RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 USHBP1Q8N6Y0 703 aa24.39■■□□□ 1.49
EXOSC4-201ENST00000316052 SYTL4Q96C24 671 aaPredicted RBP24.39■■□□□ 1.49
EXOSC4-201ENST00000316052 CARD14Q9BXL6 1004 aa24.39■■□□□ 1.49
EXOSC4-201ENST00000316052 KCNQ4P56696 695 aa24.38■■□□□ 1.49
EXOSC4-201ENST00000316052 CDCA8Q53HL2 280 aa24.38■■□□□ 1.49
EXOSC4-201ENST00000316052 AKT1S1Q96B36 256 aa24.38■■□□□ 1.49
EXOSC4-201ENST00000316052 FHDC1Q9C0D6 1143 aaPredicted RBP24.38■■□□□ 1.49
EXOSC4-201ENST00000316052 HSP90AB2PQ58FF8 381 aa24.37■■□□□ 1.49
EXOSC4-201ENST00000316052 SLC27A3Q5K4L6 730 aa24.37■■□□□ 1.49
EXOSC4-201ENST00000316052 SYT17Q9BSW7 474 aa24.37■■□□□ 1.49
EXOSC4-201ENST00000316052 NSD2O96028 1365 aa24.36■■□□□ 1.49
EXOSC4-201ENST00000316052 DOT1LQ8TEK3 1739 aa24.35■■□□□ 1.49
EXOSC4-201ENST00000316052 KIF20BQ96Q89 1820 aa24.34■■□□□ 1.49
EXOSC4-201ENST00000316052 ARXQ96QS3 562 aa24.33■■□□□ 1.49
EXOSC4-201ENST00000316052 INSRP06213 1382 aa24.32■■□□□ 1.48
EXOSC4-201ENST00000316052 RAPGEF4Q8WZA2 1011 aa24.32■■□□□ 1.48
EXOSC4-201ENST00000316052 CGNL1Q0VF96 1302 aa24.32■■□□□ 1.48
EXOSC4-201ENST00000316052 TIMELESSQ9UNS1 1208 aa24.31■■□□□ 1.48
EXOSC4-201ENST00000316052 LY75O60449 1722 aa24.3■■□□□ 1.48
EXOSC4-201ENST00000316052 SMG6Q86US8 1419 aaKnown RBP24.3■■□□□ 1.48
EXOSC4-201ENST00000316052 PNPLA7Q6ZV29 1317 aa24.3■■□□□ 1.48
EXOSC4-201ENST00000316052 GOLGB1Q14789 3259 aaKnown RBP24.3■■□□□ 1.48
EXOSC4-201ENST00000316052 FLT4P35916 1363 aa24.29■■□□□ 1.48
EXOSC4-201ENST00000316052 NSD3Q9BZ95 1437 aa24.29■■□□□ 1.48
EXOSC4-201ENST00000316052 TATP17735 454 aaPredicted RBP24.29■■□□□ 1.48
EXOSC4-201ENST00000316052 EMILIN1Q9Y6C2 1016 aa24.29■■□□□ 1.48
EXOSC4-201ENST00000316052 TUBGCP6Q96RT7 1819 aa24.28■■□□□ 1.48
EXOSC4-201ENST00000316052 QSER1Q2KHR3 1735 aa24.28■■□□□ 1.48
EXOSC4-201ENST00000316052 TFCP2L1Q9NZI6 479 aa24.28■■□□□ 1.48
EXOSC4-201ENST00000316052 KIF24Q5T7B8 1368 aa24.28■■□□□ 1.48
EXOSC4-201ENST00000316052 SLC16A10Q8TF71 515 aa24.27■■□□□ 1.48
EXOSC4-201ENST00000316052 PCGF6Q9BYE7 350 aa24.27■■□□□ 1.48
EXOSC4-201ENST00000316052 CCNL1Q9UK58 526 aaPredicted RBP24.26■■□□□ 1.47
EXOSC4-201ENST00000316052 CYP27B1O15528 508 aa24.24■■□□□ 1.47
EXOSC4-201ENST00000316052 MAP3K5Q99683 1374 aa24.23■■□□□ 1.47
EXOSC4-201ENST00000316052 MAP2P11137 1827 aaKnown RBP24.22■■□□□ 1.47
EXOSC4-201ENST00000316052 COL24A1Q17RW2 1714 aa24.22■■□□□ 1.47
EXOSC4-201ENST00000316052 PCDH11XQ9BZA7 1347 aa24.22■■□□□ 1.47
EXOSC4-201ENST00000316052 PCDH11YQ9BZA8 1340 aa24.22■■□□□ 1.47
EXOSC4-201ENST00000316052 PPM1GO15355 546 aaPredicted RBP24.22■■□□□ 1.47
EXOSC4-201ENST00000316052 CLSPNQ9HAW4 1339 aa24.21■■□□□ 1.47
EXOSC4-201ENST00000316052 WASHC2AQ641Q2 1341 aa24.19■■□□□ 1.46
EXOSC4-201ENST00000316052 POLD1P28340 1107 aa24.19■■□□□ 1.46
EXOSC4-201ENST00000316052 MPRIPQ6WCQ1 1025 aa24.19■■□□□ 1.46
EXOSC4-201ENST00000316052 COL23A1Q86Y22 540 aaPredicted RBP24.19■■□□□ 1.46
EXOSC4-201ENST00000316052 POLR3GLQ9BT43 218 aa24.18■■□□□ 1.46
EXOSC4-201ENST00000316052 POLKQ9UBT6 870 aa24.18■■□□□ 1.46
EXOSC4-201ENST00000316052 NCAPD2Q15021 1401 aa24.18■■□□□ 1.46
EXOSC4-201ENST00000316052 CHD4Q14839 1912 aa24.18■■□□□ 1.46
EXOSC4-201ENST00000316052 KLHL34Q8N239 644 aa24.17■■□□□ 1.46
EXOSC4-201ENST00000316052 EYA1Q99502 592 aa24.17■■□□□ 1.46
EXOSC4-201ENST00000316052 ANKRD26Q9UPS8 1709 aa24.17■■□□□ 1.46
EXOSC4-201ENST00000316052 ITGB4P16144 1822 aa24.17■■□□□ 1.46
EXOSC4-201ENST00000316052 PKD1L3Q7Z443 1732 aa24.15■■□□□ 1.46
EXOSC4-201ENST00000316052 TOGARAM1Q9Y4F4 1720 aa24.15■■□□□ 1.46
EXOSC4-201ENST00000316052 MSH5O43196 834 aa24.15■■□□□ 1.46
EXOSC4-201ENST00000316052 ZNF784Q8NCA9 323 aaPredicted RBP24.15■■□□□ 1.46
EXOSC4-201ENST00000316052 PALLDQ8WX93 1383 aa24.15■■□□□ 1.46
EXOSC4-201ENST00000316052 NKX1-1Q15270 411 aaPredicted RBP24.14■■□□□ 1.45
EXOSC4-201ENST00000316052 TAF1LQ8IZX4 1826 aa24.13■■□□□ 1.45
EXOSC4-201ENST00000316052 NLGN2Q8NFZ4 835 aa24.13■■□□□ 1.45
EXOSC4-201ENST00000316052 PIGBQ92521 554 aa24.13■■□□□ 1.45
EXOSC4-201ENST00000316052 C5P01031 1676 aa24.13■■□□□ 1.45
EXOSC4-201ENST00000316052 TNNT2P45379 298 aaPredicted RBP24.12■■□□□ 1.45
EXOSC4-201ENST00000316052 GPR162Q16538 588 aa24.12■■□□□ 1.45
EXOSC4-201ENST00000316052 SPG7Q9UQ90 795 aa24.12■■□□□ 1.45
EXOSC4-201ENST00000316052 HSPA5P11021 654 aaKnown RBP24.11■■□□□ 1.45
EXOSC4-201ENST00000316052 MSL1Q68DK7 614 aa24.11■■□□□ 1.45
EXOSC4-201ENST00000316052 EIF4G2P78344 907 aaKnown RBP eCLIP24.09■■□□□ 1.45
EXOSC4-201ENST00000316052 EIF4A2Q14240 407 aaKnown RBP24.09■■□□□ 1.45
EXOSC4-201ENST00000316052 AMIGO3Q86WK7 504 aa24.09■■□□□ 1.45
EXOSC4-201ENST00000316052 SMARCC1Q92922 1105 aaPredicted RBP24.09■■□□□ 1.45
EXOSC4-201ENST00000316052 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.09■■□□□ 1.45
EXOSC4-201ENST00000316052 PANK3Q9H999 370 aa24.08■■□□□ 1.45
EXOSC4-201ENST00000316052 SMIM5Q71RC9 77 aa24.06■■□□□ 1.44
EXOSC4-201ENST00000316052 PELP1Q8IZL8 1130 aaKnown RBP24.06■■□□□ 1.44
EXOSC4-201ENST00000316052 PHKG2P15735 406 aa24.05■■□□□ 1.44
EXOSC4-201ENST00000316052 FLAD1Q8NFF5 587 aa24.05■■□□□ 1.44
EXOSC4-201ENST00000316052 C4BP0C0L5 1744 aa24.04■■□□□ 1.44
EXOSC4-201ENST00000316052 HMGB2P26583 209 aaKnown RBP24.04■■□□□ 1.44
EXOSC4-201ENST00000316052 IFNL2Q8IZJ0 200 aa24.04■■□□□ 1.44
EXOSC4-201ENST00000316052 ASAP1Q9ULH1 1129 aa24.04■■□□□ 1.44
EXOSC4-201ENST00000316052 LOC102724428A0A0B4J2F2 783 aa24.03■■□□□ 1.44
EXOSC4-201ENST00000316052 SIK1P57059 783 aa24.03■■□□□ 1.44
EXOSC4-201ENST00000316052 TMOD3Q9NYL9 352 aa24.03■■□□□ 1.44
EXOSC4-201ENST00000316052 LINC00116Q8NCU8 138 aa24.02■■□□□ 1.44
EXOSC4-201ENST00000316052 AK7Q96M32 723 aa24.02■■□□□ 1.44
EXOSC4-201ENST00000316052 UBR3Q6ZT12 1888 aa24.02■■□□□ 1.44
EXOSC4-201ENST00000316052 YBX3P16989 372 aaKnown RBP eCLIP24.01■■□□□ 1.43
EXOSC4-201ENST00000316052 PHF14O94880 888 aa24■■□□□ 1.43
EXOSC4-201ENST00000316052 CCER1Q8TC90 406 aaPredicted RBP24■■□□□ 1.43
EXOSC4-201ENST00000316052 IGSF1Q8N6C5 1336 aa24■■□□□ 1.43
EXOSC4-201ENST00000316052 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.99■■□□□ 1.43
EXOSC4-201ENST00000316052 ITPK1Q13572 414 aa23.99■■□□□ 1.43
EXOSC4-201ENST00000316052 ATG3Q9NT62 314 aa23.99■■□□□ 1.43
EXOSC4-201ENST00000316052 CD2APQ9Y5K6 639 aa23.97■■□□□ 1.43
EXOSC4-201ENST00000316052 ATP6V1AP38606 617 aa23.96■■□□□ 1.43
EXOSC4-201ENST00000316052 SSFA2P28290 1259 aa23.95■■□□□ 1.42
EXOSC4-201ENST00000316052 MORC1Q86VD1 984 aa23.95■■□□□ 1.42
EXOSC4-201ENST00000316052 GRIN3BO60391 1043 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms