■■■□□ 2.06
YBX1-201ENST00000321358 MTHFSDQ2M296 383 aaKnown RBP27.89■■■□□ 2.06
YBX1-201ENST00000321358 SEPT12Q8IYM1 358 aa27.89■■■□□ 2.06
YBX1-201ENST00000321358 APAF1O14727 1248 aa27.88■■■□□ 2.05
YBX1-201ENST00000321358 PDE3BQ13370 1112 aa27.88■■■□□ 2.05
YBX1-201ENST00000321358 NFE2L2Q16236 605 aa27.88■■■□□ 2.05
YBX1-201ENST00000321358 PCDH11XQ9BZA7 1347 aa27.88■■■□□ 2.05
YBX1-201ENST00000321358 PCDH11YQ9BZA8 1340 aa27.88■■■□□ 2.05
YBX1-201ENST00000321358 DDX54Q8TDD1 881 aaKnown RBP27.87■■■□□ 2.05
YBX1-201ENST00000321358 GLI3P10071 1580 aa27.87■■■□□ 2.05
YBX1-201ENST00000321358 TMPOP42166 694 aaKnown RBP27.86■■■□□ 2.05
YBX1-201ENST00000321358 IFNL2Q8IZJ0 200 aa27.86■■■□□ 2.05
YBX1-201ENST00000321358 NEUROD2Q15784 382 aa27.85■■■□□ 2.05
YBX1-201ENST00000321358 RIPK4P57078 832 aa27.84■■■□□ 2.05
YBX1-201ENST00000321358 AKAP4Q5JQC9 854 aa27.84■■■□□ 2.05
YBX1-201ENST00000321358 HSP90AB1P08238 724 aaKnown RBP27.83■■■□□ 2.05
YBX1-201ENST00000321358 RTF1Q92541 710 aaKnown RBP27.83■■■□□ 2.05
YBX1-201ENST00000321358 LMOD3Q0VAK6 560 aa27.82■■■□□ 2.04
YBX1-201ENST00000321358 NGEFQ8N5V2 710 aa27.82■■■□□ 2.04
YBX1-201ENST00000321358 RRP7AQ9Y3A4 280 aaKnown RBP27.82■■■□□ 2.04
YBX1-201ENST00000321358 PARP4Q9UKK3 1724 aaKnown RBP27.82■■■□□ 2.04
YBX1-201ENST00000321358 TNS2Q63HR2 1409 aa27.82■■■□□ 2.04
YBX1-201ENST00000321358 GNAT3A8MTJ3 354 aa27.82■■■□□ 2.04
YBX1-201ENST00000321358 RGS12O14924 1447 aa27.81■■■□□ 2.04
YBX1-201ENST00000321358 CYP27B1O15528 508 aa27.81■■■□□ 2.04
YBX1-201ENST00000321358 PHKG2P15735 406 aa27.81■■■□□ 2.04
YBX1-201ENST00000321358 HTATSF1O43719 755 aaKnown RBP27.78■■■□□ 2.04
YBX1-201ENST00000321358 HNRNPUQ00839 825 aaKnown RBP eCLIP27.78■■■□□ 2.04
YBX1-201ENST00000321358 MAP3K5Q99683 1374 aa27.78■■■□□ 2.04
YBX1-201ENST00000321358 SENP3-EIF4A1A0A087X0R7 540 aa27.77■■■□□ 2.04
YBX1-201ENST00000321358 KRT27Q7Z3Y8 459 aa27.77■■■□□ 2.04
YBX1-201ENST00000321358 SALL2Q9Y467 1007 aaPredicted RBP27.77■■■□□ 2.04
YBX1-201ENST00000321358 NCBP3Q53F19 620 aaKnown RBP27.77■■■□□ 2.04
YBX1-201ENST00000321358 DCAF5Q96JK2 942 aa27.77■■■□□ 2.04
YBX1-201ENST00000321358 MARCH10Q8NA82 808 aaPredicted RBP27.76■■■□□ 2.03
YBX1-201ENST00000321358 THSD7AQ9UPZ6 1657 aa27.75■■■□□ 2.03
YBX1-201ENST00000321358 NKX1-1Q15270 411 aaPredicted RBP27.74■■■□□ 2.03
YBX1-201ENST00000321358 MPRIPQ6WCQ1 1025 aa27.74■■■□□ 2.03
YBX1-201ENST00000321358 CCDC27Q2M243 656 aa27.72■■■□□ 2.03
YBX1-201ENST00000321358 WNK3Q9BYP7 1800 aa27.72■■■□□ 2.03
YBX1-201ENST00000321358 PKD1L3Q7Z443 1732 aa27.72■■■□□ 2.03
YBX1-201ENST00000321358 LRRC37A3O60309 1634 aa27.71■■■□□ 2.03
YBX1-201ENST00000321358 CALD1Q05682 793 aaKnown RBP27.71■■■□□ 2.03
YBX1-201ENST00000321358 MCM10Q7L590 875 aa27.7■■■□□ 2.02
YBX1-201ENST00000321358 TRIM35Q9UPQ4 493 aa27.7■■■□□ 2.02
YBX1-201ENST00000321358 RNMTO43148 476 aaKnown RBP27.69■■■□□ 2.02
YBX1-201ENST00000321358 YTHDC1Q96MU7 727 aaKnown RBP27.69■■■□□ 2.02
YBX1-201ENST00000321358 TEFQ10587 303 aa27.68■■■□□ 2.02
YBX1-201ENST00000321358 DCTN1Q14203 1278 aa27.68■■■□□ 2.02
YBX1-201ENST00000321358 WWC1Q8IX03 1113 aa27.68■■■□□ 2.02
YBX1-201ENST00000321358 IL17REQ8NFR9 667 aa27.68■■■□□ 2.02
YBX1-201ENST00000321358 LGR6Q9HBX8 967 aa27.68■■■□□ 2.02
YBX1-201ENST00000321358 ERVV-2B6SEH9 535 aa27.67■■■□□ 2.02
YBX1-201ENST00000321358 FAM196AQ6ZSG2 479 aa27.67■■■□□ 2.02
YBX1-201ENST00000321358 CABP4P57796 275 aa27.66■■■□□ 2.02
YBX1-201ENST00000321358 FAM182BQ5T319 152 aa27.66■■■□□ 2.02
YBX1-201ENST00000321358 UPF1Q92900 1129 aaKnown RBP eCLIP27.65■■■□□ 2.02
YBX1-201ENST00000321358 SYTL4Q96C24 671 aaPredicted RBP27.64■■■□□ 2.02
YBX1-201ENST00000321358 WDR63Q8IWG1 891 aa27.63■■■□□ 2.01
YBX1-201ENST00000321358 THUMPD2Q9BTF0 503 aaKnown RBP27.63■■■□□ 2.01
YBX1-201ENST00000321358 CEMIPQ8WUJ3 1361 aa27.62■■■□□ 2.01
YBX1-201ENST00000321358 KDM6AO15550 1401 aaPredicted RBP27.62■■■□□ 2.01
YBX1-201ENST00000321358 ACSBG1Q96GR2 724 aa27.62■■■□□ 2.01
YBX1-201ENST00000321358 SLC52A2Q9HAB3 445 aa27.62■■■□□ 2.01
YBX1-201ENST00000321358 TMOD3Q9NYL9 352 aa27.62■■■□□ 2.01
YBX1-201ENST00000321358 PRIM1P49642 420 aaKnown RBP27.61■■■□□ 2.01
YBX1-201ENST00000321358 BCL9O00512 1426 aa27.6■■■□□ 2.01
YBX1-201ENST00000321358 TAF7Q15545 349 aaPredicted RBP27.6■■■□□ 2.01
YBX1-201ENST00000321358 NFATC2IPQ8NCF5 419 aa27.6■■■□□ 2.01
YBX1-201ENST00000321358 ZBED9Q6R2W3 1325 aa27.59■■■□□ 2.01
YBX1-201ENST00000321358 LAS1LQ9Y4W2 734 aaKnown RBP27.59■■■□□ 2.01
YBX1-201ENST00000321358 SHANK3Q9BYB0 1731 aa27.58■■■□□ 2.01
YBX1-201ENST00000321358 GOLGA2Q08379 1002 aa27.57■■■□□ 2
YBX1-201ENST00000321358 IL16Q14005 1332 aa27.57■■■□□ 2
YBX1-201ENST00000321358 BTBD11A6QL63 1104 aa27.56■■■□□ 2
YBX1-201ENST00000321358 GNAI1P63096 354 aa27.56■■■□□ 2
YBX1-201ENST00000321358 ZNF521Q96K83 1311 aa27.55■■■□□ 2
YBX1-201ENST00000321358 CFAP44Q96MT7 982 aa27.55■■■□□ 2
YBX1-201ENST00000321358 IFT57Q9NWB7 429 aa27.55■■■□□ 2
YBX1-201ENST00000321358 PIGBQ92521 554 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms