RNA–Protein interactions for RNA: ENST00000309755.8

KLHL3-201, Transcript of kelch like family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL3, Length 6,806 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-201ENST00000309755 ZHX1Q9UKY1 873 aaPredicted RBP12.99□□□□□ -0.33
KLHL3-201ENST00000309755 SFPQP23246 707 aaKnown RBP eCLIP12.99□□□□□ -0.33
KLHL3-201ENST00000309755 PLEKHO1Q53GL0 409 aaPredicted RBP12.99□□□□□ -0.33
KLHL3-201ENST00000309755 NUTM1Q86Y26 1132 aa12.99□□□□□ -0.33
KLHL3-201ENST00000309755 TRMT1Q9NXH9 659 aaKnown RBP12.99□□□□□ -0.33
KLHL3-201ENST00000309755 SSBP05455 408 aaKnown RBP eCLIP12.99□□□□□ -0.33
KLHL3-201ENST00000309755 SHTN1A0MZ66 631 aa12.99□□□□□ -0.33
KLHL3-201ENST00000309755 MYL6BP14649 208 aa12.99□□□□□ -0.33
KLHL3-201ENST00000309755 PIBF1Q8WXW3 757 aa12.98□□□□□ -0.33
KLHL3-201ENST00000309755 RBM42Q9BTD8 480 aaKnown RBP12.98□□□□□ -0.33
KLHL3-201ENST00000309755 NACAP1Q9BZK3 213 aa12.98□□□□□ -0.33
KLHL3-201ENST00000309755 USP25Q9UHP3 1055 aa12.98□□□□□ -0.33
KLHL3-201ENST00000309755 INCENPQ9NQS7 918 aa12.98□□□□□ -0.33
KLHL3-201ENST00000309755 TNNT1P13805 278 aa12.98□□□□□ -0.33
KLHL3-201ENST00000309755 C20orf194Q5TEA3 1177 aa12.98□□□□□ -0.33
KLHL3-201ENST00000309755 CLIP2Q9UDT6 1046 aa12.98□□□□□ -0.33
KLHL3-201ENST00000309755 SPDYE4A6NLX3 237 aa12.98□□□□□ -0.33
KLHL3-201ENST00000309755 SMARCA5O60264 1052 aaPredicted RBP12.98□□□□□ -0.33
KLHL3-201ENST00000309755 CDKL5O76039 1030 aa12.98□□□□□ -0.33
KLHL3-201ENST00000309755 TAF4BQ92750 862 aa12.98□□□□□ -0.33
KLHL3-201ENST00000309755 C16orf45Q96MC5 204 aaPredicted RBP12.98□□□□□ -0.33
KLHL3-201ENST00000309755 SCAPERQ9BY12 1400 aa12.98□□□□□ -0.33
KLHL3-201ENST00000309755 NCOA2Q15596 1464 aa12.98□□□□□ -0.33
KLHL3-201ENST00000309755 PPP4R3BQ5MIZ7 849 aa12.98□□□□□ -0.33
KLHL3-201ENST00000309755 RRBP1Q9P2E9 1410 aaKnown RBP12.98□□□□□ -0.33
KLHL3-201ENST00000309755 TNPO1Q92973 898 aaKnown RBP12.97□□□□□ -0.33
KLHL3-201ENST00000309755 GBP3Q9H0R5 595 aa12.97□□□□□ -0.33
KLHL3-201ENST00000309755 KIF2AO00139 706 aaPredicted RBP12.97□□□□□ -0.33
KLHL3-201ENST00000309755 SLFN5Q08AF3 891 aa12.97□□□□□ -0.33
KLHL3-201ENST00000309755 PAF1Q8N7H5 531 aa12.97□□□□□ -0.33
KLHL3-201ENST00000309755 PRAM1Q96QH2 718 aa12.97□□□□□ -0.33
KLHL3-201ENST00000309755 EXOC6BQ9Y2D4 811 aa12.97□□□□□ -0.33
KLHL3-201ENST00000309755 FYCO1Q9BQS8 1478 aa12.97□□□□□ -0.33
KLHL3-201ENST00000309755 KRI1Q8N9T8 703 aaKnown RBP12.97□□□□□ -0.33
KLHL3-201ENST00000309755 SOGA3Q5TF21 947 aa12.96□□□□□ -0.33
KLHL3-201ENST00000309755 DYDC1Q8WWB3 177 aa12.96□□□□□ -0.33
KLHL3-201ENST00000309755 TBC1D2Q9BYX2 928 aa12.96□□□□□ -0.33
KLHL3-201ENST00000309755 GBP2P32456 591 aaPredicted RBP12.96□□□□□ -0.33
KLHL3-201ENST00000309755 ZSCAN12O43309 604 aa12.96□□□□□ -0.33
KLHL3-201ENST00000309755 DDX54Q8TDD1 881 aaKnown RBP12.96□□□□□ -0.33
KLHL3-201ENST00000309755 KRT32Q14532 448 aa12.96□□□□□ -0.33
KLHL3-201ENST00000309755 GTF2F1P35269 517 aaKnown RBP eCLIP12.96□□□□□ -0.34
KLHL3-201ENST00000309755 KIF4BQ2VIQ3 1234 aa12.96□□□□□ -0.34
KLHL3-201ENST00000309755 CCDC113Q9H0I3 377 aa12.96□□□□□ -0.34
KLHL3-201ENST00000309755 CALCOCO1Q9P1Z2 691 aa12.96□□□□□ -0.34
KLHL3-201ENST00000309755 WDR97A6NE52 1622 aa12.95□□□□□ -0.34
KLHL3-201ENST00000309755 KIF5CO60282 957 aa12.95□□□□□ -0.34
KLHL3-201ENST00000309755 CCDC57Q2TAC2 916 aa12.95□□□□□ -0.34
KLHL3-201ENST00000309755 KLHL10Q6JEL2 608 aa12.95□□□□□ -0.34
KLHL3-201ENST00000309755 GNL3LQ9NVN8 582 aaKnown RBP12.95□□□□□ -0.34
KLHL3-201ENST00000309755 MAP2K1Q02750 393 aaPredicted RBP12.95□□□□□ -0.34
KLHL3-201ENST00000309755 CKAP2LQ8IYA6 745 aa12.95□□□□□ -0.34
KLHL3-201ENST00000309755 SPINK5Q9NQ38 1064 aaPredicted RBP12.95□□□□□ -0.34
KLHL3-201ENST00000309755 ANO10Q9NW15 660 aa12.95□□□□□ -0.34
KLHL3-201ENST00000309755 EZRP15311 586 aaKnown RBP12.95□□□□□ -0.34
KLHL3-201ENST00000309755 JAKMIP3Q5VZ66 844 aa12.95□□□□□ -0.34
KLHL3-201ENST00000309755 RAI14Q9P0K7 980 aa12.95□□□□□ -0.34
KLHL3-201ENST00000309755 TICAM2Q86XR7 235 aa12.95□□□□□ -0.34
KLHL3-201ENST00000309755 ZNF397Q8NF99 534 aaPredicted RBP12.95□□□□□ -0.34
KLHL3-201ENST00000309755 GOLGA6L10A0A0M3HER8 536 aa12.94□□□□□ -0.34
KLHL3-201ENST00000309755 TDO2P48775 406 aa12.94□□□□□ -0.34
KLHL3-201ENST00000309755 PRPF40BQ6NWY9 871 aaKnown RBP12.94□□□□□ -0.34
KLHL3-201ENST00000309755 UBAC1Q9BSL1 405 aa12.94□□□□□ -0.34
KLHL3-201ENST00000309755 TOP1P11387 765 aaKnown RBP12.94□□□□□ -0.34
KLHL3-201ENST00000309755 RPAP2Q8IXW5 612 aaPredicted RBP12.94□□□□□ -0.34
KLHL3-201ENST00000309755 ATF3P18847 181 aa12.94□□□□□ -0.34
KLHL3-201ENST00000309755 MAP9Q49MG5 647 aa12.94□□□□□ -0.34
KLHL3-201ENST00000309755 ERBINQ96RT1 1412 aa12.94□□□□□ -0.34
KLHL3-201ENST00000309755 RNF187Q5TA31 235 aaPredicted RBP12.94□□□□□ -0.34
KLHL3-201ENST00000309755 WWC2Q6AWC2 1192 aa12.94□□□□□ -0.34
KLHL3-201ENST00000309755 ZSCAN25Q6NSZ9 544 aa12.94□□□□□ -0.34
KLHL3-201ENST00000309755 GDPD2Q9HCC8 539 aa12.94□□□□□ -0.34
KLHL3-201ENST00000309755 CTNNA3Q9UI47 895 aa12.94□□□□□ -0.34
KLHL3-201ENST00000309755 GUCY1B3Q02153 619 aa12.93□□□□□ -0.34
KLHL3-201ENST00000309755 CABP1Q9NZU7 370 aa12.93□□□□□ -0.34
KLHL3-201ENST00000309755 GPATCH11Q8N954 259 aa12.93□□□□□ -0.34
KLHL3-201ENST00000309755 CDK19Q9BWU1 502 aa12.93□□□□□ -0.34
KLHL3-201ENST00000309755 BMP2KQ9NSY1 1161 aaPredicted RBP12.93□□□□□ -0.34
KLHL3-201ENST00000309755 SPA17Q15506 151 aa12.93□□□□□ -0.34
KLHL3-201ENST00000309755 SSR1P43307 286 aaKnown RBP12.93□□□□□ -0.34
KLHL3-201ENST00000309755 KLHL34Q8N239 644 aa12.93□□□□□ -0.34
KLHL3-201ENST00000309755 LARP6Q9BRS8 491 aaKnown RBP12.93□□□□□ -0.34
KLHL3-201ENST00000309755 BCCIPQ9P287 314 aaKnown RBP eCLIP12.93□□□□□ -0.34
KLHL3-201ENST00000309755 C11orf95C9JLR9 678 aaPredicted RBP12.93□□□□□ -0.34
KLHL3-201ENST00000309755 RBM27Q9P2N5 1060 aaKnown RBP12.93□□□□□ -0.34
KLHL3-201ENST00000309755 ADCY5O95622 1261 aa12.92□□□□□ -0.34
KLHL3-201ENST00000309755 DNA2P51530 1060 aa12.92□□□□□ -0.34
KLHL3-201ENST00000309755 IGF1RP08069 1367 aa12.92□□□□□ -0.34
KLHL3-201ENST00000309755 CPLX3Q8WVH0 158 aa12.92□□□□□ -0.34
KLHL3-201ENST00000309755 MX1P20591 662 aa12.92□□□□□ -0.34
KLHL3-201ENST00000309755 ZFP91Q96JP5 570 aaPredicted RBP12.92□□□□□ -0.34
KLHL3-201ENST00000309755 CEP131Q9UPN4 1083 aa12.92□□□□□ -0.34
KLHL3-201ENST00000309755 SLC26A8Q96RN1 970 aa12.91□□□□□ -0.34
KLHL3-201ENST00000309755 IMMTQ16891 758 aaKnown RBP12.91□□□□□ -0.34
KLHL3-201ENST00000309755 IPO4Q8TEX9 1081 aaKnown RBP12.91□□□□□ -0.34
KLHL3-201ENST00000309755 WASF1Q92558 559 aa12.91□□□□□ -0.34
KLHL3-201ENST00000309755 PDIA4P13667 645 aaKnown RBP12.91□□□□□ -0.34
KLHL3-201ENST00000309755 CABP4P57796 275 aa12.91□□□□□ -0.34
KLHL3-201ENST00000309755 RRS1Q15050 365 aaKnown RBP12.91□□□□□ -0.34
KLHL3-201ENST00000309755 SCAND2PQ9GZW5 306 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms