RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 NBPF6Q5VWK0 638 aa27.95■■■□□ 2.06
SERF1A-201ENST00000317633 NBPF4Q96M43 638 aa27.95■■■□□ 2.06
SERF1A-201ENST00000317633 LRRC4BQ9NT99 713 aa27.95■■■□□ 2.06
SERF1A-201ENST00000317633 MEGF6O75095 1541 aa27.95■■■□□ 2.06
SERF1A-201ENST00000317633 PRIM1P49642 420 aaKnown RBP27.94■■■□□ 2.06
SERF1A-201ENST00000317633 RAPGEF4Q8WZA2 1011 aa27.94■■■□□ 2.06
SERF1A-201ENST00000317633 KIF24Q5T7B8 1368 aa27.94■■■□□ 2.06
SERF1A-201ENST00000317633 CLSPNQ9HAW4 1339 aa27.93■■■□□ 2.06
SERF1A-201ENST00000317633 INSRP06213 1382 aa27.93■■■□□ 2.06
SERF1A-201ENST00000317633 FLT4P35916 1363 aa27.92■■■□□ 2.06
SERF1A-201ENST00000317633 ZNF827Q17R98 1081 aa27.92■■■□□ 2.06
SERF1A-201ENST00000317633 TATP17735 454 aaPredicted RBP27.91■■■□□ 2.06
SERF1A-201ENST00000317633 QSER1Q2KHR3 1735 aa27.91■■■□□ 2.06
SERF1A-201ENST00000317633 SGIP1Q9BQI5 828 aa27.9■■■□□ 2.06
SERF1A-201ENST00000317633 FHDC1Q9C0D6 1143 aaPredicted RBP27.9■■■□□ 2.06
SERF1A-201ENST00000317633 LY75O60449 1722 aa27.89■■■□□ 2.06
SERF1A-201ENST00000317633 HSP90AB2PQ58FF8 381 aa27.89■■■□□ 2.06
SERF1A-201ENST00000317633 USHBP1Q8N6Y0 703 aa27.89■■■□□ 2.06
SERF1A-201ENST00000317633 AKT1S1Q96B36 256 aa27.89■■■□□ 2.06
SERF1A-201ENST00000317633 SYT17Q9BSW7 474 aa27.89■■■□□ 2.06
SERF1A-201ENST00000317633 SLC16A10Q8TF71 515 aa27.88■■■□□ 2.05
SERF1A-201ENST00000317633 NSD3Q9BZ95 1437 aa27.88■■■□□ 2.05
SERF1A-201ENST00000317633 ARXQ96QS3 562 aa27.87■■■□□ 2.05
SERF1A-201ENST00000317633 CARD14Q9BXL6 1004 aa27.87■■■□□ 2.05
SERF1A-201ENST00000317633 NSD2O96028 1365 aa27.86■■■□□ 2.05
SERF1A-201ENST00000317633 PCGF6Q9BYE7 350 aa27.85■■■□□ 2.05
SERF1A-201ENST00000317633 TFCP2L1Q9NZI6 479 aa27.85■■■□□ 2.05
SERF1A-201ENST00000317633 PCDH11XQ9BZA7 1347 aa27.85■■■□□ 2.05
SERF1A-201ENST00000317633 PCDH11YQ9BZA8 1340 aa27.85■■■□□ 2.05
SERF1A-201ENST00000317633 CCNL1Q9UK58 526 aaPredicted RBP27.83■■■□□ 2.05
SERF1A-201ENST00000317633 HMGB2P26583 209 aaKnown RBP27.81■■■□□ 2.04
SERF1A-201ENST00000317633 POLD1P28340 1107 aa27.81■■■□□ 2.04
SERF1A-201ENST00000317633 KCNQ4P56696 695 aa27.81■■■□□ 2.04
SERF1A-201ENST00000317633 EMILIN1Q9Y6C2 1016 aa27.81■■■□□ 2.04
SERF1A-201ENST00000317633 PNPLA7Q6ZV29 1317 aa27.81■■■□□ 2.04
SERF1A-201ENST00000317633 TUBGCP6Q96RT7 1819 aa27.81■■■□□ 2.04
SERF1A-201ENST00000317633 MAP3K5Q99683 1374 aa27.8■■■□□ 2.04
SERF1A-201ENST00000317633 MAP2P11137 1827 aaKnown RBP27.8■■■□□ 2.04
SERF1A-201ENST00000317633 PPM1GO15355 546 aaPredicted RBP27.79■■■□□ 2.04
SERF1A-201ENST00000317633 COL24A1Q17RW2 1714 aa27.78■■■□□ 2.04
SERF1A-201ENST00000317633 ANKRD26Q9UPS8 1709 aa27.78■■■□□ 2.04
SERF1A-201ENST00000317633 CHD4Q14839 1912 aa27.76■■■□□ 2.03
SERF1A-201ENST00000317633 WASHC2AQ641Q2 1341 aa27.75■■■□□ 2.03
SERF1A-201ENST00000317633 POLR3GLQ9BT43 218 aa27.75■■■□□ 2.03
SERF1A-201ENST00000317633 PKD1L3Q7Z443 1732 aa27.75■■■□□ 2.03
SERF1A-201ENST00000317633 CYP27B1O15528 508 aa27.73■■■□□ 2.03
SERF1A-201ENST00000317633 MPRIPQ6WCQ1 1025 aa27.73■■■□□ 2.03
SERF1A-201ENST00000317633 ITGB4P16144 1822 aa27.73■■■□□ 2.03
SERF1A-201ENST00000317633 SPG7Q9UQ90 795 aa27.72■■■□□ 2.03
SERF1A-201ENST00000317633 C5P01031 1676 aa27.72■■■□□ 2.03
SERF1A-201ENST00000317633 EIF4G2P78344 907 aaKnown RBP eCLIP27.71■■■□□ 2.03
SERF1A-201ENST00000317633 NCAPD2Q15021 1401 aa27.71■■■□□ 2.03
SERF1A-201ENST00000317633 KLHL34Q8N239 644 aa27.71■■■□□ 2.03
SERF1A-201ENST00000317633 MSH5O43196 834 aa27.7■■■□□ 2.02
SERF1A-201ENST00000317633 SMARCC1Q92922 1105 aaPredicted RBP27.7■■■□□ 2.02
SERF1A-201ENST00000317633 PALLDQ8WX93 1383 aa27.7■■■□□ 2.02
SERF1A-201ENST00000317633 TAF1LQ8IZX4 1826 aa27.69■■■□□ 2.02
SERF1A-201ENST00000317633 TOGARAM1Q9Y4F4 1720 aa27.68■■■□□ 2.02
SERF1A-201ENST00000317633 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.68■■■□□ 2.02
SERF1A-201ENST00000317633 POLKQ9UBT6 870 aa27.68■■■□□ 2.02
SERF1A-201ENST00000317633 GPR162Q16538 588 aa27.67■■■□□ 2.02
SERF1A-201ENST00000317633 FLAD1Q8NFF5 587 aa27.67■■■□□ 2.02
SERF1A-201ENST00000317633 EYA1Q99502 592 aa27.67■■■□□ 2.02
SERF1A-201ENST00000317633 NKX1-1Q15270 411 aaPredicted RBP27.66■■■□□ 2.02
SERF1A-201ENST00000317633 COL23A1Q86Y22 540 aaPredicted RBP27.66■■■□□ 2.02
SERF1A-201ENST00000317633 HSPA5P11021 654 aaKnown RBP27.62■■■□□ 2.01
SERF1A-201ENST00000317633 TNNT2P45379 298 aaPredicted RBP27.62■■■□□ 2.01
SERF1A-201ENST00000317633 IFNL2Q8IZJ0 200 aa27.61■■■□□ 2.01
SERF1A-201ENST00000317633 ZNF784Q8NCA9 323 aaPredicted RBP27.61■■■□□ 2.01
SERF1A-201ENST00000317633 PIGBQ92521 554 aa27.61■■■□□ 2.01
SERF1A-201ENST00000317633 CCER1Q8TC90 406 aaPredicted RBP27.6■■■□□ 2.01
SERF1A-201ENST00000317633 PANK3Q9H999 370 aa27.6■■■□□ 2.01
SERF1A-201ENST00000317633 C4BP0C0L5 1744 aa27.6■■■□□ 2.01
SERF1A-201ENST00000317633 PLEKHG2Q9H7P9 1386 aa27.6■■■□□ 2.01
SERF1A-201ENST00000317633 EIF4A2Q14240 407 aaKnown RBP27.59■■■□□ 2.01
SERF1A-201ENST00000317633 AK7Q96M32 723 aa27.59■■■□□ 2.01
SERF1A-201ENST00000317633 TMOD3Q9NYL9 352 aa27.59■■■□□ 2.01
SERF1A-201ENST00000317633 PELP1Q8IZL8 1130 aaKnown RBP27.58■■■□□ 2.01
SERF1A-201ENST00000317633 PHKG2P15735 406 aa27.57■■■□□ 2
SERF1A-201ENST00000317633 UTRNP46939 3433 aa27.57■■■□□ 2
SERF1A-201ENST00000317633 MSL1Q68DK7 614 aa27.56■■■□□ 2
SERF1A-201ENST00000317633 NLGN2Q8NFZ4 835 aa27.55■■■□□ 2
SERF1A-201ENST00000317633 UBR3Q6ZT12 1888 aa27.55■■■□□ 2
SERF1A-201ENST00000317633 LOC102724428A0A0B4J2F2 783 aa27.54■■■□□ 2
SERF1A-201ENST00000317633 SIK1P57059 783 aa27.54■■■□□ 2
SERF1A-201ENST00000317633 IGSF1Q8N6C5 1336 aa27.52■■■□□ 2
SERF1A-201ENST00000317633 GRIN3BO60391 1043 aa27.5■■□□□ 1.99
SERF1A-201ENST00000317633 SSFA2P28290 1259 aa27.5■■□□□ 1.99
SERF1A-201ENST00000317633 MORC1Q86VD1 984 aa27.5■■□□□ 1.99
SERF1A-201ENST00000317633 ASAP1Q9ULH1 1129 aa27.5■■□□□ 1.99
SERF1A-201ENST00000317633 CD2APQ9Y5K6 639 aa27.5■■□□□ 1.99
SERF1A-201ENST00000317633 HSP90AB1P08238 724 aaKnown RBP27.49■■□□□ 1.99
SERF1A-201ENST00000317633 ATP6V1AP38606 617 aa27.49■■□□□ 1.99
SERF1A-201ENST00000317633 PLEKHO1Q53GL0 409 aaPredicted RBP27.49■■□□□ 1.99
SERF1A-201ENST00000317633 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.48■■□□□ 1.99
SERF1A-201ENST00000317633 PHF14O94880 888 aa27.48■■□□□ 1.99
SERF1A-201ENST00000317633 KNSTRNQ9Y448 316 aa27.48■■□□□ 1.99
SERF1A-201ENST00000317633 ERVV-2B6SEH9 535 aa27.47■■□□□ 1.99
SERF1A-201ENST00000317633 LINC00116Q8NCU8 138 aa27.47■■□□□ 1.99
SERF1A-201ENST00000317633 AMOTQ4VCS5 1084 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms