RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 NUP188Q5SRE5 1749 aa17.41■□□□□ 0.38
CKS2-201ENST00000314355 PANK3Q9H999 370 aa17.4■□□□□ 0.38
CKS2-201ENST00000314355 ANO8Q9HCE9 1232 aaPredicted RBP17.4■□□□□ 0.38
CKS2-201ENST00000314355 EMILIN1Q9Y6C2 1016 aa17.4■□□□□ 0.38
CKS2-201ENST00000314355 RGPD3A6NKT7 1758 aaPredicted RBP17.4■□□□□ 0.38
CKS2-201ENST00000314355 RGPD4Q7Z3J3 1758 aa17.4■□□□□ 0.38
CKS2-201ENST00000314355 TNNT2P45379 298 aaPredicted RBP17.39■□□□□ 0.37
CKS2-201ENST00000314355 PCDH11XQ9BZA7 1347 aa17.39■□□□□ 0.37
CKS2-201ENST00000314355 PCDH11YQ9BZA8 1340 aa17.39■□□□□ 0.37
CKS2-201ENST00000314355 SPG7Q9UQ90 795 aa17.38■□□□□ 0.37
CKS2-201ENST00000314355 KNSTRNQ9Y448 316 aa17.38■□□□□ 0.37
CKS2-201ENST00000314355 WASHC2AQ641Q2 1341 aa17.38■□□□□ 0.37
CKS2-201ENST00000314355 SRCAPQ6ZRS2 3230 aa17.37■□□□□ 0.37
CKS2-201ENST00000314355 ZBTB7AO95365 584 aa17.37■□□□□ 0.37
CKS2-201ENST00000314355 ATF5Q9Y2D1 282 aaPredicted RBP17.37■□□□□ 0.37
CKS2-201ENST00000314355 KIF20BQ96Q89 1820 aa17.36■□□□□ 0.37
CKS2-201ENST00000314355 NHSQ6T4R5 1651 aa17.36■□□□□ 0.37
CKS2-201ENST00000314355 MORC1Q86VD1 984 aa17.35■□□□□ 0.37
CKS2-201ENST00000314355 MTFR1LQ9H019 292 aa17.35■□□□□ 0.37
CKS2-201ENST00000314355 TFCP2L1Q9NZI6 479 aa17.35■□□□□ 0.37
CKS2-201ENST00000314355 POLKQ9UBT6 870 aa17.35■□□□□ 0.37
CKS2-201ENST00000314355 CCNL1Q9UK58 526 aaPredicted RBP17.33■□□□□ 0.36
CKS2-201ENST00000314355 MEGF6O75095 1541 aa17.32■□□□□ 0.36
CKS2-201ENST00000314355 NSD2O96028 1365 aa17.32■□□□□ 0.36
CKS2-201ENST00000314355 MPRIPQ6WCQ1 1025 aa17.32■□□□□ 0.36
CKS2-201ENST00000314355 SLC16A10Q8TF71 515 aa17.32■□□□□ 0.36
CKS2-201ENST00000314355 EYA1Q99502 592 aa17.32■□□□□ 0.36
CKS2-201ENST00000314355 POLD1P28340 1107 aa17.31■□□□□ 0.36
CKS2-201ENST00000314355 SMARCC1Q92922 1105 aaPredicted RBP17.31■□□□□ 0.36
CKS2-201ENST00000314355 LRRC4BQ9NT99 713 aa17.31■□□□□ 0.36
CKS2-201ENST00000314355 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.31■□□□□ 0.36
CKS2-201ENST00000314355 MSH5O43196 834 aa17.3■□□□□ 0.36
CKS2-201ENST00000314355 IFNL2Q8IZJ0 200 aa17.3■□□□□ 0.36
CKS2-201ENST00000314355 PDGFDQ9GZP0 370 aaPredicted RBP17.3■□□□□ 0.36
CKS2-201ENST00000314355 MYOM1P52179 1685 aa17.29■□□□□ 0.36
CKS2-201ENST00000314355 BTAF1O14981 1849 aa17.28■□□□□ 0.36
CKS2-201ENST00000314355 RGPD2P0DJD1 1756 aa17.28■□□□□ 0.36
CKS2-201ENST00000314355 EIF4A2Q14240 407 aaKnown RBP17.28■□□□□ 0.36
CKS2-201ENST00000314355 AKT1S1Q96B36 256 aa17.28■□□□□ 0.36
CKS2-201ENST00000314355 CYP27B1O15528 508 aa17.27■□□□□ 0.36
CKS2-201ENST00000314355 ZNF827Q17R98 1081 aa17.27■□□□□ 0.36
CKS2-201ENST00000314355 PLEKHO1Q53GL0 409 aaPredicted RBP17.27■□□□□ 0.36
CKS2-201ENST00000314355 ARXQ96QS3 562 aa17.27■□□□□ 0.36
CKS2-201ENST00000314355 MAP2P11137 1827 aaKnown RBP17.26■□□□□ 0.35
CKS2-201ENST00000314355 KCNQ4P56696 695 aa17.26■□□□□ 0.35
CKS2-201ENST00000314355 FLAD1Q8NFF5 587 aa17.26■□□□□ 0.35
CKS2-201ENST00000314355 HSP90AB1P08238 724 aaKnown RBP17.25■□□□□ 0.35
CKS2-201ENST00000314355 PTGER2P43116 358 aa17.25■□□□□ 0.35
CKS2-201ENST00000314355 NKX1-1Q15270 411 aaPredicted RBP17.25■□□□□ 0.35
CKS2-201ENST00000314355 AMOTQ4VCS5 1084 aa17.25■□□□□ 0.35
CKS2-201ENST00000314355 TMOD3Q9NYL9 352 aa17.25■□□□□ 0.35
CKS2-201ENST00000314355 SYT17Q9BSW7 474 aa17.24■□□□□ 0.35
CKS2-201ENST00000314355 KLHL34Q8N239 644 aa17.23■□□□□ 0.35
CKS2-201ENST00000314355 FHDC1Q9C0D6 1143 aaPredicted RBP17.23■□□□□ 0.35
CKS2-201ENST00000314355 PALLDQ8WX93 1383 aa17.23■□□□□ 0.35
CKS2-201ENST00000314355 PHKG2P15735 406 aa17.22■□□□□ 0.35
CKS2-201ENST00000314355 YY1P25490 414 aa17.22■□□□□ 0.35
CKS2-201ENST00000314355 KIF7Q2M1P5 1343 aa17.21■□□□□ 0.35
CKS2-201ENST00000314355 DOT1LQ8TEK3 1739 aa17.21■□□□□ 0.35
CKS2-201ENST00000314355 PLEKHG2Q9H7P9 1386 aa17.21■□□□□ 0.35
CKS2-201ENST00000314355 C1orf141Q5JVX7 400 aa17.21■□□□□ 0.35
CKS2-201ENST00000314355 PIGBQ92521 554 aa17.21■□□□□ 0.35
CKS2-201ENST00000314355 AK7Q96M32 723 aa17.21■□□□□ 0.35
CKS2-201ENST00000314355 PNPLA7Q6ZV29 1317 aa17.21■□□□□ 0.34
CKS2-201ENST00000314355 CASZ1Q86V15 1759 aa17.2■□□□□ 0.34
CKS2-201ENST00000314355 IGSF1Q8N6C5 1336 aa17.2■□□□□ 0.34
CKS2-201ENST00000314355 DCAF5Q96JK2 942 aa17.19■□□□□ 0.34
CKS2-201ENST00000314355 ERVV-2B6SEH9 535 aa17.18■□□□□ 0.34
CKS2-201ENST00000314355 ATP6V1AP38606 617 aa17.18■□□□□ 0.34
CKS2-201ENST00000314355 CABP4P57796 275 aa17.18■□□□□ 0.34
CKS2-201ENST00000314355 SULT6B1Q6IMI4 303 aa17.18■□□□□ 0.34
CKS2-201ENST00000314355 ZNF530Q6P9A1 599 aaPredicted RBP17.18■□□□□ 0.34
CKS2-201ENST00000314355 SGIP1Q9BQI5 828 aa17.18■□□□□ 0.34
CKS2-201ENST00000314355 NCAPD2Q15021 1401 aa17.18■□□□□ 0.34
CKS2-201ENST00000314355 LOC102724428A0A0B4J2F2 783 aa17.17■□□□□ 0.34
CKS2-201ENST00000314355 MTHFSP49914 203 aa17.17■□□□□ 0.34
CKS2-201ENST00000314355 SIK1P57059 783 aa17.17■□□□□ 0.34
CKS2-201ENST00000314355 CC2D1BQ5T0F9 858 aaKnown RBP17.17■□□□□ 0.34
CKS2-201ENST00000314355 COL23A1Q86Y22 540 aaPredicted RBP17.17■□□□□ 0.34
CKS2-201ENST00000314355 ANKRD26Q9UPS8 1709 aa17.17■□□□□ 0.34
CKS2-201ENST00000314355 SHANK3Q9BYB0 1731 aa17.16■□□□□ 0.34
CKS2-201ENST00000314355 GPR162Q16538 588 aa17.16■□□□□ 0.34
CKS2-201ENST00000314355 AMER1Q5JTC6 1135 aaPredicted RBP17.16■□□□□ 0.34
CKS2-201ENST00000314355 PAPPAQ13219 1627 aa17.15■□□□□ 0.34
CKS2-201ENST00000314355 CNGB1Q14028 1251 aaPredicted RBP17.15■□□□□ 0.34
CKS2-201ENST00000314355 LY75O60449 1722 aa17.14■□□□□ 0.33
CKS2-201ENST00000314355 RBM42Q9BTD8 480 aaKnown RBP17.14■□□□□ 0.33
CKS2-201ENST00000314355 ASAP1Q9ULH1 1129 aa17.14■□□□□ 0.33
CKS2-201ENST00000314355 DIAPH1O60610 1272 aaKnown RBP17.13■□□□□ 0.33
CKS2-201ENST00000314355 PHF14O94880 888 aa17.13■□□□□ 0.33
CKS2-201ENST00000314355 IL13P35225 146 aa17.13■□□□□ 0.33
CKS2-201ENST00000314355 PELP1Q8IZL8 1130 aaKnown RBP17.13■□□□□ 0.33
CKS2-201ENST00000314355 PER1O15534 1290 aaPredicted RBP17.12■□□□□ 0.33
CKS2-201ENST00000314355 ATG3Q9NT62 314 aa17.12■□□□□ 0.33
CKS2-201ENST00000314355 PKD1L3Q7Z443 1732 aa17.12■□□□□ 0.33
CKS2-201ENST00000314355 SSFA2P28290 1259 aa17.11■□□□□ 0.33
CKS2-201ENST00000314355 MSL1Q68DK7 614 aa17.11■□□□□ 0.33
CKS2-201ENST00000314355 MAP3K5Q99683 1374 aa17.11■□□□□ 0.33
CKS2-201ENST00000314355 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.1■□□□□ 0.33
CKS2-201ENST00000314355 GNPATO15228 680 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms