RNA–Protein interactions for RNA: ENST00000310325.9

CTSF-201, Transcript of cathepsin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSF, Length 2,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-201ENST00000310325 ESCO1Q5FWF5 840 aa29.01■■■□□ 2.23
CTSF-201ENST00000310325 RTF1Q92541 710 aaKnown RBP29.01■■■□□ 2.23
CTSF-201ENST00000310325 SMC5Q8IY18 1101 aa29■■■□□ 2.23
CTSF-201ENST00000310325 NFAT5O94916 1531 aa29■■■□□ 2.23
CTSF-201ENST00000310325 LRRC37A3O60309 1634 aa28.99■■■□□ 2.23
CTSF-201ENST00000310325 ZBTB7BO15156 539 aaPredicted RBP28.99■■■□□ 2.23
CTSF-201ENST00000310325 PSME1Q06323 249 aa28.97■■■□□ 2.23
CTSF-201ENST00000310325 KRT24Q2M2I5 525 aa28.96■■■□□ 2.23
CTSF-201ENST00000310325 HTATSF1O43719 755 aaKnown RBP28.95■■■□□ 2.23
CTSF-201ENST00000310325 PHRF1Q9P1Y6 1649 aaKnown RBP28.94■■■□□ 2.22
CTSF-201ENST00000310325 LTV1Q96GA3 475 aaPredicted RBP28.92■■■□□ 2.22
CTSF-201ENST00000310325 IP6K1Q92551 441 aa28.91■■■□□ 2.22
CTSF-201ENST00000310325 TSPYL4Q9UJ04 414 aa28.91■■■□□ 2.22
CTSF-201ENST00000310325 KCNH5Q8NCM2 988 aa28.91■■■□□ 2.22
CTSF-201ENST00000310325 RGS12O14924 1447 aa28.89■■■□□ 2.22
CTSF-201ENST00000310325 USP19O94966 1318 aa28.89■■■□□ 2.22
CTSF-201ENST00000310325 GNAT3A8MTJ3 354 aa28.89■■■□□ 2.21
CTSF-201ENST00000310325 ORAI2Q96SN7 254 aa28.88■■■□□ 2.21
CTSF-201ENST00000310325 MIS18AQ9NYP9 233 aa28.88■■■□□ 2.21
CTSF-201ENST00000310325 MAP3K5Q99683 1374 aa28.88■■■□□ 2.21
CTSF-201ENST00000310325 KIF1AQ12756 1690 aa28.88■■■□□ 2.21
CTSF-201ENST00000310325 SEC24BO95487 1268 aa28.87■■■□□ 2.21
CTSF-201ENST00000310325 PTPRCP08575 1304 aa28.87■■■□□ 2.21
CTSF-201ENST00000310325 NUCB1Q02818 461 aa28.87■■■□□ 2.21
CTSF-201ENST00000310325 C1orf115Q9H7X2 142 aa28.87■■■□□ 2.21
CTSF-201ENST00000310325 TRPM3Q9HCF6 1732 aaPredicted RBP28.86■■■□□ 2.21
CTSF-201ENST00000310325 INTS3Q68E01 1043 aaKnown RBP28.86■■■□□ 2.21
CTSF-201ENST00000310325 PROSER2Q86WR7 435 aaPredicted RBP28.86■■■□□ 2.21
CTSF-201ENST00000310325 SLIT3O75094 1523 aa28.86■■■□□ 2.21
CTSF-201ENST00000310325 MSH6P52701 1360 aa28.85■■■□□ 2.21
CTSF-201ENST00000310325 GCC1Q96CN9 775 aa28.84■■■□□ 2.21
CTSF-201ENST00000310325 USHBP1Q8N6Y0 703 aa28.83■■■□□ 2.21
CTSF-201ENST00000310325 RGPD2P0DJD1 1756 aa28.82■■■□□ 2.2
CTSF-201ENST00000310325 CHD1LQ86WJ1 897 aa28.81■■■□□ 2.2
CTSF-201ENST00000310325 C1orf167Q5SNV9 1468 aa28.81■■■□□ 2.2
CTSF-201ENST00000310325 FAM208AQ9UK61 1670 aaKnown RBP28.8■■■□□ 2.2
CTSF-201ENST00000310325 SLC4A2P04920 1241 aa28.8■■■□□ 2.2
CTSF-201ENST00000310325 SIRT2Q8IXJ6 389 aa28.8■■■□□ 2.2
CTSF-201ENST00000310325 DAXXQ9UER7 740 aaPredicted RBP28.8■■■□□ 2.2
CTSF-201ENST00000310325 XPCQ01831 940 aaPredicted RBP28.79■■■□□ 2.2
CTSF-201ENST00000310325 UPF2Q9HAU5 1272 aaKnown RBP28.79■■■□□ 2.2
CTSF-201ENST00000310325 NBPF6Q5VWK0 638 aa28.79■■■□□ 2.2
CTSF-201ENST00000310325 IL17REQ8NFR9 667 aa28.79■■■□□ 2.2
CTSF-201ENST00000310325 NBPF4Q96M43 638 aa28.79■■■□□ 2.2
CTSF-201ENST00000310325 LNPKQ9C0E8 428 aa28.79■■■□□ 2.2
CTSF-201ENST00000310325 C19orf44Q9H6X5 657 aa28.79■■■□□ 2.2
CTSF-201ENST00000310325 NBR1Q14596 966 aa28.78■■■□□ 2.2
CTSF-201ENST00000310325 BABAM1Q9NWV8 329 aa28.78■■■□□ 2.2
CTSF-201ENST00000310325 ZBTB7CA1YPR0 619 aa28.77■■■□□ 2.2
CTSF-201ENST00000310325 GCP02774 474 aa28.77■■■□□ 2.2
CTSF-201ENST00000310325 CACNA1FO60840 1977 aa28.75■■■□□ 2.19
CTSF-201ENST00000310325 TAF7Q15545 349 aaPredicted RBP28.75■■■□□ 2.19
CTSF-201ENST00000310325 ARHGEF25Q86VW2 580 aa28.75■■■□□ 2.19
CTSF-201ENST00000310325 SOS1Q07889 1333 aaPredicted RBP28.75■■■□□ 2.19
CTSF-201ENST00000310325 SLC4A3P48751 1232 aa28.74■■■□□ 2.19
CTSF-201ENST00000310325 KRT28Q7Z3Y7 464 aa28.74■■■□□ 2.19
CTSF-201ENST00000310325 ANKRD45Q5TZF3 282 aa28.74■■■□□ 2.19
CTSF-201ENST00000310325 STRCP1A6NGW2 1772 aa28.73■■■□□ 2.19
CTSF-201ENST00000310325 LMO7Q8WWI1 1683 aa28.73■■■□□ 2.19
CTSF-201ENST00000310325 STK31Q9BXU1 1019 aa28.73■■■□□ 2.19
CTSF-201ENST00000310325 ALS2Q96Q42 1657 aa28.73■■■□□ 2.19
CTSF-201ENST00000310325 MED1Q15648 1581 aaPredicted RBP28.73■■■□□ 2.19
CTSF-201ENST00000310325 ATP10DQ9P241 1426 aa28.73■■■□□ 2.19
CTSF-201ENST00000310325 CEMIPQ8WUJ3 1361 aa28.72■■■□□ 2.19
CTSF-201ENST00000310325 TBC1D32Q96NH3 1257 aa28.72■■■□□ 2.19
CTSF-201ENST00000310325 MST1RQ04912 1400 aa28.72■■■□□ 2.19
CTSF-201ENST00000310325 LMOD2Q6P5Q4 547 aa28.72■■■□□ 2.19
CTSF-201ENST00000310325 NCAPD2Q15021 1401 aa28.71■■■□□ 2.19
CTSF-201ENST00000310325 G2E3Q7L622 706 aa28.71■■■□□ 2.19
CTSF-201ENST00000310325 CAMTA1Q9Y6Y1 1673 aa28.71■■■□□ 2.19
CTSF-201ENST00000310325 CCDC30Q5VVM6 783 aa28.7■■■□□ 2.19
CTSF-201ENST00000310325 LRRC59Q96AG4 307 aaKnown RBP28.7■■■□□ 2.18
CTSF-201ENST00000310325 ANKRD44Q8N8A2 993 aa28.69■■■□□ 2.18
CTSF-201ENST00000310325 DCCP43146 1447 aa28.69■■■□□ 2.18
CTSF-201ENST00000310325 RPAP2Q8IXW5 612 aaPredicted RBP28.68■■■□□ 2.18
CTSF-201ENST00000310325 TMEM94Q12767 1356 aa28.68■■■□□ 2.18
CTSF-201ENST00000310325 NCOA3Q9Y6Q9 1424 aa28.67■■■□□ 2.18
CTSF-201ENST00000310325 KDM3BQ7LBC6 1761 aa28.67■■■□□ 2.18
CTSF-201ENST00000310325 CCT4P50991 539 aaKnown RBP28.67■■■□□ 2.18
CTSF-201ENST00000310325 ATF3P18847 181 aa28.66■■■□□ 2.18
CTSF-201ENST00000310325 MEIS3Q99687 375 aa28.66■■■□□ 2.18
CTSF-201ENST00000310325 DCTPP1Q9H773 170 aa28.66■■■□□ 2.18
CTSF-201ENST00000310325 PLEKHG5O94827 1062 aa28.65■■■□□ 2.18
CTSF-201ENST00000310325 CEP85Q6P2H3 762 aa28.65■■■□□ 2.18
CTSF-201ENST00000310325 BMP2KLQ5H9B9 411 aa28.65■■■□□ 2.18
CTSF-201ENST00000310325 ANKRD24Q8TF21 1146 aa28.65■■■□□ 2.18
CTSF-201ENST00000310325 N4BP2Q86UW6 1770 aaPredicted RBP28.65■■■□□ 2.18
CTSF-201ENST00000310325 RGPD5Q99666 1765 aa28.64■■■□□ 2.18
CTSF-201ENST00000310325 PLEKHO1Q53GL0 409 aaPredicted RBP28.64■■■□□ 2.18
CTSF-201ENST00000310325 F6X3S4 739 aa28.64■■■□□ 2.17
CTSF-201ENST00000310325 FLIIQ13045 1269 aa28.64■■■□□ 2.17
CTSF-201ENST00000310325 RTL5Q5HYW3 569 aaPredicted RBP28.64■■■□□ 2.17
CTSF-201ENST00000310325 AKAP4Q5JQC9 854 aa28.64■■■□□ 2.17
CTSF-201ENST00000310325 SLC4A10Q6U841 1118 aa28.63■■■□□ 2.17
CTSF-201ENST00000310325 BECN1Q14457 450 aa28.62■■■□□ 2.17
CTSF-201ENST00000310325 AMOTQ4VCS5 1084 aa28.62■■■□□ 2.17
CTSF-201ENST00000310325 ZNF530Q6P9A1 599 aaPredicted RBP28.62■■■□□ 2.17
CTSF-201ENST00000310325 MFAP1P55081 439 aaKnown RBP28.61■■■□□ 2.17
CTSF-201ENST00000310325 LGR6Q9HBX8 967 aa28.61■■■□□ 2.17
CTSF-201ENST00000310325 FKBP5Q13451 457 aaPredicted RBP28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms