RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 KCNQ2O43526 872 aa39.65■■■■□ 3.94
SYNGR1-202ENST00000318801 PTF1AQ7RTS3 328 aa39.65■■■■□ 3.94
SYNGR1-202ENST00000318801 EYA1Q99502 592 aa39.64■■■■□ 3.94
SYNGR1-202ENST00000318801 EIF4A2Q14240 407 aaKnown RBP39.63■■■■□ 3.93
SYNGR1-202ENST00000318801 CC2D1BQ5T0F9 858 aaKnown RBP39.62■■■■□ 3.93
SYNGR1-202ENST00000318801 PCDH11XQ9BZA7 1347 aa39.61■■■■□ 3.93
SYNGR1-202ENST00000318801 PCDH11YQ9BZA8 1340 aa39.61■■■■□ 3.93
SYNGR1-202ENST00000318801 RGPD3A6NKT7 1758 aaPredicted RBP39.6■■■■□ 3.93
SYNGR1-202ENST00000318801 RGPD4Q7Z3J3 1758 aa39.6■■■■□ 3.93
SYNGR1-202ENST00000318801 PSDA5PKW4 1024 aaPredicted RBP39.6■■■■□ 3.93
SYNGR1-202ENST00000318801 R3HDM1Q15032 1099 aaKnown RBP39.59■■■■□ 3.93
SYNGR1-202ENST00000318801 SPG7Q9UQ90 795 aa39.59■■■■□ 3.93
SYNGR1-202ENST00000318801 NHSQ6T4R5 1651 aa39.59■■■■□ 3.93
SYNGR1-202ENST00000318801 SYTL4Q96C24 671 aaPredicted RBP39.58■■■■□ 3.93
SYNGR1-202ENST00000318801 RREB1Q92766 1687 aa39.57■■■■□ 3.92
SYNGR1-202ENST00000318801 NPC1L1Q9UHC9 1359 aa39.56■■■■□ 3.92
SYNGR1-202ENST00000318801 NCAPD2Q15021 1401 aa39.54■■■■□ 3.92
SYNGR1-202ENST00000318801 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP39.54■■■■□ 3.92
SYNGR1-202ENST00000318801 PRIM1P49642 420 aaKnown RBP39.53■■■■□ 3.92
SYNGR1-202ENST00000318801 TXNRD1Q16881 649 aa39.52■■■■□ 3.92
SYNGR1-202ENST00000318801 NUP188Q5SRE5 1749 aa39.51■■■■□ 3.91
SYNGR1-202ENST00000318801 MTHFSP49914 203 aa39.5■■■■□ 3.91
SYNGR1-202ENST00000318801 CNGB1Q14028 1251 aaPredicted RBP39.5■■■■□ 3.91
SYNGR1-202ENST00000318801 SHANK3Q9BYB0 1731 aa39.49■■■■□ 3.91
SYNGR1-202ENST00000318801 IGSF1Q8N6C5 1336 aa39.48■■■■□ 3.91
SYNGR1-202ENST00000318801 SRCAPQ6ZRS2 3230 aa39.48■■■■□ 3.91
SYNGR1-202ENST00000318801 PROM2Q8N271 834 aa39.47■■■■□ 3.91
SYNGR1-202ENST00000318801 BTAF1O14981 1849 aa39.47■■■■□ 3.91
SYNGR1-202ENST00000318801 PLEKHG2Q9H7P9 1386 aa39.45■■■■□ 3.91
SYNGR1-202ENST00000318801 CYP27B1O15528 508 aa39.45■■■■□ 3.91
SYNGR1-202ENST00000318801 DOT1LQ8TEK3 1739 aa39.42■■■■□ 3.9
SYNGR1-202ENST00000318801 PKD1L3Q7Z443 1732 aa39.41■■■■□ 3.9
SYNGR1-202ENST00000318801 IFNL2Q8IZJ0 200 aa39.41■■■■□ 3.9
SYNGR1-202ENST00000318801 STK32BQ9NY57 414 aa39.41■■■■□ 3.9
SYNGR1-202ENST00000318801 PLEKHO1Q53GL0 409 aaPredicted RBP39.4■■■■□ 3.9
SYNGR1-202ENST00000318801 IL13P35225 146 aa39.39■■■■□ 3.9
SYNGR1-202ENST00000318801 AMOTQ4VCS5 1084 aa39.38■■■■□ 3.89
SYNGR1-202ENST00000318801 SLC27A3Q5K4L6 730 aa39.38■■■■□ 3.89
SYNGR1-202ENST00000318801 NKX1-1Q15270 411 aaPredicted RBP39.37■■■■□ 3.89
SYNGR1-202ENST00000318801 SULT6B1Q6IMI4 303 aa39.37■■■■□ 3.89
SYNGR1-202ENST00000318801 DIAPH1O60610 1272 aaKnown RBP39.36■■■■□ 3.89
SYNGR1-202ENST00000318801 HMGB2P26583 209 aaKnown RBP39.34■■■■□ 3.89
SYNGR1-202ENST00000318801 MPRIPQ6WCQ1 1025 aa39.34■■■■□ 3.89
SYNGR1-202ENST00000318801 PHKG2P15735 406 aa39.33■■■■□ 3.89
SYNGR1-202ENST00000318801 ZEB1P37275 1124 aaPredicted RBP39.33■■■■□ 3.89
SYNGR1-202ENST00000318801 HSP90AB1P08238 724 aaKnown RBP39.32■■■■□ 3.88
SYNGR1-202ENST00000318801 SLC15A2Q16348 729 aa39.31■■■■□ 3.88
SYNGR1-202ENST00000318801 CFAP53Q96M91 514 aa39.3■■■■□ 3.88
SYNGR1-202ENST00000318801 ANO8Q9HCE9 1232 aaPredicted RBP39.3■■■■□ 3.88
SYNGR1-202ENST00000318801 AEBP1Q8IUX7 1158 aa39.29■■■■□ 3.88
SYNGR1-202ENST00000318801 C1orf141Q5JVX7 400 aa39.27■■■■□ 3.88
SYNGR1-202ENST00000318801 SMARCC1Q92922 1105 aaPredicted RBP39.27■■■■□ 3.88
SYNGR1-202ENST00000318801 KDRP35968 1356 aa39.27■■■■□ 3.88
SYNGR1-202ENST00000318801 ZNF530Q6P9A1 599 aaPredicted RBP39.26■■■■□ 3.88
SYNGR1-202ENST00000318801 TMOD3Q9NYL9 352 aa39.26■■■■□ 3.88
SYNGR1-202ENST00000318801 LRRC4BQ9NT99 713 aa39.24■■■■□ 3.87
SYNGR1-202ENST00000318801 CCNL1Q9UK58 526 aaPredicted RBP39.24■■■■□ 3.87
SYNGR1-202ENST00000318801 LRP5O75197 1615 aa39.24■■■■□ 3.87
SYNGR1-202ENST00000318801 DCAF5Q96JK2 942 aa39.23■■■■□ 3.87
SYNGR1-202ENST00000318801 SPON1Q9HCB6 807 aa39.21■■■■□ 3.87
SYNGR1-202ENST00000318801 ITGB4P16144 1822 aa39.21■■■■□ 3.87
SYNGR1-202ENST00000318801 PIGBQ92521 554 aa39.21■■■■□ 3.87
SYNGR1-202ENST00000318801 U2SURPO15042 1029 aaKnown RBP39.2■■■■□ 3.87
SYNGR1-202ENST00000318801 HMOX1P09601 288 aa39.2■■■■□ 3.87
SYNGR1-202ENST00000318801 ERVV-2B6SEH9 535 aa39.19■■■■□ 3.86
SYNGR1-202ENST00000318801 NUDCQ9Y266 331 aa39.18■■■■□ 3.86
SYNGR1-202ENST00000318801 LY75O60449 1722 aa39.18■■■■□ 3.86
SYNGR1-202ENST00000318801 PPP2R1AP30153 589 aa39.17■■■■□ 3.86
SYNGR1-202ENST00000318801 PALLDQ8WX93 1383 aa39.17■■■■□ 3.86
SYNGR1-202ENST00000318801 TOGARAM1Q9Y4F4 1720 aa39.15■■■■□ 3.86
SYNGR1-202ENST00000318801 KCNQ4P56696 695 aa39.14■■■■□ 3.86
SYNGR1-202ENST00000318801 TFCP2L1Q9NZI6 479 aa39.13■■■■□ 3.85
SYNGR1-202ENST00000318801 CABP4P57796 275 aa39.11■■■■□ 3.85
SYNGR1-202ENST00000318801 AKT1S1Q96B36 256 aa39.11■■■■□ 3.85
SYNGR1-202ENST00000318801 AKAP4Q5JQC9 854 aa39.1■■■■□ 3.85
SYNGR1-202ENST00000318801 PPP1R1BQ9UD71 204 aaPredicted RBP39.1■■■■□ 3.85
SYNGR1-202ENST00000318801 PAPPAQ13219 1627 aa39.1■■■■□ 3.85
SYNGR1-202ENST00000318801 ZNF827Q17R98 1081 aa39.09■■■■□ 3.85
SYNGR1-202ENST00000318801 DDX10Q13206 875 aaKnown RBP39.08■■■■□ 3.85
SYNGR1-202ENST00000318801 COL3A1P02461 1466 aaPredicted RBP39.08■■■■□ 3.85
SYNGR1-202ENST00000318801 ZBTB7AO95365 584 aa39.06■■■■□ 3.84
SYNGR1-202ENST00000318801 PDGFDQ9GZP0 370 aaPredicted RBP39.06■■■■□ 3.84
SYNGR1-202ENST00000318801 ASAP1Q9ULH1 1129 aa39.05■■■■□ 3.84
SYNGR1-202ENST00000318801 CASZ1Q86V15 1759 aa39.04■■■■□ 3.84
SYNGR1-202ENST00000318801 MTFR1LQ9H019 292 aa39.04■■■■□ 3.84
SYNGR1-202ENST00000318801 LOC102724428A0A0B4J2F2 783 aa39.03■■■■□ 3.84
SYNGR1-202ENST00000318801 SIK1P57059 783 aa39.03■■■■□ 3.84
SYNGR1-202ENST00000318801 SLC16A10Q8TF71 515 aa39.01■■■■□ 3.84
SYNGR1-202ENST00000318801 ATG3Q9NT62 314 aa39.01■■■■□ 3.84
SYNGR1-202ENST00000318801 ATF5Q9Y2D1 282 aaPredicted RBP39.01■■■■□ 3.84
SYNGR1-202ENST00000318801 MTHFSDQ2M296 383 aaKnown RBP39■■■■□ 3.83
SYNGR1-202ENST00000318801 KDM6AO15550 1401 aaPredicted RBP38.99■■■■□ 3.83
SYNGR1-202ENST00000318801 U2AF1L5P0DN76 240 aaPredicted RBP38.99■■■■□ 3.83
SYNGR1-202ENST00000318801 U2AF1Q01081 240 aaKnown RBP eCLIP38.99■■■■□ 3.83
SYNGR1-202ENST00000318801 NFATC2IPQ8NCF5 419 aa38.99■■■■□ 3.83
SYNGR1-202ENST00000318801 RALBP1Q15311 655 aa38.98■■■■□ 3.83
SYNGR1-202ENST00000318801 GAS2L2Q8NHY3 880 aa38.98■■■■□ 3.83
SYNGR1-202ENST00000318801 ATP6V1AP38606 617 aa38.97■■■■□ 3.83
SYNGR1-202ENST00000318801 FLAD1Q8NFF5 587 aa38.97■■■■□ 3.83
SYNGR1-202ENST00000318801 C5P01031 1676 aa38.96■■■■□ 3.83
Retrieved 100 of 20,778 RNA–protein pairs in 164.8 ms