RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 CAMKK2Q96RR4 588 aa12.89□□□□□ -0.35
KARS-202ENST00000319410 CARD14Q9BXL6 1004 aa12.89□□□□□ -0.35
KARS-202ENST00000319410 ERBB3P21860 1342 aa12.89□□□□□ -0.35
KARS-202ENST00000319410 WNK3Q9BYP7 1800 aa12.89□□□□□ -0.35
KARS-202ENST00000319410 R3HDM1Q15032 1099 aaKnown RBP12.89□□□□□ -0.35
KARS-202ENST00000319410 MARCH10Q8NA82 808 aaPredicted RBP12.89□□□□□ -0.35
KARS-202ENST00000319410 ANKRD24Q8TF21 1146 aa12.89□□□□□ -0.35
KARS-202ENST00000319410 GGNBP2Q9H3C7 697 aa12.89□□□□□ -0.35
KARS-202ENST00000319410 BRD2P25440 801 aaKnown RBP12.88□□□□□ -0.35
KARS-202ENST00000319410 COG3Q96JB2 828 aa12.88□□□□□ -0.35
KARS-202ENST00000319410 POLR3GLQ9BT43 218 aa12.88□□□□□ -0.35
KARS-202ENST00000319410 PANK3Q9H999 370 aa12.88□□□□□ -0.35
KARS-202ENST00000319410 NAP1L5Q96NT1 182 aaPredicted RBP12.88□□□□□ -0.35
KARS-202ENST00000319410 OVOS2A0A0G2JMS6 1433 aa12.88□□□□□ -0.35
KARS-202ENST00000319410 DISP2A7MBM2 1401 aa12.88□□□□□ -0.35
KARS-202ENST00000319410 NSD3Q9BZ95 1437 aa12.87□□□□□ -0.35
KARS-202ENST00000319410 PEAK1Q9H792 1746 aa12.87□□□□□ -0.35
KARS-202ENST00000319410 NAP1L2Q9ULW6 460 aaPredicted RBP12.87□□□□□ -0.35
KARS-202ENST00000319410 CGNL1Q0VF96 1302 aa12.87□□□□□ -0.35
KARS-202ENST00000319410 NSD2O96028 1365 aa12.86□□□□□ -0.35
KARS-202ENST00000319410 MAP3K19Q56UN5 1328 aa12.86□□□□□ -0.35
KARS-202ENST00000319410 FYB1O15117 783 aa12.86□□□□□ -0.35
KARS-202ENST00000319410 GSE1Q14687 1217 aa12.86□□□□□ -0.35
KARS-202ENST00000319410 RRS1Q15050 365 aaKnown RBP12.86□□□□□ -0.35
KARS-202ENST00000319410 CALD1Q05682 793 aaKnown RBP12.86□□□□□ -0.35
KARS-202ENST00000319410 EXOC5O00471 708 aa12.85□□□□□ -0.35
KARS-202ENST00000319410 HOMEZQ8IX15 550 aa12.85□□□□□ -0.35
KARS-202ENST00000319410 ABCC6O95255 1503 aa12.85□□□□□ -0.35
KARS-202ENST00000319410 PPM1GO15355 546 aaPredicted RBP12.84□□□□□ -0.35
KARS-202ENST00000319410 PAXIP1Q6ZW49 1069 aaPredicted RBP12.84□□□□□ -0.35
KARS-202ENST00000319410 IP6K1Q92551 441 aa12.84□□□□□ -0.35
KARS-202ENST00000319410 SBF2Q86WG5 1849 aa12.84□□□□□ -0.35
KARS-202ENST00000319410 AMPHP49418 695 aa12.84□□□□□ -0.35
KARS-202ENST00000319410 CDCA7Q9BWT1 371 aaPredicted RBP12.84□□□□□ -0.35
KARS-202ENST00000319410 KIF20BQ96Q89 1820 aa12.84□□□□□ -0.35
KARS-202ENST00000319410 NPC1L1Q9UHC9 1359 aa12.84□□□□□ -0.35
KARS-202ENST00000319410 PER1O15534 1290 aaPredicted RBP12.83□□□□□ -0.35
KARS-202ENST00000319410 KNSTRNQ9Y448 316 aa12.83□□□□□ -0.35
KARS-202ENST00000319410 KCNQ2O43526 872 aa12.83□□□□□ -0.36
KARS-202ENST00000319410 HOXC9P31274 260 aa12.83□□□□□ -0.36
KARS-202ENST00000319410 ACSBG1Q96GR2 724 aa12.83□□□□□ -0.36
KARS-202ENST00000319410 IL2RBP14784 551 aa12.82□□□□□ -0.36
KARS-202ENST00000319410 TNS2Q63HR2 1409 aa12.82□□□□□ -0.36
KARS-202ENST00000319410 NUP188Q5SRE5 1749 aa12.82□□□□□ -0.36
KARS-202ENST00000319410 RREB1Q92766 1687 aa12.81□□□□□ -0.36
KARS-202ENST00000319410 BBXQ8WY36 941 aaPredicted RBP12.81□□□□□ -0.36
KARS-202ENST00000319410 RGPD2P0DJD1 1756 aa12.81□□□□□ -0.36
KARS-202ENST00000319410 PRDM4Q9UKN5 801 aa12.81□□□□□ -0.36
KARS-202ENST00000319410 ANKRD26Q9UPS8 1709 aa12.8□□□□□ -0.36
KARS-202ENST00000319410 PARD3Q8TEW0 1356 aa12.8□□□□□ -0.36
KARS-202ENST00000319410 USHBP1Q8N6Y0 703 aa12.8□□□□□ -0.36
KARS-202ENST00000319410 IPO4Q8TEX9 1081 aaKnown RBP12.8□□□□□ -0.36
KARS-202ENST00000319410 PPP4R2Q9NY27 417 aa12.8□□□□□ -0.36
KARS-202ENST00000319410 KIF24Q5T7B8 1368 aa12.8□□□□□ -0.36
KARS-202ENST00000319410 AMER1Q5JTC6 1135 aaPredicted RBP12.8□□□□□ -0.36
KARS-202ENST00000319410 DDX54Q8TDD1 881 aaKnown RBP12.8□□□□□ -0.36
KARS-202ENST00000319410 HSP90AB2PQ58FF8 381 aa12.79□□□□□ -0.36
KARS-202ENST00000319410 PROM2Q8N271 834 aa12.79□□□□□ -0.36
KARS-202ENST00000319410 NBPF6Q5VWK0 638 aa12.78□□□□□ -0.36
KARS-202ENST00000319410 NBPF4Q96M43 638 aa12.78□□□□□ -0.36
KARS-202ENST00000319410 EMILIN1Q9Y6C2 1016 aa12.78□□□□□ -0.36
KARS-202ENST00000319410 KAT6BQ8WYB5 2073 aa12.77□□□□□ -0.36
KARS-202ENST00000319410 RTL1A6NKG5 1358 aa12.77□□□□□ -0.36
KARS-202ENST00000319410 PLSCR1O15162 318 aa12.77□□□□□ -0.37
KARS-202ENST00000319410 NBPF14Q5TI25 921 aa12.77□□□□□ -0.37
KARS-202ENST00000319410 NCLP19338 710 aaKnown RBP12.77□□□□□ -0.37
KARS-202ENST00000319410 TNNT2P45379 298 aaPredicted RBP12.77□□□□□ -0.37
KARS-202ENST00000319410 BCL9O00512 1426 aa12.76□□□□□ -0.37
KARS-202ENST00000319410 MEGF6O75095 1541 aa12.76□□□□□ -0.37
KARS-202ENST00000319410 LRP5O75197 1615 aa12.76□□□□□ -0.37
KARS-202ENST00000319410 FAM208AQ9UK61 1670 aaKnown RBP12.76□□□□□ -0.37
KARS-202ENST00000319410 CHMP4AQ9BY43 222 aa12.76□□□□□ -0.37
KARS-202ENST00000319410 PDGFDQ9GZP0 370 aaPredicted RBP12.76□□□□□ -0.37
KARS-202ENST00000319410 CANXP27824 592 aaKnown RBP12.75□□□□□ -0.37
KARS-202ENST00000319410 TXNRD1Q16881 649 aa12.75□□□□□ -0.37
KARS-202ENST00000319410 MORC1Q86VD1 984 aa12.75□□□□□ -0.37
KARS-202ENST00000319410 NHSQ6T4R5 1651 aa12.74□□□□□ -0.37
KARS-202ENST00000319410 SYTL4Q96C24 671 aaPredicted RBP12.74□□□□□ -0.37
KARS-202ENST00000319410 FLT4P35916 1363 aa12.73□□□□□ -0.37
KARS-202ENST00000319410 CNGB1Q14028 1251 aaPredicted RBP12.73□□□□□ -0.37
KARS-202ENST00000319410 RGPD3A6NKT7 1758 aaPredicted RBP12.73□□□□□ -0.37
KARS-202ENST00000319410 RGPD4Q7Z3J3 1758 aa12.73□□□□□ -0.37
KARS-202ENST00000319410 SMG6Q86US8 1419 aaKnown RBP12.73□□□□□ -0.37
KARS-202ENST00000319410 INSRP06213 1382 aa12.72□□□□□ -0.37
KARS-202ENST00000319410 BTAF1O14981 1849 aa12.72□□□□□ -0.37
KARS-202ENST00000319410 ZCRB1Q8TBF4 217 aaKnown RBP12.72□□□□□ -0.37
KARS-202ENST00000319410 PDCL3Q9H2J4 239 aa12.72□□□□□ -0.37
KARS-202ENST00000319410 CHMP4BQ9H444 224 aaKnown RBP12.72□□□□□ -0.37
KARS-202ENST00000319410 SHANK3Q9BYB0 1731 aa12.72□□□□□ -0.37
KARS-202ENST00000319410 PRIM1P49642 420 aaKnown RBP12.71□□□□□ -0.37
KARS-202ENST00000319410 KCNQ4P56696 695 aa12.71□□□□□ -0.37
KARS-202ENST00000319410 DDX10Q13206 875 aaKnown RBP12.71□□□□□ -0.37
KARS-202ENST00000319410 DHX37Q8IY37 1157 aaKnown RBP12.71□□□□□ -0.37
KARS-202ENST00000319410 GTF2E1P29083 439 aaPredicted RBP12.71□□□□□ -0.38
KARS-202ENST00000319410 RAPGEF4Q8WZA2 1011 aa12.71□□□□□ -0.38
KARS-202ENST00000319410 POLKQ9UBT6 870 aa12.71□□□□□ -0.38
KARS-202ENST00000319410 DOT1LQ8TEK3 1739 aa12.7□□□□□ -0.38
KARS-202ENST00000319410 MAP2P11137 1827 aaKnown RBP12.7□□□□□ -0.38
KARS-202ENST00000319410 RGS3P49796 1198 aa12.7□□□□□ -0.38
KARS-202ENST00000319410 ZBTB7AO95365 584 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms