RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 CFAP70Q5T0N1 1121 aa19.74■□□□□ 0.75
PACS1-201ENST00000320580 TOMM22Q9NS69 142 aa19.74■□□□□ 0.75
PACS1-201ENST00000320580 SOX12O15370 315 aa19.73■□□□□ 0.75
PACS1-201ENST00000320580 HMOX1P09601 288 aa19.73■□□□□ 0.75
PACS1-201ENST00000320580 SYCP2Q9BX26 1530 aa19.73■□□□□ 0.75
PACS1-201ENST00000320580 MX1P20591 662 aa19.73■□□□□ 0.75
PACS1-201ENST00000320580 GTF2E1P29083 439 aaPredicted RBP19.73■□□□□ 0.75
PACS1-201ENST00000320580 FOSBP53539 338 aa19.73■□□□□ 0.75
PACS1-201ENST00000320580 FERMT3Q86UX7 667 aa19.73■□□□□ 0.75
PACS1-201ENST00000320580 GPT2Q8TD30 523 aa19.73■□□□□ 0.75
PACS1-201ENST00000320580 TMX1Q9H3N1 280 aa19.73■□□□□ 0.75
PACS1-201ENST00000320580 TERF2IPQ9NYB0 399 aa19.73■□□□□ 0.75
PACS1-201ENST00000320580 WDR7Q9Y4E6 1490 aa19.72■□□□□ 0.75
PACS1-201ENST00000320580 GTF3C6Q969F1 213 aa19.72■□□□□ 0.75
PACS1-201ENST00000320580 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.72■□□□□ 0.75
PACS1-201ENST00000320580 TRAPPC8Q9Y2L5 1435 aa19.72■□□□□ 0.75
PACS1-201ENST00000320580 TMPOP42166 694 aaKnown RBP19.72■□□□□ 0.75
PACS1-201ENST00000320580 UBE2HP62256 183 aa19.71■□□□□ 0.75
PACS1-201ENST00000320580 SDF4Q9BRK5 362 aa19.71■□□□□ 0.75
PACS1-201ENST00000320580 LARP6Q9BRS8 491 aaKnown RBP19.71■□□□□ 0.75
PACS1-201ENST00000320580 CNPY2Q9Y2B0 182 aa19.71■□□□□ 0.75
PACS1-201ENST00000320580 CEBPZQ03701 1054 aaKnown RBP19.71■□□□□ 0.75
PACS1-201ENST00000320580 TWISTNBQ3B726 338 aaPredicted RBP19.71■□□□□ 0.75
PACS1-201ENST00000320580 ABCA8O94911 1581 aa19.71■□□□□ 0.75
PACS1-201ENST00000320580 TESK2Q96S53 571 aa19.7■□□□□ 0.74
PACS1-201ENST00000320580 TCOF1Q13428 1488 aaKnown RBP19.7■□□□□ 0.74
PACS1-201ENST00000320580 LMAN1P49257 510 aa19.7■□□□□ 0.74
PACS1-201ENST00000320580 RASSF4Q9H2L5 321 aa19.7■□□□□ 0.74
PACS1-201ENST00000320580 H0YHG0 523 aa19.69■□□□□ 0.74
PACS1-201ENST00000320580 IBTKQ9P2D0 1353 aaPredicted RBP19.69■□□□□ 0.74
PACS1-201ENST00000320580 LARP1BQ659C4 914 aaKnown RBP19.69■□□□□ 0.74
PACS1-201ENST00000320580 TXLNBQ8N3L3 684 aa19.69■□□□□ 0.74
PACS1-201ENST00000320580 KIF2AO00139 706 aaPredicted RBP19.68■□□□□ 0.74
PACS1-201ENST00000320580 NAT10Q9H0A0 1025 aaKnown RBP19.68■□□□□ 0.74
PACS1-201ENST00000320580 TTC22Q5TAA0 569 aa19.68■□□□□ 0.74
PACS1-201ENST00000320580 RUFY2Q8WXA3 655 aa19.68■□□□□ 0.74
PACS1-201ENST00000320580 KINO60870 393 aaKnown RBP19.67■□□□□ 0.74
PACS1-201ENST00000320580 URI1O94763 535 aaPredicted RBP19.67■□□□□ 0.74
PACS1-201ENST00000320580 ACBD3Q9H3P7 528 aa19.67■□□□□ 0.74
PACS1-201ENST00000320580 CCDC191Q8NCU4 936 aa19.67■□□□□ 0.74
PACS1-201ENST00000320580 SPATA32Q96LK8 384 aa19.67■□□□□ 0.74
PACS1-201ENST00000320580 PRKAR2BP31323 418 aa19.66■□□□□ 0.74
PACS1-201ENST00000320580 PDLIM2Q96JY6 352 aa19.66■□□□□ 0.74
PACS1-201ENST00000320580 ZBTB40Q9NUA8 1239 aa19.66■□□□□ 0.74
PACS1-201ENST00000320580 PDCP20941 246 aa19.66■□□□□ 0.74
PACS1-201ENST00000320580 INSRP06213 1382 aa19.65■□□□□ 0.74
PACS1-201ENST00000320580 SLU7O95391 586 aaKnown RBP19.65■□□□□ 0.74
PACS1-201ENST00000320580 SDSP20132 328 aa19.65■□□□□ 0.74
PACS1-201ENST00000320580 ZNF165P49910 485 aa19.65■□□□□ 0.74
PACS1-201ENST00000320580 PDILTQ8N807 584 aa19.65■□□□□ 0.74
PACS1-201ENST00000320580 GPATCH3Q96I76 525 aa19.65■□□□□ 0.74
PACS1-201ENST00000320580 GADD45BO75293 160 aaPredicted RBP19.65■□□□□ 0.74
PACS1-201ENST00000320580 FKBP5Q13451 457 aaPredicted RBP19.65■□□□□ 0.74
PACS1-201ENST00000320580 CCDC83Q8IWF9 413 aa19.65■□□□□ 0.74
PACS1-201ENST00000320580 FAM200AQ8TCP9 573 aa19.65■□□□□ 0.74
PACS1-201ENST00000320580 RSPH14Q9UHP6 348 aa19.65■□□□□ 0.74
PACS1-201ENST00000320580 ITSN2Q9NZM3 1697 aa19.64■□□□□ 0.73
PACS1-201ENST00000320580 STX6O43752 255 aa19.64■□□□□ 0.73
PACS1-201ENST00000320580 C16orf71Q8IYS4 520 aaPredicted RBP19.64■□□□□ 0.73
PACS1-201ENST00000320580 NOC3LQ8WTT2 800 aaKnown RBP19.64■□□□□ 0.73
PACS1-201ENST00000320580 USP26Q9BXU7 913 aa19.64■□□□□ 0.73
PACS1-201ENST00000320580 EVC2Q86UK5 1308 aa19.64■□□□□ 0.73
PACS1-201ENST00000320580 SKILP12757 684 aa19.63■□□□□ 0.73
PACS1-201ENST00000320580 LRRFIP2Q9Y608 721 aaKnown RBP19.63■□□□□ 0.73
PACS1-201ENST00000320580 MAP4K4O95819 1239 aaPredicted RBP19.63■□□□□ 0.73
PACS1-201ENST00000320580 CREBRFQ8IUR6 639 aa19.63■□□□□ 0.73
PACS1-201ENST00000320580 THUMPD2Q9BTF0 503 aaKnown RBP19.63■□□□□ 0.73
PACS1-201ENST00000320580 CCP110O43303 1012 aa19.62■□□□□ 0.73
PACS1-201ENST00000320580 RDXP35241 583 aaKnown RBP19.62■□□□□ 0.73
PACS1-201ENST00000320580 SNW1Q13573 536 aaKnown RBP19.62■□□□□ 0.73
PACS1-201ENST00000320580 ELF2Q15723 593 aa19.62■□□□□ 0.73
PACS1-201ENST00000320580 CCDC171Q6TFL3 1326 aa19.62■□□□□ 0.73
PACS1-201ENST00000320580 CCDC102AQ96A19 550 aa19.62■□□□□ 0.73
PACS1-201ENST00000320580 ZNF521Q96K83 1311 aa19.62■□□□□ 0.73
PACS1-201ENST00000320580 ZMYM3Q14202 1370 aa19.62■□□□□ 0.73
PACS1-201ENST00000320580 KRBA2Q6ZNG9 492 aa19.62■□□□□ 0.73
PACS1-201ENST00000320580 ZNF692Q9BU19 519 aaPredicted RBP19.62■□□□□ 0.73
PACS1-201ENST00000320580 PYCARDQ9ULZ3 195 aa19.62■□□□□ 0.73
PACS1-201ENST00000320580 ALDH1L2Q3SY69 923 aa19.61■□□□□ 0.73
PACS1-201ENST00000320580 RPAP2Q8IXW5 612 aaPredicted RBP19.61■□□□□ 0.73
PACS1-201ENST00000320580 TRMT2AQ8IZ69 625 aaKnown RBP19.61■□□□□ 0.73
PACS1-201ENST00000320580 TMEM132EQ6IEE7 984 aa19.61■□□□□ 0.73
PACS1-201ENST00000320580 NECTIN2Q92692 538 aa19.61■□□□□ 0.73
PACS1-201ENST00000320580 EXOC6BQ9Y2D4 811 aa19.61■□□□□ 0.73
PACS1-201ENST00000320580 SFPQP23246 707 aaKnown RBP eCLIP19.6■□□□□ 0.73
PACS1-201ENST00000320580 NEMFO60524 1076 aa19.6■□□□□ 0.73
PACS1-201ENST00000320580 ANO6Q4KMQ2 910 aa19.6■□□□□ 0.73
PACS1-201ENST00000320580 LUZP1Q86V48 1076 aa19.6■□□□□ 0.73
PACS1-201ENST00000320580 EIF3JO75822 258 aaKnown RBP19.6■□□□□ 0.73
PACS1-201ENST00000320580 ZSCAN22P10073 491 aaPredicted RBP19.6■□□□□ 0.73
PACS1-201ENST00000320580 ZBTB9Q96C00 473 aa19.6■□□□□ 0.73
PACS1-201ENST00000320580 NSD3Q9BZ95 1437 aa19.59■□□□□ 0.73
PACS1-201ENST00000320580 TFIP11Q9UBB9 837 aaKnown RBP19.59■□□□□ 0.73
PACS1-201ENST00000320580 ARHGAP29Q52LW3 1261 aa19.59■□□□□ 0.73
PACS1-201ENST00000320580 C14orf37Q86TY3 774 aa19.59■□□□□ 0.73
PACS1-201ENST00000320580 NSFL1CQ9UNZ2 370 aaKnown RBP19.59■□□□□ 0.73
PACS1-201ENST00000320580 STK3Q13188 491 aa19.58■□□□□ 0.73
PACS1-201ENST00000320580 TSHZ3Q63HK5 1081 aa19.58■□□□□ 0.73
PACS1-201ENST00000320580 TTLL5Q6EMB2 1281 aa19.58■□□□□ 0.73
PACS1-201ENST00000320580 CEP57L1Q8IYX8 460 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms