RNA–Protein interactions for RNA: ENST00000313597.9

GMPPA-201, Transcript of GDP-mannose pyrophosphorylase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GMPPA, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMPPA-201ENST00000313597 NPC1L1Q9UHC9 1359 aa28.82■■■□□ 2.2
GMPPA-201ENST00000313597 CC2D1BQ5T0F9 858 aaKnown RBP28.82■■■□□ 2.2
GMPPA-201ENST00000313597 SBF2Q86WG5 1849 aa28.81■■■□□ 2.2
GMPPA-201ENST00000313597 ACSBG1Q96GR2 724 aa28.81■■■□□ 2.2
GMPPA-201ENST00000313597 NCAPD2Q15021 1401 aa28.81■■■□□ 2.2
GMPPA-201ENST00000313597 MTHFSP49914 203 aa28.75■■■□□ 2.19
GMPPA-201ENST00000313597 IGSF1Q8N6C5 1336 aa28.74■■■□□ 2.19
GMPPA-201ENST00000313597 PROM2Q8N271 834 aa28.74■■■□□ 2.19
GMPPA-201ENST00000313597 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.74■■■□□ 2.19
GMPPA-201ENST00000313597 PCDH11XQ9BZA7 1347 aa28.73■■■□□ 2.19
GMPPA-201ENST00000313597 PCDH11YQ9BZA8 1340 aa28.73■■■□□ 2.19
GMPPA-201ENST00000313597 SPG7Q9UQ90 795 aa28.72■■■□□ 2.19
GMPPA-201ENST00000313597 PRIM1P49642 420 aaKnown RBP28.71■■■□□ 2.19
GMPPA-201ENST00000313597 NBPF14Q5TI25 921 aa28.71■■■□□ 2.19
GMPPA-201ENST00000313597 PSDA5PKW4 1024 aaPredicted RBP28.7■■■□□ 2.19
GMPPA-201ENST00000313597 CYP27B1O15528 508 aa28.7■■■□□ 2.19
GMPPA-201ENST00000313597 IL13P35225 146 aa28.7■■■□□ 2.19
GMPPA-201ENST00000313597 CNGB1Q14028 1251 aaPredicted RBP28.7■■■□□ 2.19
GMPPA-201ENST00000313597 R3HDM1Q15032 1099 aaKnown RBP28.69■■■□□ 2.18
GMPPA-201ENST00000313597 NHSQ6T4R5 1651 aa28.69■■■□□ 2.18
GMPPA-201ENST00000313597 TXNRD1Q16881 649 aa28.69■■■□□ 2.18
GMPPA-201ENST00000313597 SYTL4Q96C24 671 aaPredicted RBP28.67■■■□□ 2.18
GMPPA-201ENST00000313597 KAT6BQ8WYB5 2073 aa28.67■■■□□ 2.18
GMPPA-201ENST00000313597 SRCAPQ6ZRS2 3230 aa28.66■■■□□ 2.18
GMPPA-201ENST00000313597 PLEKHG2Q9H7P9 1386 aa28.66■■■□□ 2.18
GMPPA-201ENST00000313597 SHANK3Q9BYB0 1731 aa28.66■■■□□ 2.18
GMPPA-201ENST00000313597 RREB1Q92766 1687 aa28.66■■■□□ 2.18
GMPPA-201ENST00000313597 RGPD3A6NKT7 1758 aaPredicted RBP28.65■■■□□ 2.18
GMPPA-201ENST00000313597 RGPD4Q7Z3J3 1758 aa28.65■■■□□ 2.18
GMPPA-201ENST00000313597 NKX1-1Q15270 411 aaPredicted RBP28.65■■■□□ 2.18
GMPPA-201ENST00000313597 ZEB1P37275 1124 aaPredicted RBP28.63■■■□□ 2.17
GMPPA-201ENST00000313597 SULT6B1Q6IMI4 303 aa28.62■■■□□ 2.17
GMPPA-201ENST00000313597 AEBP1Q8IUX7 1158 aa28.61■■■□□ 2.17
GMPPA-201ENST00000313597 IFNL2Q8IZJ0 200 aa28.61■■■□□ 2.17
GMPPA-201ENST00000313597 NUP188Q5SRE5 1749 aa28.61■■■□□ 2.17
GMPPA-201ENST00000313597 DIAPH1O60610 1272 aaKnown RBP28.6■■■□□ 2.17
GMPPA-201ENST00000313597 PLEKHO1Q53GL0 409 aaPredicted RBP28.6■■■□□ 2.17
GMPPA-201ENST00000313597 PHKG2P15735 406 aa28.59■■■□□ 2.17
GMPPA-201ENST00000313597 PKD1L3Q7Z443 1732 aa28.59■■■□□ 2.17
GMPPA-201ENST00000313597 AMOTQ4VCS5 1084 aa28.59■■■□□ 2.17
GMPPA-201ENST00000313597 KDRP35968 1356 aa28.58■■■□□ 2.17
GMPPA-201ENST00000313597 BTAF1O14981 1849 aa28.57■■■□□ 2.16
GMPPA-201ENST00000313597 ANO8Q9HCE9 1232 aaPredicted RBP28.57■■■□□ 2.16
GMPPA-201ENST00000313597 SLC27A3Q5K4L6 730 aa28.56■■■□□ 2.16
GMPPA-201ENST00000313597 MPRIPQ6WCQ1 1025 aa28.54■■■□□ 2.16
GMPPA-201ENST00000313597 LRRC4BQ9NT99 713 aa28.54■■■□□ 2.16
GMPPA-201ENST00000313597 DOT1LQ8TEK3 1739 aa28.54■■■□□ 2.16
GMPPA-201ENST00000313597 PPP2R1AP30153 589 aa28.53■■■□□ 2.16
GMPPA-201ENST00000313597 STK32BQ9NY57 414 aa28.53■■■□□ 2.16
GMPPA-201ENST00000313597 SLC15A2Q16348 729 aa28.52■■■□□ 2.16
GMPPA-201ENST00000313597 ZNF530Q6P9A1 599 aaPredicted RBP28.52■■■□□ 2.16
GMPPA-201ENST00000313597 HSP90AB1P08238 724 aaKnown RBP28.51■■■□□ 2.15
GMPPA-201ENST00000313597 PIGBQ92521 554 aa28.51■■■□□ 2.15
GMPPA-201ENST00000313597 CFAP53Q96M91 514 aa28.51■■■□□ 2.15
GMPPA-201ENST00000313597 HMOX1P09601 288 aa28.5■■■□□ 2.15
GMPPA-201ENST00000313597 DCAF5Q96JK2 942 aa28.49■■■□□ 2.15
GMPPA-201ENST00000313597 DDX10Q13206 875 aaKnown RBP28.48■■■□□ 2.15
GMPPA-201ENST00000313597 COL3A1P02461 1466 aaPredicted RBP28.48■■■□□ 2.15
GMPPA-201ENST00000313597 ERVV-2B6SEH9 535 aa28.47■■■□□ 2.15
GMPPA-201ENST00000313597 C1orf141Q5JVX7 400 aa28.47■■■□□ 2.15
GMPPA-201ENST00000313597 SMARCC1Q92922 1105 aaPredicted RBP28.47■■■□□ 2.15
GMPPA-201ENST00000313597 TMOD3Q9NYL9 352 aa28.47■■■□□ 2.15
GMPPA-201ENST00000313597 KCNQ4P56696 695 aa28.46■■■□□ 2.15
GMPPA-201ENST00000313597 CCNL1Q9UK58 526 aaPredicted RBP28.46■■■□□ 2.15
GMPPA-201ENST00000313597 U2SURPO15042 1029 aaKnown RBP28.45■■■□□ 2.15
GMPPA-201ENST00000313597 PALLDQ8WX93 1383 aa28.43■■■□□ 2.14
GMPPA-201ENST00000313597 AKT1S1Q96B36 256 aa28.43■■■□□ 2.14
GMPPA-201ENST00000313597 NUDCQ9Y266 331 aa28.43■■■□□ 2.14
GMPPA-201ENST00000313597 TOGARAM1Q9Y4F4 1720 aa28.42■■■□□ 2.14
GMPPA-201ENST00000313597 HMGB2P26583 209 aaKnown RBP28.42■■■□□ 2.14
GMPPA-201ENST00000313597 ZNF827Q17R98 1081 aa28.42■■■□□ 2.14
GMPPA-201ENST00000313597 AKAP4Q5JQC9 854 aa28.41■■■□□ 2.14
GMPPA-201ENST00000313597 PDGFDQ9GZP0 370 aaPredicted RBP28.41■■■□□ 2.14
GMPPA-201ENST00000313597 ASAP1Q9ULH1 1129 aa28.4■■■□□ 2.14
GMPPA-201ENST00000313597 PAPPAQ13219 1627 aa28.39■■■□□ 2.14
GMPPA-201ENST00000313597 LY75O60449 1722 aa28.39■■■□□ 2.14
GMPPA-201ENST00000313597 ITGB4P16144 1822 aa28.39■■■□□ 2.13
GMPPA-201ENST00000313597 CABP4P57796 275 aa28.38■■■□□ 2.13
GMPPA-201ENST00000313597 MTHFSDQ2M296 383 aaKnown RBP28.38■■■□□ 2.13
GMPPA-201ENST00000313597 SPON1Q9HCB6 807 aa28.38■■■□□ 2.13
GMPPA-201ENST00000313597 KDM6AO15550 1401 aaPredicted RBP28.38■■■□□ 2.13
GMPPA-201ENST00000313597 LRP5O75197 1615 aa28.38■■■□□ 2.13
GMPPA-201ENST00000313597 ATG3Q9NT62 314 aa28.38■■■□□ 2.13
GMPPA-201ENST00000313597 RALBP1Q15311 655 aa28.37■■■□□ 2.13
GMPPA-201ENST00000313597 TFCP2L1Q9NZI6 479 aa28.35■■■□□ 2.13
GMPPA-201ENST00000313597 LOC102724428A0A0B4J2F2 783 aa28.34■■■□□ 2.13
GMPPA-201ENST00000313597 SIK1P57059 783 aa28.34■■■□□ 2.13
GMPPA-201ENST00000313597 U2AF1L5P0DN76 240 aaPredicted RBP28.33■■■□□ 2.13
GMPPA-201ENST00000313597 U2AF1Q01081 240 aaKnown RBP eCLIP28.33■■■□□ 2.131e-6■■□□□ 12.9
GMPPA-201ENST00000313597 NFATC2IPQ8NCF5 419 aa28.33■■■□□ 2.13
GMPPA-201ENST00000313597 ZBTB7AO95365 584 aa28.33■■■□□ 2.13
GMPPA-201ENST00000313597 RSPH6AQ9H0K4 717 aa28.33■■■□□ 2.13
GMPPA-201ENST00000313597 LGR6Q9HBX8 967 aa28.33■■■□□ 2.13
GMPPA-201ENST00000313597 RNMTO43148 476 aaKnown RBP28.31■■■□□ 2.12
GMPPA-201ENST00000313597 FCHSD2O94868 740 aa28.31■■■□□ 2.12
GMPPA-201ENST00000313597 PRKAR2BP31323 418 aa28.3■■■□□ 2.12
GMPPA-201ENST00000313597 GAS2L2Q8NHY3 880 aa28.3■■■□□ 2.12
GMPPA-201ENST00000313597 CASZ1Q86V15 1759 aa28.3■■■□□ 2.12
GMPPA-201ENST00000313597 MTFR1LQ9H019 292 aa28.29■■■□□ 2.12
GMPPA-201ENST00000313597 PNPLA7Q6ZV29 1317 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms